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Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890

June 2023 issue

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Cover illustration: Structures with more than one molecule in the asymmetric unit (Z′ > 1) are the exception rather than the rule, with the relative abundance dropping rapidly with increased Z′. The crystal structure of 5-(tri­fluoro­meth­yl)-1,3,4-thia­diazol-2(3H)-one reported in this issue has Z′ = 6, estimated to occur in only about 0.05% of structures. A Hirshfeld surface analysis indicates that all six molecules have similar packing environments within the crystal structure. See: Geetha, Mohan Kumar, Anil Kumar, Shreenivas, Basavaraju, Yathirajan & Parkin [Acta Cryst. (2023). E78, 557–561].

research communications


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The crystal structures of two benzo­thio­phene derivatives are described along with an analysis of the inter­molecular contacts in the crystals performed using Hirshfeld surface analysis and two-dimensional fingerprint plots.

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In the crystal, the mol­ecules are connected by N—H⋯N hydrogen bonds into dimers with an [R_{2}^{2}](12) motif, forming chains along the b-axis direction. These chains are linked to each other by N—H⋯N hydrogen bonds, N–H⋯π and π–π inter­actions, forming a three-dimensional network.

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The title aroylhydrazone ether exists in an E-configuration with respect to the double bond of the hydrazone bridge and with an ac­yl–hydrazone (—CH=N—NH—CO—) torsion angle of 166.0 (3)°. The mol­ecule exhibits a non-planar conformation, likely induced by packing requirements.

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The two polymorphic structures of 3-phenyl-1H-1,3-benzo­diazol-2(3H)-one (I and II) exhibit identical bond distances and angles except for the C—N—C—C torsion angle between the benzimidazolone backbone and the phenyl substituent, which has an effect on the crystal packing and supra­molecular features. The structure of I contains a stronger C=O⋯H—N hydrogen-bonding inter­action and a weaker π–π inter­action between adjacent bezimidazolone moieties in comparison to II.

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The title 4-amino­anti­pyrine Schiff base compounds both deviate from planarity with the phenyl ring and the substituted benzyl­idene ring being inclined to the pyrazole ring mean plane by 54.87 (7) and 22.92 (7)°, respectively, in the first compound and by 60.44 (8) and 12.70 (9)° in the second.

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The asymmetric unit of the title compound consists of two independent mol­ecules differing slightly in conformation and in their inter­molecular inter­actions in the solid.

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1-(4,5-Dimeth­oxy-2,3-di­nitro­phen­yl)-2-methyl­propyl butyl­carbamate, which affords butyl­amine on photoirradiation, was prepared by the reaction of 1-(4,5-dimeth­oxy-2,3-di­nitro­phen­yl)-2-methyl­propan-1-ol and butyl­iso­cyanate using di­butyl­tin dilaurate as a catalyst. Single crystals of the carbamate were grown in a 1:1 mixed solution of hexane and ethyl acetate. Two nitro groups and one meth­oxy group of the novel photo-protecting group were twisted out of the plane of the aromatic ring and inter­molecular hydrogen bonds are observed between carbamate moieties.

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The title mol­ecules were synthesized by alkyl­ation of 5-[(4-di­methyl­amino)­phen­yl]-1,3,4-oxa­diazole-2-thiol. In the crystals, C–H⋯π inter­actions are observed between neighboring mol­ecules. Hirshfeld surface analysis indicates that H⋯H and H⋯C/C⋯H inter­actions make the most important contributions to the crystal packing.

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The synthesis and crystal structure of 5-(tri­fluoro­meth­yl)-1,3,4-thia­diazol-2(3H)-one, a heterocycle of importance as a pharmaceutical building block, are presented.

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The title compound can be described as a salt (HL)+(Gal) (L = 1,3-bis­(benzimidazol-2-yl)propane (L); HGal = gallic acid) co-crystallized with a neutral mol­ecule L. The crystal also comprises disordered solvent ethyl acetate mol­ecules.

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In the crystal, inter­molecular N—H⋯O and C—H⋯O hydrogen bonds connect mol­ecules into chains along the b-axis direction through the dimethyl sulfoxide solvent mol­ecule, forming C(10)[R_{1}^{2}](6) motifs. These chains are connected via S—O⋯π inter­actions, π–π stacking inter­actions and van der Waals inter­actions.

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In the crystal structure of the title compound, the packing is driven by C—H⋯F, N—H⋯O and C—H⋯π contacts. Hirshfeld surface analysis showed that the largest contribution to the surface contacts arise from F⋯H/H⋯F inter­actions.

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The title compound is a phthalimide-protected polyamine with a protonated central nitro­gen atom. The crystal packing features a hydrogen-bond network, a two-coordinated chloride ion, and off-set π–π stacking.

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Research communications

Research communications are designed to help authors bring out the science behind their structure determinations. Authors are encouraged to report more than one structure in the same communication and also to include the results of investigations with other techniques. The Research communications format makes Acta E the natural home for structure determinations with interesting science to report.

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