organic compounds
N′-(2,6-Dimethylphenyl)-N-phenylmethanimidamide
aDépartement de chimie, Université de Montréal, Complexe des sciences, 1375, Avenue Thérèse-Lavoie-Roux, Montréal, Québec, H2V 0B3, Canada, and bDépartement de biochimie, chimie, physique et science forensique and l'Institut de recherche sur l'hydrogène, Université du Québec à Trois-Rivières, 3351, boul. des Forges, CP 500, Trois-Rivières, Québec, G9A 5H7, Canada
*Correspondence e-mail: [email protected]
The title compound, C16H18N2, is a non-symmetrically N,N′-disubstituted acetamidine having a phenyl and a bulky 2,6-dimethylphenyl as substituents on the two N atoms of the N—C—N linkage. It crystallizes in an E-syn configuration and its amidine C—N bonds present distinct amine [1.366 (1) Å] and imine [1.288 (1) Å] bond lengths. In the extended structure, strong N—H⋯N hydrogen bonds link the molecules into infinite C(4) chains propagating along the c-axis direction; weak C—H⋯π interactions are also present in the crystal packing.
Keywords: crystal structure; acetamidine; hydrogen bonding.
CCDC reference: 2492957
Structure description
The molecular structure of the title compound, C16H18N2 (1) (Fig. 1
) was determined at 100 K. Compound 1 was obtained as a result of a test reaction for synthesizing non-symmetrical under microwave activation by sequential introduction of the N-substituents, with the final goal to serve as precursor for the corresponding amidine-N-oxide/hydroxyamidine derivative (Cibian et al., 2011
; Saha et al., 2024
). Although crystallographic evidence of various non-symmetric acetamidines with N,N′-bisarylamidines exists (e.g., Stibrany & Potenza, 2007
; Peoples et al., 2012
), this is the first report of 1, an acetamidine having a phenyl and a bulky 2,6-dimethylphenyl as substituents on the two N atoms of the N—C—N linkage. It crystallizes in the monoclinic P21/c in the E-syn configuration (Kalz et al., 2016
). Its amidine C—N bonds present distinct amine [1.366 (1) Å] and imine [1.288 (1) Å] bond lengths, as also found for N,N′-disubstituted arylamidine (Boeré et al., 1998
; Cottin et al., 2021
). The phenyl and 2,6-dimethylphenyl groups are positioned on the amine and imine N atoms, respectively.
| Figure 1 The molecular structure of 1, with displacement ellipsoids drawn at 50% probability level. |
In 1, the bulky substituted C9–C14 aryl ring and the C3–C8 phenyl ring subtend tilt angles of 85.3 (1) and 40.4 (1)°, respectively, with the N1—C1—N2 plane; the pendant rings are tilted by 64.3 (1)° with respect to each other. The C3—N1—C1—N2 and N1—C1—N2—C9 torsion angles are −11.33 (18) and 176.57 (10)°, respectively.
In the extended structure of 1 (Table 1
and Figs. 2
and 3
), the molecules are linked by N—H⋯N strong hydrogen bonds (Desiraju & Steiner, 2001
) between the amidine H1 proton and the N2 atom of the amidine unit in an adjacent molecule, thereby forming infinite C(4) chains of molecules propagating along the c-axis direction. Weak C—H⋯π interactions (Desiraju & Steiner, 2001
) complete the crystal packing.
|
| Figure 2 Part of a [001] hydrogen-bonded chain in the extended structure of 1. |
| | Figure 3 View of the crystal packing of 1 in the unit cell. |
Synthesis and crystallization
A microwave vial was charged with 600 mg of 4 Å molecular sieves, triethylorthoacetate (1.5 ml, 8.18 mmol, 1 equiv.), 2 drops of acetic acid, and aniline (0.75 ml, 8.18 mmol, 1 equiv.). The reaction was conducted under microwave irradiation at 90 °C for 10 min. After cooling down, 2,6-dimethylanilline (1.01 ml, 8.18 mmol, 1 equiv.) was added to the crude reaction mixture and the reaction was continued at 90 °C for another 16 h. Part of the reaction mixture was taken in hexane (the molecular sieves were removed by filtration) and the solution was placed in the freezer (−10 °C). XRD-quality colorless crystals were obtained (0.50 g, 2.10 mmol, partial yield: 26% – only part of the product was purified).
