organic compounds
2-Chloro-4-hydroxyanilinium chloride
aDepartment of Environmental Toxicology, Southern University and A&M College, Baton Rouge, Louisiana 70813, USA, bDepartment of Mechanical Engineering, Southern University and A&M College, Baton, Rouge, Louisiana 70813, USA, cDepartment of Mechanical and Industrial Engineering, Louisiana State University, Baton Rouge, Louisiana 70803, USA, and dDepartment of Chemistry, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
*Correspondence e-mail: [email protected]
The title compound, C6H7ClNO+·Cl−, crystallizes in orthorhombic space group Pnma with both cations and anions lying on a mirror plane in the crystal. The C—Cl distance is 1.7289 (6) Å, the C—N distance is 1.4590 (8) Å, and the C—O distance is 1.3617 (8) Å. Parallel molecules form stacks with interplanar spacing 3.1473 (2) Å, but slipped by 1.97 Å. The NH3+ substituent donates three intermolecular hydrogen bonds to chloride ions having N⋯Cl distances in the range 3.1514 (6)–3.3019 (2) Å, and the OH group donates an intermolecular hydrogen bond to chloride with O⋯Cl distance 3.0671 (6) Å. The chloro substituent and OH group do not accept hydrogen bonds from NH or OH.
Keywords: crystal structure; 4-amino-3-chloroaniline; lenvatinib and tivozanib; tyrosine kinase inhibitors; anticancer drugs and intermediates.
CCDC reference: 2495195
Structure description
4-Hydroxy-2-chloroanilinium chloride is the hydrochloride salt form of the well-established intermediate 4-amino-3-chlorophenol. This compound occupies a central role in pharmaceutical chemistry as a key starting material in the large-scale synthesis of the multikinase inhibitors lenvatinib and tivozanib, which act primarily through potent inhibition of vascular endothelial growth factor receptor (VEGFR) signaling pathways (CN 104326924 A, 2015
; EP 3620452A1, 2020
; Nair et al., 2015
). The simultaneous presence of an aniline amino and a phenolic hydroxyl group renders this scaffold a privileged synthon, particularly suited for the preparation of phenoxy-anilide derivatives. Such derivatives have been widely adopted in kinase inhibitor design and continue to attract attention as versatile structural motifs for next generation anticancer therapeutics (Kumar et al., 2015
).
Structural biology investigations have demonstrated that the phenoxy-anilide fragment derived from this intermediate is a critical determinant of VEGFR binding. In lenvatinib, this fragment stabilizes occupancy within the ATP-binding site and an adjacent hydrophobic pocket of VEGFR2 (Pan et al., 2021
; Okamoto et al., 2014
; Yamamoto et al., 2014
), thereby enabling potent inhibition across VEGFR1–3 as well as FGFR1–4. Tivozanib employs the same pharmacophore unit to achieve selective kinase blockade (CN 104326924A, 2015
). Beyond these clinical examples, the scaffold continues to be featured in discovery libraries and in the design of dual-target inhibitors. Recent advances have further enhanced its industrial relevance, with continuous-flow synthetic routes improving both safety and efficiency (CN 107739313A, 2020
).
Against this background, it was considered that the crystal structure of 4-amino-3-chlorophenol hydrochloride would provide valuable insights into its molecular conformation, hydrogen-bonding patterns, and supramolecular packing. These structural parameters are expected not only to clarify the stability of the salt form, but also to rationalize its synthetic utility in downstream coupling reactions. In view of its broad applications to mechanistic understanding and its potential for new drug development, we therefore undertook an X-ray diffraction study of the title compound at 100 K.
The ellipsoids and atom numbering are shown in Fig. 1
. Both cations and anions lie on a mirror plane, thus, except for two ammonium H atoms related by the mirror, the cation is rigorously planar, and all cations are parallel. This is shown in Fig. 2
, a view of the unit cell down the c axis. The interplanar spacing is half the b axial length, 3.1473 (2) Å, but cations related by an inversion center are horizontally slipped by 1.97 Å, as shown in the view down the b axis, Fig. 3
.
| Figure 1 The asymmetric unit of the title compound with 50% displacement ellipsoids. |
| | Figure 2 A view of the unit-cell contents, in projection down the c axis. |
| | Figure 3 A view of the unit-cell contents, in projection down the b axis. |
Hydrogen bonding from both the NH3+ and OH donors involve chloride only as the acceptor, not the chloro substituent nor the OH group. As shown in Fig. 4
, the ammonium group donates to three different chloride ions, and the OH group donates to a fourth. Thus, chloride accepts four hydrogen bonds from NH and OH. There are longer C—H⋯Cl interactions to both chloride and the chloro substituent, as detailed in Table 1
.
|
| Figure 4 Hydrogen bonding shown as dashed bonds. |
Synthesis and crystallization
4-Hydroxy-2-chloroanilinium chloride (CAS 52671–64-4; purity: 98%) was obtained from AmBeed, Buffalo Grove, IL and was used without further purification. Crystallization was performed in ethanol by slow cooling of a hot, nearly The sample was clarified by filtration using Whatman #1 filter paper. Single crystals of the title compound were colorless needles.
