organic compounds
1-(Hex-5-en-1-yl)-4-{[3-methyl-2,3-dihydro-1,3-benzothiazol-2-ylidene]methyl}quinolin-1-ium iodide monohydrate
aDepartment of Chemistry and Biochemistry, Georgia Southern University, Armstrong Campus, 11935 Abercorn Street, Savannah GA 31419, USA, and bChemistry, Department of Physical Sciences, St. Joseph's College, 155 West Roe Blvd, Patchogue, NY 11772, USA
*Correspondence e-mail: nshank@georgiasouthern.edu
The title thiazole orange derivative, bearing an alkene substituent, crystallized as a monohydrate of its iodide salt, namely, (Z)-1-(hex-5-en-1-yl)-4-{[3-methyl-2,3-dihydro-1,3-benzothiazol-2-ylidene]methyl}quinolin-1-ium iodide monohydrate, C24H25N2S+·I−·H2O. The packing features aromatic π-stacking and van der Waals interactions. The water molecule of crystallization interacts with the cation and anion via O—H⋯N and O—H⋯I hydrogen bonds, respectively.
Keywords: crystal structure; π–stacking; thiazole orange.
CCDC reference: 2195631
Structure description
Intercalating dyes are a standard means to detect duplex DNA or RNA in vitro and in vivo. The cyanine dye thiazole orange has been used extensively as a on/off fluorescent probe in a host of biological applications (Suss et al., 2021). The bis-intercalating dye based on thiazole orange has been shown to have an increased affinity towards duplexed oligomers and retains its fluorogenic characteristic (Rye et al., 1992). In an effort to enhance the binding affinity further, and essentially create a non-covalent interaction that is effectively permanent, we synthesized a thiazole orange dye bearing an alkene substituent that is capable of participating in polymerization reactions. Access to polymeric thiazole orange dye and other will afford extremely bright, highly organized, and versatile fluorescent probes that can be attached to molecules of interest and mitigate the equilibrium the dye would establish with endogenous duplexes.
Herein we report the 24H25N2S+·I−·H2O, which crystallizes in the triclinic P. In the cation (Fig. 1), the benzothiazole ring is titled by 3.32 (13)° with respect to the quinoline ring system: as a result the molecule is close to planar (excluding the hex-1-ene group) with an r.m.s. deviation of 0.048 Å for the non-hydrogen atoms; including the hex-1-ene group increases the r.m.s.d to 0.416 Å for the non-hydrogen atoms. The contains a water molecule of crystallization bound to the cation via a weak O1—H1A⋯N1 hydrogen bond [O⋯N = 3.014 (10) Å] and the anion via an O1—H1B⋯I1 link [O1⋯I1 = 3.546 (10) Å] (Table 1). There is also a weak C2—H2⋯S1 intramolecular interaction with C⋯S = 3.128 (7) that helps to maintain the coplanarity of the two ring systems.
of 4-hexenyl thiazole orange iodide monohydrate, C
|
In the extended structure (Fig. 2), aromatic π–π stacking is observed with Cg1⋯Cg2i = 3.559 (6) Å [symmetry code: (i) 2 − x, 2 − y, 1 − z] and Cg1⋯Cg3i = 3.492 (5) Å, where Cg1 is the centroid of the phenyl ring of the benzothiazole group containing atoms C18–C23, Cg2 is the centroid of the phenyl ring of the quinoline group containing atoms C4–C9, and Cg3 is the centroid of the pyridyl ring of the quinoline groups containing atoms N1/C1–C4/C9. These π–stacking interactions run along the [100] direction with neighboring layers held together with van der Waals interactions.
Synthesis and crystallization
All materials were purchased from Fisher Scientific or Sigma Aldrich and used as received. All flash .
was performed with 230 × 400 mesh silica gel. Pure samples were analyzed with a Joel 300 MHz NMR and HRMS of the title compound was acquired on a Shimadzu LCMS 9030 QTof operating in positive mode. The reaction scheme is shown in Fig. 36-Iodohex-1-ene (1)
In a conical reaction vial with a magnetic stir bar, 3.0 g of 6-chlorohex-1-ene (25.4 mmol, 1 eqv) was dissolved in 50 ml of acetone. To this solution was added 11.36 g (76.3 mmol, 3 equiv.) of sodium iodide. The solution was warmed slightly to assist with dissolving the sodium iodide and then covered and stirred for 48 h. An equal portion of hexane was added to the reaction and then the solids were filtered. The volatiles were stripped and the product was purified on silica with 100% hexanes as the 1H NMR [300 MHz, (CDCl3] δ = 5.77 (m, 1H, –CH=CH2), 4.98 (m, 2H, –CH=CH2), 2.19 (t, 2H, –CH2I), 2.07 (t, 2H, –CH2CH2CH2I), 1.77 (t, 2H, –CH2CH2CH2I), 1.52 (t, 2H, –CH2= CHCH2CH2) p.p.m.