1H NMR (400 MHz, DMSO-d6): 1.69 (s, 3H); 1.99 (s, 6H), 6.76 (t, J = 7.5 Hz, 1H), 6.91 (t, J = 7.3 Hz, 1H), 6.98 (d, J = 7.5 Hz, 2H), 7.25 (t, J = 7.5 Hz, 2H), 7.82 (d, J =7.9 Hz, 2H), 8.87 (s, 1H, NH). 13C NMR (100 MHz, DMSO-d6): 17.9, 18.0, 118.7, 121.0, 121.1, 127.0, 127.5, 128.2, 141.4, 148.5, 152.2 (N—C=N). Elemental analysis C/H/N: calculated (%) for C16H18N2: C 80.63, H 7.61, N 11.75; exp .: C 80.57, H 7.56, N 11.81. HRMS (ESI, positive): m/z [M + H]+ calculated: 239.15428; exp .: 239.15398 (diff. 1.25 p.p.m.).
Refinement
Crystal data, data collection and structure details are summarized in Table 2
.
|
Structural data
CCDC reference: 2492957
contains datablock I. DOI: https://doi.org/10.1107/S2414314625008673/hb4536sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314625008673/hb4536Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2414314625008673/hb4536Isup3.cml
| C16H18N2 | F(000) = 512 |
| Mr = 238.32 | Dx = 1.160 Mg m−3 |
| Monoclinic, P21/c | Cu Kα radiation, λ = 1.54178 Å |
| a = 7.2094 (1) Å | Cell parameters from 7241 reflections |
| b = 21.3517 (4) Å | θ = 4.1–70.8° |
| c = 8.9033 (2) Å | µ = 0.53 mm−1 |
| β = 95.418 (1)° | T = 100 K |
| V = 1364.39 (4) Å3 | Needle, colourless |
| Z = 4 | 0.21 × 0.04 × 0.01 × 0.01 (radius) mm |
| Bruker SMART APEXII CCD diffractometer | 2595 independent reflections |
| Radiation source: microfocus sealed X-ray tube, Incoatec Iµs | 2160 reflections with I > 2σ(I) |
| Mirror optics monochromator | Rint = 0.030 |
| Detector resolution: 7.9 pixels mm-1 | θmax = 71.0°, θmin = 4.1° |
| ω and φ scans | h = −8→8 |
| Absorption correction: for a sphere (SADABS; Krause et al., 2015) | k = −26→26 |
| Tmin = 0.807, Tmax = 0.993 | l = −10→10 |
| 21279 measured reflections |
| Refinement on F2 | Primary atom site location: dual |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.038 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.113 | w = 1/[σ2(Fo2) + (0.0716P)2 + 0.0724P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.08 | (Δ/σ)max < 0.001 |
| 2595 reflections | Δρmax = 0.28 e Å−3 |
| 170 parameters | Δρmin = −0.27 e Å−3 |
| 0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. H atoms were included in calculated positions (C—H = 0.95–0.98 Å) and treated as riding atoms with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(methyl C). The NH proton (H1) was located in the difference-Fourier map and refined freely. |
| x | y | z | Uiso*/Ueq | ||
| N1 | 0.67938 (14) | 0.76538 (4) | 1.09532 (11) | 0.0191 (2) | |
| H1 | 0.660 (2) | 0.7773 (7) | 1.1875 (16) | 0.030 (4)* | |
| N2 | 0.62606 (14) | 0.68830 (4) | 0.91279 (11) | 0.0180 (2) | |