Refinement
Crystal data, data collection and structure details are summarized in Table 2
. Three reflections were omitted because of beamstop problems.
|
Structural data
CCDC reference: 2495195
contains datablock I. DOI: https://doi.org/10.1107/S2414314625008934/tk4119sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314625008934/tk4119Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2414314625008934/tk4119Isup3.cml
| C6H7ClNO+·Cl− | Dx = 1.628 Mg m−3 |
| Mr = 180.03 | Ag Kα radiation, λ = 0.56086 Å |
| Orthorhombic, Pnma | Cell parameters from 9968 reflections |
| a = 15.5044 (4) Å | θ = 3.0–35.2° |
| b = 6.2945 (2) Å | µ = 0.41 mm−1 |
| c = 7.5260 (2) Å | T = 100 K |
| V = 734.48 (4) Å3 | Needle fragment, colourless |
| Z = 4 | 0.28 × 0.20 × 0.15 mm |
| F(000) = 368 |
| Bruker D8 Venture DUO with Photon III C14 diffractometer | 3193 reflections with I > 2σ(I) |
| Radiation source: IµS 3.0 microfocus | Rint = 0.053 |
| φ and ω scans | θmax = 35.8°, θmin = 3.0° |
| Absorption correction: multi-scan (SADABS; Krause et al., 2015) | h = −32→32 |
| Tmin = 0.881, Tmax = 0.940 | k = −13→11 |
| 41806 measured reflections | l = −14→15 |
| 3668 independent reflections |
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: mixed |
| wR(F2) = 0.089 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.05 | w = 1/[σ2(Fo2) + (0.0489P)2 + 0.0955P] where P = (Fo2 + 2Fc2)/3 |
| 3668 reflections | (Δ/σ)max = 0.001 |
| 68 parameters | Δρmax = 0.98 e Å−3 |
| 1 restraint | Δρmin = −0.50 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. All H atoms were located in difference maps and those on C were thereafter treated as riding in geometrically idealized positions with C—H distances of 0.95 Å. The coordinates of the N—H and O—H hydrogen atoms were refined, with the O—H distance restrained to 0.85 Å. Uiso(H) values were assigned as 1.2Ueq for the attached atom (1.5 for NH3 and OH). |
| x | y | z | Uiso*/Ueq | ||
| Cl1 | 0.41328 (2) | 0.750000 | −0.01348 (2) | 0.01726 (4) | |
| O1 | 0.65937 (3) | 0.750000 | 0.42625 (8) | 0.01557 (9) | |
| H1 | 0.6701 (10) | 0.750000 | 0.5329 (19) | 0.023* | |
| N1 | 0.30340 (4) | 0.750000 | 0.30926 (8) | 0.01320 (8) | |
| H1N | 0.2875 (7) | 0.857 (2) | 0.2467 (14) | 0.020* | |
| H2N | 0.2735 (10) | 0.750000 | 0.412 (2) | 0.020* | |
| C1 | 0.39608 (4) | 0.750000 | 0.34282 (8) | 0.01067 (8) | |
| C2 | 0.45356 (4) | 0.750000 | 0.20074 (8) | 0.01172 (8) | |
| C3 | 0.54184 (4) | 0.750000 | 0.22936 (8) | 0.01262 (9) | |
| H3 | 0.580887 | 0.750000 | 0.132087 | 0.015* | |
| C4 | 0.57223 (4) | 0.750000 | 0.40361 (8) | 0.01128 (8) | |
| C5 | 0.51515 (4) | 0.750000 | 0.54682 (8) | 0.01106 (8) | |
| H5 | 0.536501 | 0.750000 | 0.665132 | 0.013* | |
| C6 | 0.42714 (4) | 0.750000 | 0.51543 (8) | 0.01064 (8) | |
| H6 | 0.387967 | 0.750000 | 0.612496 | 0.013* | |