Yield 3.31 g (62%) NMR:1-(Hex-5-en-1-yl)-4-methylquinolin-1-ium iodide (2)
To a conical reaction vial with a magnetic stir bar was added 0.22 g (1.58 mmol, 1 eqv) of 4-methylquinoline and 0.5 g (2.38 mmol, 1.5 equiv.) of 6-iodohex-1-ene. The reaction was stirred at 70°C for 18 h. The reaction was then purified on silica eluting with 2% methanol in DCM. Yield 0.54 g (96%) NMR: 1H NMR [300 MHz, (CDCl3)] δ = 10.17 (d, 1H, Ar.), 8.37 (m, 2H, Ar.), 8.20 (t, 1H, Ar.), 8.01 (m, 2H, Ar.), 5.71 (m, 1H, CH=CH2), 5.28 (t, 2H, –CH2N), 4.96 (m, 2H, –CH=CH2), 2.12 (m, 4H, –CH2CH2CH2), 1.62 (t, 2H, –CH2= CHCH2CH2) p.p.m.
2-Mercapto-3-methylbenzothiazol-3-ium iodide (3)
To a conical reaction flask was added 1 g (6.0 mmol, 1 eqv) of benzothiazole-2-thiol and 2.2 g (15.5 mmol, 2.6 eqv) of methyl iodide. The reaction was allowed to stir at 50°C for 24 h and then taken up in a minimal amount of methanol. The concentrated solution was then titrated into ether to form a precipitate that was collected by filtration. This provided the product as a white solid that needed no further purification. Yield 0.75 g (69%) NMR: 1H NMR [300 MHz, (CD3)2SO] δ = 8.43 (d, 1H, Ar.), 8.29 (d, 1H, Ar.), 7.90 (t, 2H, Ar.), 7.80 (t, 2H, Ar.), 4.20 (s, 3H, –CH3), 3.17 (t, 3H, –SCH3) p.p.m.
(Z)-1-(Hex-5-en-1-yl)-4-((3-methylbenzo[d]thiazol-2(3H)-ylidene)methyl)quinolin-1-ium iodide (4)
Into a conical reaction vial with a magnetic stir bar was added 106 mg (0.3 mmol, 1 eqv) of 2 that was dissolved in 2 ml of DMF. A total of 97 mg (0.3 mmol, 1 eqv) of 3 was added followed by the addition of 42 mg (0.3 mmol, 1 equiv.) of triethylamine. The solution immediately turned dark red and was allowed to stir for 48 h.
The solution was then added to ether, and the orange solid was collected.
The title compound was then purified using a gradient (2–5%) of methanol in DCM. Yield 45 mg (30%). NMR: 1H NMR [300 MHz, (CD3)2SO)] δ = 8.80 (d, 1H, Ar.), 8.63 (d, 1H, Ar.), 8.15 (d, 1H, Ar.), 8.06 (d, 1H, Ar.), 7.99 (t, 1H, Ar.), 7.77 (q, 2H, Ar.), 7.62 (t, 1H, Ar.), 7.40 (m, 2H, Ar.), 5.77 (m, 1H, –CH=CH2), 4.97 (t, 2H, –CH2N), 4.61 (t, 2H, –CH=CH2), 4.02 (s, 3H, –N—CH3) 2.08 (q, 2H, –CH2=CHCH2CH2), 1.85 (quin, 2H, –CH2CH2CH2), 1.45 (t, 2H, –CH2CH2CH2–) p.p.m.
Crystal formation: the title compound was taken up in methanol and then allowed to crystallize as dark-red prisms by slow evaporation of the solvent.