| C1 | 0.61447 (16) | 0.70782 (5) | 1.04845 (12) | 0.0174 (3) | |
| C2 | 0.52870 (19) | 0.67095 (6) | 1.16869 (13) | 0.0233 (3) | |
| H2A | 0.417882 | 0.648897 | 1.123623 | 0.035* | |
| H2B | 0.493168 | 0.699538 | 1.247175 | 0.035* | |
| H2C | 0.619298 | 0.640440 | 1.213416 | 0.035* | |
| C3 | 0.79195 (17) | 0.80654 (5) | 1.01846 (12) | 0.0185 (3) | |
| C4 | 0.77137 (17) | 0.87086 (5) | 1.04025 (13) | 0.0209 (3) | |
| H4 | 0.677614 | 0.885791 | 1.099341 | 0.025* | |
| C5 | 0.88698 (18) | 0.91300 (6) | 0.97613 (14) | 0.0252 (3) | |
| H5 | 0.873702 | 0.956622 | 0.993177 | 0.030* | |
| C6 | 1.02225 (19) | 0.89181 (6) | 0.88702 (14) | 0.0295 (3) | |
| H6 | 1.101809 | 0.920649 | 0.843217 | 0.035* | |
| C7 | 1.03948 (19) | 0.82817 (7) | 0.86297 (15) | 0.0298 (3) | |
| H7 | 1.130352 | 0.813541 | 0.800713 | 0.036* | |
| C8 | 0.92670 (17) | 0.78530 (6) | 0.92795 (14) | 0.0237 (3) | |
| H8 | 0.941096 | 0.741724 | 0.910947 | 0.028* | |
| C9 | 0.56482 (17) | 0.62633 (5) | 0.87387 (12) | 0.0184 (3) | |
| C10 | 0.38863 (17) | 0.61776 (6) | 0.79602 (13) | 0.0218 (3) | |
| C11 | 0.33856 (19) | 0.55810 (6) | 0.74243 (14) | 0.0274 (3) | |
| H11 | 0.219225 | 0.551720 | 0.689757 | 0.033* | |
| C12 | 0.4601 (2) | 0.50815 (6) | 0.76486 (15) | 0.0299 (3) | |
| H12 | 0.424966 | 0.467915 | 0.726479 | 0.036* | |
| C13 | 0.6326 (2) | 0.51699 (6) | 0.84329 (14) | 0.0267 (3) | |
| H13 | 0.714719 | 0.482358 | 0.859959 | 0.032* | |
| C14 | 0.68861 (17) | 0.57583 (6) | 0.89848 (13) | 0.0220 (3) | |
| C15 | 0.25781 (19) | 0.67238 (6) | 0.76836 (16) | 0.0292 (3) | |
| H15A | 0.134837 | 0.657116 | 0.728148 | 0.044* | |
| H15B | 0.306460 | 0.700987 | 0.695456 | 0.044* | |
| H15C | 0.246968 | 0.694588 | 0.863457 | 0.044* | |
| C16 | 0.87995 (19) | 0.58474 (6) | 0.97859 (16) | 0.0314 (3) | |
| H16A | 0.963149 | 0.551898 | 0.947325 | 0.047* | |
| H16B | 0.873019 | 0.582271 | 1.087825 | 0.047* | |
| H16C | 0.928376 | 0.625855 | 0.952801 | 0.047* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| N1 | 0.0265 (5) | 0.0145 (5) | 0.0167 (5) | −0.0016 (4) | 0.0034 (4) | −0.0011 (4) |
| N2 | 0.0220 (5) | 0.0134 (5) | 0.0184 (5) | −0.0002 (4) | 0.0011 (4) | 0.0001 (4) |
| C1 | 0.0194 (6) | 0.0135 (6) | 0.0189 (6) | 0.0017 (4) | 0.0004 (4) | 0.0014 (4) |
| C2 | 0.0329 (7) | 0.0174 (6) | 0.0201 (6) | −0.0040 (5) | 0.0052 (5) | −0.0003 (4) |
| C3 | 0.0209 (6) | 0.0173 (6) | 0.0166 (6) | −0.0025 (4) | −0.0019 (5) | 0.0011 (4) |
| C4 | 0.0260 (6) | 0.0174 (6) | 0.0187 (6) | −0.0006 (5) | −0.0007 (5) | −0.0001 (4) |
| C5 | 0.0333 (7) | 0.0177 (6) | 0.0236 (6) | −0.0055 (5) | −0.0027 (5) | 0.0023 (4) |