| Cl2 | 0.20751 (2) | 0.750000 | 0.67846 (2) | 0.01519 (4) |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cl1 | 0.01969 (8) | 0.02336 (9) | 0.00874 (6) | 0.000 | −0.00069 (4) | 0.000 |
| O1 | 0.00992 (15) | 0.0218 (2) | 0.01502 (19) | 0.000 | 0.00072 (13) | 0.000 |
| N1 | 0.01106 (17) | 0.0165 (2) | 0.01204 (18) | 0.000 | −0.00098 (14) | 0.000 |
| C1 | 0.01023 (17) | 0.0120 (2) | 0.00982 (18) | 0.000 | 0.00045 (14) | 0.000 |
| C2 | 0.0131 (2) | 0.0133 (2) | 0.00879 (17) | 0.000 | 0.00073 (15) | 0.000 |
| C3 | 0.0121 (2) | 0.0145 (2) | 0.01128 (19) | 0.000 | 0.00239 (15) | 0.000 |
| C4 | 0.01043 (17) | 0.01161 (19) | 0.0118 (2) | 0.000 | 0.00095 (14) | 0.000 |
| C5 | 0.01029 (17) | 0.0120 (2) | 0.01085 (18) | 0.000 | 0.00049 (14) | 0.000 |
| C6 | 0.01086 (18) | 0.0119 (2) | 0.00919 (18) | 0.000 | 0.00044 (13) | 0.000 |
| Cl2 | 0.01500 (7) | 0.01586 (7) | 0.01472 (7) | 0.000 | 0.00405 (4) | 0.000 |
| Cl1—C2 | 1.7289 (6) | C1—C2 | 1.3919 (8) |
| O1—C4 | 1.3617 (8) | C2—C3 | 1.3856 (9) |
| O1—H1 | 0.820 (14) | C3—C4 | 1.3935 (9) |
| N1—C1 | 1.4590 (8) | C3—H3 | 0.9500 |
| N1—H1N | 0.856 (12) | C4—C5 | 1.3946 (8) |
| N1—H2N | 0.899 (15) | C5—C6 | 1.3848 (8) |
| N1—H1Ni | 0.856 (12) | C5—H5 | 0.9500 |
| C1—C6 | 1.3854 (8) | C6—H6 | 0.9500 |
| C4—O1—H1 | 108.8 (12) | C2—C3—C4 | 118.71 (6) |
| C1—N1—H1N | 112.3 (7) | C2—C3—H3 | 120.6 |
| C1—N1—H2N | 111.1 (10) | C4—C3—H3 | 120.6 |
| H1N—N1—H2N | 108.8 (9) | O1—C4—C3 | 116.96 (6) |
| C1—N1—H1Ni | 112.3 (7) | O1—C4—C5 | 122.20 (6) |
| H1N—N1—H1Ni | 103.2 (15) | C3—C4—C5 | 120.84 (6) |
| H2N—N1—H1Ni | 108.8 (9) | C6—C5—C4 | 119.57 (6) |
| C6—C1—C2 | 119.86 (6) | C6—C5—H5 | 120.2 |
| C6—C1—N1 | 120.31 (5) | C4—C5—H5 | 120.2 |
| C2—C1—N1 | 119.84 (5) | C5—C6—C1 | 120.16 (5) |
| C3—C2—C1 | 120.86 (6) | C5—C6—H6 | 119.9 |
| C3—C2—Cl1 | 120.12 (5) | C1—C6—H6 | 119.9 |
| C1—C2—Cl1 | 119.02 (5) |
| Symmetry code: (i) x, −y+3/2, z. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1···Cl2ii | 0.82 (1) | 2.25 (1) | 3.0671 (6) | 177 (2) |
| N1—H1N···Cl2iii | 0.856 (12) | 2.531 (13) | 3.3019 (2) | 150.4 (10) |
| N1—H2N···Cl2 | 0.90 (2) | 2.25 (2) | 3.1514 (6) | 176 (1) |
| C5—H5···Cl2ii | 0.95 | 2.90 | 3.6290 (6) | 134 |
| C6—H6···Cl1iv | 0.95 | 2.84 | 3.5519 (6) | 132 |
| C6—H6···Cl2 | 0.95 | 2.84 | 3.6195 (6) | 140 |
| C6—H6···Cl1iv | 0.95 | 2.84 | 3.5519 (6) | 132 |
| Symmetry codes: (ii) x+1/2, y, −z+3/2; (iii) −x+1/2, −y+2, z−1/2; (iv) x, y, z+1. |
Funding information
The authors acknowledge support from the National Institute of General Medical Sciences of the National Institutes of Health (P20 GM103424–21), the US Department of Education (P031B040030), and the National Science Foundation (2418415 RII FEC and CHE-2215262). The contents of this manuscript are solely the responsibility of the authors and do not represent the official views of these funding agencies.
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