Refinement
Crystal data, data collection and structure .
details are summarized in Table 2Structural data
CCDC reference: 2195631
https://doi.org/10.1107/S2414314622007970/hb4408sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314622007970/hb4408Isup2.hkl
Data collection: CrysAlis PRO (Rigaku OD, 2019); cell
CrysAlis PRO (Rigaku OD, 2019); data reduction: CrysAlis PRO (Rigaku OD, 2019); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2018/1 (Sheldrick, 2015b); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).C24H25N2S+·I−·H2O | Z = 2 |
Mr = 518.43 | F(000) = 524 |
Triclinic, P1 | Dx = 1.505 Mg m−3 |
a = 8.4780 (11) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.5773 (17) Å | Cell parameters from 644 reflections |
c = 14.5191 (19) Å | θ = 2.1–21.1° |
α = 95.810 (12)° | µ = 1.51 mm−1 |
β = 105.762 (12)° | T = 170 K |
γ = 110.651 (14)° | Rect. prism, clear dark red |
V = 1144.1 (3) Å3 | 0.5 × 0.1 × 0.1 mm |
XtaLAB Mini (ROW) diffractometer | 4189 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Rigaku (Mo) X-ray Source | 2249 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.043 |
ω scans | θmax = 25.4°, θmin = 2.1° |
Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2019) | h = −10→10 |
Tmin = 0.332, Tmax = 1.000 | k = −12→11 |
6581 measured reflections | l = −17→16 |
Refinement on F2 | Primary atom site location: dual |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.060 | H-atom parameters constrained |
wR(F2) = 0.171 | w = 1/[σ2(Fo2) + (0.0622P)2 + 0.1317P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
4189 reflections | Δρmax = 0.66 e Å−3 |
266 parameters | Δρmin = −0.60 e Å−3 |
0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. All H atoms were placed in idealized locations (C—H = 0.93–0.97, O—H = 0.85 Å) and refined as riding atoms. |
x | y | z | Uiso*/Ueq | ||
I1 | 0.04034 (9) | 0.55965 (6) | 0.30846 (5) | 0.0920 (3) | |
S1 | 0.7927 (3) | 0.81364 (17) | 0.36094 (14) | 0.0577 (5) | |
N2 | 0.8314 (7) | 1.0670 (5) | 0.3757 (4) | 0.0495 (14) | |
N1 | 0.6019 (8) | 0.6852 (5) | 0.6841 (5) | 0.0579 (15) | |
C23 | 0.8637 (9) | 1.0327 (7) | 0.2901 (5) | 0.0511 (17) | |
C4 | 0.6594 (9) | 0.9170 (7) | 0.6522 (5) | 0.0498 (17) | |
C16 | 0.7461 (9) | 0.9748 (7) | 0.5082 (5) | 0.0537 (17) | |
H16 | 0.746994 | 1.060734 | 0.530348 | 0.064* | |
C3 | 0.7026 (9) | 0.8785 (6) | 0.5662 (5) | 0.0486 (17) | |
C17 | 0.7876 (8) | 0.9617 (6) | 0.4235 (5) | 0.0467 (16) | |
C9 | 0.6078 (9) | 0.8171 (7) | 0.7091 (5) | 0.0549 (18) | |
C2 | 0.6923 (9) | 0.7436 (7) | 0.5470 (5) | 0.0559 (18) | |