| C6 | 0.0324 (7) | 0.0292 (7) | 0.0269 (7) | −0.0119 (6) | 0.0027 (6) | 0.0040 (5) |
| C7 | 0.0263 (7) | 0.0335 (8) | 0.0307 (7) | −0.0045 (6) | 0.0081 (6) | −0.0017 (5) |
| C8 | 0.0237 (6) | 0.0200 (6) | 0.0275 (6) | 0.0004 (5) | 0.0027 (5) | −0.0014 (5) |
| C9 | 0.0261 (6) | 0.0148 (6) | 0.0148 (6) | −0.0012 (5) | 0.0044 (5) | 0.0005 (4) |
| C10 | 0.0262 (6) | 0.0171 (6) | 0.0223 (6) | −0.0005 (5) | 0.0026 (5) | −0.0002 (4) |
| C11 | 0.0314 (7) | 0.0216 (7) | 0.0278 (7) | −0.0049 (5) | −0.0041 (5) | −0.0020 (5) |
| C12 | 0.0444 (8) | 0.0156 (6) | 0.0287 (7) | −0.0032 (6) | −0.0006 (6) | −0.0034 (5) |
| C13 | 0.0396 (8) | 0.0150 (6) | 0.0251 (6) | 0.0051 (5) | 0.0007 (6) | 0.0007 (5) |
| C14 | 0.0292 (7) | 0.0184 (6) | 0.0184 (6) | 0.0016 (5) | 0.0022 (5) | 0.0019 (4) |
| C15 | 0.0257 (7) | 0.0249 (7) | 0.0361 (8) | 0.0019 (5) | −0.0023 (6) | −0.0032 (5) |
| C16 | 0.0322 (7) | 0.0240 (7) | 0.0368 (8) | 0.0059 (5) | −0.0036 (6) | −0.0018 (5) |
| N1—H1 | 0.882 (15) | C8—H8 | 0.9500 |
| N1—C1 | 1.3663 (15) | C9—C10 | 1.4004 (17) |
| N1—C3 | 1.4157 (15) | C9—C14 | 1.4036 (16) |
| N2—C1 | 1.2879 (14) | C10—C11 | 1.3957 (17) |
| N2—C9 | 1.4272 (14) | C10—C15 | 1.5055 (17) |
| C1—C2 | 1.5078 (15) | C11—H11 | 0.9500 |
| C2—H2A | 0.9800 | C11—C12 | 1.3826 (19) |
| C2—H2B | 0.9800 | C12—H12 | 0.9500 |
| C2—H2C | 0.9800 | C12—C13 | 1.3810 (19) |
| C3—C4 | 1.3967 (16) | C13—H13 | 0.9500 |
| C3—C8 | 1.3952 (17) | C13—C14 | 1.3946 (17) |
| C4—H4 | 0.9500 | C14—C16 | 1.5040 (18) |
| C4—C5 | 1.3857 (17) | C15—H15A | 0.9800 |
| C5—H5 | 0.9500 | C15—H15B | 0.9800 |
| C5—C6 | 1.3897 (19) | C15—H15C | 0.9800 |
| C6—H6 | 0.9500 | C16—H16A | 0.9800 |
| C6—C7 | 1.3830 (19) | C16—H16B | 0.9800 |
| C7—H7 | 0.9500 | C16—H16C | 0.9800 |
| C7—C8 | 1.3865 (18) | ||
| C1—N1—H1 | 117.7 (10) | C10—C9—N2 | 119.12 (10) |
| C1—N1—C3 | 127.32 (10) | C10—C9—C14 | 120.70 (11) |
| C3—N1—H1 | 114.6 (10) | C14—C9—N2 | 119.79 (11) |
| C1—N2—C9 | 118.81 (9) | C9—C10—C15 | 120.32 (11) |
| N1—C1—C2 | 113.86 (10) | C11—C10—C9 | 118.79 (11) |
| N2—C1—N1 | 121.80 (10) | C11—C10—C15 | 120.88 (12) |
| N2—C1—C2 | 124.34 (10) | C10—C11—H11 | 119.5 |
| C1—C2—H2A | 109.5 | C12—C11—C10 | 120.98 (12) |
| C1—C2—H2B | 109.5 | C12—C11—H11 | 119.5 |
| C1—C2—H2C | 109.5 | C11—C12—H12 | 120.1 |
| H2A—C2—H2B | 109.5 | C13—C12—C11 | 119.72 (12) |
| H2A—C2—H2C | 109.5 | C13—C12—H12 | 120.1 |
| H2B—C2—H2C | 109.5 | C12—C13—H13 | 119.4 |
| C4—C3—N1 | 118.03 (11) | C12—C13—C14 | 121.21 (12) |
| C8—C3—N1 | 122.65 (11) | C14—C13—H13 | 119.4 |
| C8—C3—C4 | 119.25 (11) | C9—C14—C16 | 121.20 (11) |
| C3—C4—H4 | 119.8 | C13—C14—C9 | 118.58 (12) |