H2 | 0.716781 | 0.713601 | 0.492143 | 0.067* | |
C1 | 0.6479 (9) | 0.6548 (7) | 0.6053 (5) | 0.0590 (19) | |
H1 | 0.649126 | 0.567645 | 0.590268 | 0.071* | |
C18 | 0.8509 (9) | 0.8971 (7) | 0.2716 (5) | 0.0544 (18) | |
C22 | 0.9072 (10) | 1.1178 (8) | 0.2252 (6) | 0.066 (2) | |
H22 | 0.918042 | 1.209023 | 0.236988 | 0.080* | |
C10 | 0.5465 (10) | 0.5769 (7) | 0.7392 (6) | 0.067 (2) | |
H10A | 0.515625 | 0.487592 | 0.698316 | 0.080* | |
H10B | 0.439612 | 0.576184 | 0.751890 | 0.080* | |
C5 | 0.6653 (10) | 1.0472 (7) | 0.6860 (5) | 0.0609 (19) | |
H5 | 0.701850 | 1.115918 | 0.652057 | 0.073* | |
C11 | 0.6831 (11) | 0.5937 (7) | 0.8340 (6) | 0.066 (2) | |
H11A | 0.705991 | 0.678282 | 0.878000 | 0.079* | |
H11B | 0.793698 | 0.601946 | 0.822871 | 0.079* | |
C6 | 0.6208 (11) | 1.0797 (8) | 0.7658 (6) | 0.072 (2) | |
H6 | 0.624418 | 1.167804 | 0.783995 | 0.086* | |
C24 | 0.8400 (10) | 1.2008 (7) | 0.4111 (6) | 0.064 (2) | |
H24A | 0.927482 | 1.239531 | 0.475373 | 0.096* | |
H24B | 0.725376 | 1.193066 | 0.414159 | 0.096* | |
H24C | 0.872977 | 1.259910 | 0.367520 | 0.096* | |
C8 | 0.5616 (11) | 0.8527 (8) | 0.7912 (6) | 0.071 (2) | |
H8 | 0.524265 | 0.786504 | 0.826843 | 0.085* | |
O1 | 0.2316 (12) | 0.5102 (8) | 0.5443 (7) | 0.138 (3) | |
H1A | 0.291275 | 0.581291 | 0.590880 | 0.207* | |
H1B | 0.192515 | 0.534755 | 0.491739 | 0.207* | |
C19 | 0.8832 (11) | 0.8450 (8) | 0.1895 (6) | 0.073 (2) | |
H19 | 0.877847 | 0.755232 | 0.177902 | 0.087* | |
C12 | 0.6232 (11) | 0.4721 (8) | 0.8818 (6) | 0.071 (2) | |
H12A | 0.512182 | 0.464089 | 0.892323 | 0.085* | |
H12B | 0.599653 | 0.387829 | 0.837227 | 0.085* | |
C20 | 0.9230 (12) | 0.9296 (9) | 0.1268 (6) | 0.081 (2) | |
H20 | 0.943321 | 0.895594 | 0.071436 | 0.097* | |
C21 | 0.9340 (11) | 1.0618 (9) | 0.1423 (6) | 0.075 (2) | |
H21 | 0.959534 | 1.115594 | 0.097174 | 0.090* | |
C7 | 0.5706 (12) | 0.9825 (9) | 0.8191 (7) | 0.080 (3) | |
H7 | 0.542670 | 1.005128 | 0.874551 | 0.095* | |
C13 | 0.7538 (14) | 0.4843 (11) | 0.9753 (8) | 0.110 (3) | |
H13A | 0.770531 | 0.565495 | 1.020756 | 0.132* | |
H13B | 0.867061 | 0.500098 | 0.965176 | 0.132* | |
C14 | 0.7080 (18) | 0.3633 (12) | 1.0222 (8) | 0.113 (4) | |
H14 | 0.790099 | 0.376037 | 1.083381 | 0.136* | |
C15 | 0.585 (2) | 0.2529 (12) | 0.9957 (10) | 0.146 (6) | |
H15A | 0.496588 | 0.231168 | 0.935308 | 0.175* | |
H15B | 0.578332 | 0.188806 | 1.035348 | 0.175* |
U11 | U22 | U33 | U12 | U13 | U23 | |
I1 | 0.1378 (6) | 0.0665 (4) | 0.0968 (5) | 0.0488 (4) | 0.0612 (4) | 0.0317 (3) |
S1 | 0.0704 (12) | 0.0407 (9) | 0.0605 (12) | 0.0162 (9) | 0.0271 (10) | 0.0111 (9) |
N2 | 0.057 (4) | 0.041 (3) | 0.055 (4) | 0.019 (3) | 0.024 (3) | 0.018 (3) |
N1 | 0.058 (4) | 0.041 (3) | 0.072 (4) | 0.011 (3) | 0.029 (3) | 0.016 (3) |
C23 | 0.045 (4) | 0.048 (4) | 0.056 (5) | 0.010 (3) | 0.019 (4) | 0.014 (4) |
C4 | 0.053 (4) | 0.043 (4) | 0.061 (5) | 0.019 (3) | 0.028 (4) | 0.017 (3) |
C16 | 0.060 (5) | 0.046 (4) | 0.061 (5) | 0.021 (4) | 0.028 (4) | 0.017 (4) |
C3 | 0.048 (4) | 0.043 (4) | 0.055 (4) | 0.016 (3) | 0.018 (3) | 0.016 (3) |
C17 | 0.038 (4) | 0.042 (4) | 0.058 (5) | 0.010 (3) | 0.018 (3) | 0.014 (3) |
C9 | 0.050 (4) | 0.058 (4) | 0.064 (5) | 0.024 (4) | 0.025 (4) | 0.020 (4) |
C2 | 0.069 (5) | 0.048 (4) | 0.057 (5) | 0.019 (4) | 0.033 (4) | 0.018 (4) |
C1 | 0.069 (5) | 0.047 (4) | 0.060 (5) | 0.018 (4) | 0.027 (4) | 0.008 (4) |
C18 | 0.057 (5) | 0.047 (4) | 0.055 (5) | 0.013 (4) | 0.023 (4) | 0.013 (4) |
C22 | 0.066 (5) | 0.068 (5) | 0.075 (6) | 0.028 (4) | 0.033 (4) | 0.027 (5) |
C10 | 0.084 (6) | 0.050 (4) | 0.070 (5) | 0.016 (4) | 0.042 (5) | 0.024 (4) |
C5 | 0.078 (5) | 0.057 (4) | 0.062 (5) | 0.031 (4) | 0.035 (4) | 0.022 (4) |
C11 | 0.080 (5) | 0.059 (5) | 0.073 (6) | 0.030 (4) | 0.039 (5) | 0.024 (4) |
C6 | 0.101 (6) | 0.062 (5) | 0.083 (6) | 0.045 (5) | 0.059 (5) | 0.026 (4) |
C24 | 0.073 (5) | 0.054 (4) | 0.077 (6) | 0.027 (4) | 0.036 (4) | 0.027 (4) |
C8 | 0.088 (6) | 0.078 (5) | 0.082 (6) | 0.043 (5) | 0.060 (5) | 0.042 (5) |
O1 | 0.121 (7) | 0.111 (6) | 0.159 (8) | 0.044 (6) | 0.020 (6) | 0.009 (5) |
C19 | 0.091 (6) | 0.058 (5) | 0.066 (5) | 0.015 (5) | 0.043 (5) | 0.006 (4) |
C12 | 0.081 (6) | 0.063 (5) | 0.078 (6) | 0.028 (5) | 0.039 (5) | 0.025 (5) |
C20 | 0.093 (7) | 0.078 (6) | 0.068 (6) | 0.016 (5) | 0.048 (5) | 0.009 (5) |
C21 | 0.084 (6) | 0.072 (5) | 0.070 (6) | 0.017 (5) | 0.040 (5) | 0.028 (5) |
C7 | 0.106 (7) | 0.080 (6) | 0.096 (7) | 0.057 (6) | 0.069 (6) | 0.035 (5) |
C13 | 0.123 (9) | 0.109 (8) | 0.108 (8) | 0.051 (7) | 0.039 (7) | 0.052 (7) |
C14 | 0.159 (11) | 0.105 (8) | 0.094 (8) | 0.060 (9) | 0.051 (8) | 0.051 (7) |
C15 | 0.259 (18) | 0.093 (8) | 0.128 (11) | 0.065 (11) | 0.129 (12) | 0.048 (8) |
S1—C17 | 1.750 (7) | C11—H11A | 0.9700 |
S1—C18 | 1.726 (7) | C11—H11B | 0.9700 |
N2—C23 | 1.383 (8) | C11—C12 | 1.518 (9) |
N2—C17 | 1.366 (8) | C6—H6 | 0.9300 |
N2—C24 | 1.426 (8) | C6—C7 | 1.367 (10) |
N1—C9 | 1.385 (8) | C24—H24A | 0.9600 |
N1—C1 | 1.349 (9) | C24—H24B | 0.9600 |
N1—C10 | 1.478 (8) | C24—H24C | 0.9600 |
C23—C18 | 1.392 (9) | C8—H8 | 0.9300 |