| C5—C4—C3 | 120.35 (12) | C13—C14—C16 | 120.20 (11) |
| C5—C4—H4 | 119.8 | C10—C15—H15A | 109.5 |
| C4—C5—H5 | 119.8 | C10—C15—H15B | 109.5 |
| C4—C5—C6 | 120.37 (12) | C10—C15—H15C | 109.5 |
| C6—C5—H5 | 119.8 | H15A—C15—H15B | 109.5 |
| C5—C6—H6 | 120.4 | H15A—C15—H15C | 109.5 |
| C7—C6—C5 | 119.10 (12) | H15B—C15—H15C | 109.5 |
| C7—C6—H6 | 120.4 | C14—C16—H16A | 109.5 |
| C6—C7—H7 | 119.4 | C14—C16—H16B | 109.5 |
| C6—C7—C8 | 121.28 (12) | C14—C16—H16C | 109.5 |
| C8—C7—H7 | 119.4 | H16A—C16—H16B | 109.5 |
| C3—C8—H8 | 120.2 | H16A—C16—H16C | 109.5 |
| C7—C8—C3 | 119.62 (12) | H16B—C16—H16C | 109.5 |
| C7—C8—H8 | 120.2 | ||
| N1—C3—C4—C5 | 175.50 (11) | C5—C6—C7—C8 | −1.1 (2) |
| N1—C3—C8—C7 | −176.26 (11) | C6—C7—C8—C3 | 0.5 (2) |
| N2—C9—C10—C11 | 172.39 (10) | C8—C3—C4—C5 | −1.79 (17) |
| N2—C9—C10—C15 | −6.41 (17) | C9—N2—C1—N1 | 176.57 (10) |
| N2—C9—C14—C13 | −172.50 (10) | C9—N2—C1—C2 | −4.01 (17) |
| N2—C9—C14—C16 | 5.76 (17) | C9—C10—C11—C12 | −0.21 (19) |
| C1—N1—C3—C4 | 149.38 (11) | C10—C9—C14—C13 | 0.23 (18) |
| C1—N1—C3—C8 | −33.43 (18) | C10—C9—C14—C16 | 178.49 (11) |
| C1—N2—C9—C10 | 100.22 (13) | C10—C11—C12—C13 | 1.0 (2) |
| C1—N2—C9—C14 | −86.95 (14) | C11—C12—C13—C14 | −1.1 (2) |
| C3—N1—C1—N2 | −11.33 (18) | C12—C13—C14—C9 | 0.53 (19) |
| C3—N1—C1—C2 | 169.20 (11) | C12—C13—C14—C16 | −177.75 (12) |
| C3—C4—C5—C6 | 1.26 (18) | C14—C9—C10—C11 | −0.38 (18) |
| C4—C3—C8—C7 | 0.89 (18) | C14—C9—C10—C15 | −179.18 (11) |
| C4—C5—C6—C7 | 0.17 (19) | C15—C10—C11—C12 | 178.58 (12) |
| Cg1 and Cg2 are the centroids of the C3–C8 phenyl and C9–C14 2,6-dimethylphenyl rings, respectively. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1···N2i | 0.882 (15) | 2.172 (15) | 3.0530 (14) | 176.3 (14) |
| C2—H2C···Cg1i | 0.98 | 2.83 | 3.5601 (14) | 132 |
| C4—H4···Cg2i | 0.95 | 2.59 | 3.5092 (13) | 162 |
| C15—H15A···Cg1ii | 0.98 | 2.83 | 3.6346 (15) | 140 |
| Symmetry codes: (i) x, −y+3/2, z+1/2; (ii) x−1, −y+3/2, z−1/2. |
Acknowledgements
We thank the personnel from the XRD facilities of Université de Montréal. Professor Frank Schaper and Dr Daniel Chartrand are acknowledged for the crystallographic course and training.
Funding information
Funding for this research was provided by: Natural Sciences and Engineering Research Council of Canada (NSERC); Fonds de recherche du Québec – Nature et technologies (FRQ-NT); Quebec Centre for Advanced Materials (QCAM); Centre in Green Chemistry and Catalysis (CGCC); Université de Montréal (UdeM); Université du Québec à Trois-Rivières (UQTR) ; l'Institut de recherche sur l'hydrogène (IRH).
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