C23—C22 | 1.400 (10) | C8—C7 | 1.361 (10) |
C4—C3 | 1.453 (9) | O1—H1A | 0.8500 |
C4—C9 | 1.427 (9) | O1—H1B | 0.8499 |
C4—C5 | 1.393 (9) | C19—H19 | 0.9300 |
C16—H16 | 0.9300 | C19—C20 | 1.365 (11) |
C16—C3 | 1.399 (9) | C12—H12A | 0.9700 |
C16—C17 | 1.375 (9) | C12—H12B | 0.9700 |
C3—C2 | 1.392 (9) | C12—C13 | 1.461 (11) |
C9—C8 | 1.408 (10) | C20—H20 | 0.9300 |
C2—H2 | 0.9300 | C20—C21 | 1.360 (11) |
C2—C1 | 1.351 (9) | C21—H21 | 0.9300 |
C1—H1 | 0.9300 | C7—H7 | 0.9300 |
C18—C19 | 1.397 (10) | C13—H13A | 0.9700 |
C22—H22 | 0.9300 | C13—H13B | 0.9700 |
C22—C21 | 1.396 (11) | C13—C14 | 1.491 (13) |
C10—H10A | 0.9700 | C14—H14 | 0.9300 |
C10—H10B | 0.9700 | C14—C15 | 1.196 (15) |
C10—C11 | 1.485 (10) | C15—H15A | 0.9300 |
C5—H5 | 0.9300 | C15—H15B | 0.9300 |
C5—C6 | 1.360 (10) | ||
C18—S1—C17 | 91.7 (3) | C10—C11—C12 | 111.7 (7) |
C23—N2—C24 | 123.1 (5) | H11A—C11—H11B | 107.9 |
C17—N2—C23 | 114.8 (5) | C12—C11—H11A | 109.3 |
C17—N2—C24 | 122.1 (6) | C12—C11—H11B | 109.3 |
C9—N1—C10 | 123.0 (6) | C5—C6—H6 | 120.1 |
C1—N1—C9 | 118.1 (6) | C5—C6—C7 | 119.9 (7) |
C1—N1—C10 | 118.9 (6) | C7—C6—H6 | 120.1 |
N2—C23—C18 | 112.7 (6) | N2—C24—H24A | 109.5 |
N2—C23—C22 | 127.5 (6) | N2—C24—H24B | 109.5 |
C18—C23—C22 | 119.8 (7) | N2—C24—H24C | 109.5 |
C9—C4—C3 | 119.4 (6) | H24A—C24—H24B | 109.5 |
C5—C4—C3 | 125.1 (6) | H24A—C24—H24C | 109.5 |
C5—C4—C9 | 115.5 (7) | H24B—C24—H24C | 109.5 |
C3—C16—H16 | 115.1 | C9—C8—H8 | 119.5 |
C17—C16—H16 | 115.1 | C7—C8—C9 | 121.1 (7) |
C17—C16—C3 | 129.9 (6) | C7—C8—H8 | 119.5 |
C16—C3—C4 | 119.3 (6) | H1A—O1—H1B | 109.5 |
C2—C3—C4 | 115.6 (6) | C18—C19—H19 | 121.0 |
C2—C3—C16 | 125.1 (7) | C20—C19—C18 | 118.1 (7) |
N2—C17—S1 | 110.0 (5) | C20—C19—H19 | 121.0 |
N2—C17—C16 | 123.3 (6) | C11—C12—H12A | 108.9 |
C16—C17—S1 | 126.8 (5) | C11—C12—H12B | 108.9 |
N1—C9—C4 | 120.7 (7) | H12A—C12—H12B | 107.7 |
N1—C9—C8 | 119.7 (6) | C13—C12—C11 | 113.6 (7) |
C8—C9—C4 | 119.6 (6) | C13—C12—H12A | 108.9 |
C3—C2—H2 | 118.8 | C13—C12—H12B | 108.9 |
C1—C2—C3 | 122.4 (7) | C19—C20—H20 | 118.8 |
C1—C2—H2 | 118.8 | C21—C20—C19 | 122.4 (8) |
N1—C1—C2 | 123.8 (7) | C21—C20—H20 | 118.8 |
N1—C1—H1 | 118.1 | C22—C21—H21 | 119.6 |
C2—C1—H1 | 118.1 | C20—C21—C22 | 120.7 (8) |
C23—C18—S1 | 110.8 (5) | C20—C21—H21 | 119.6 |
C23—C18—C19 | 120.8 (7) | C6—C7—H7 | 120.0 |
C19—C18—S1 | 128.3 (5) | C8—C7—C6 | 120.0 (8) |
C23—C22—H22 | 120.9 | C8—C7—H7 | 120.0 |
C21—C22—C23 | 118.2 (7) | C12—C13—H13A | 108.3 |
C21—C22—H22 | 120.9 | C12—C13—H13B | 108.3 |
N1—C10—H10A | 108.6 | C12—C13—C14 | 116.0 (9) |
N1—C10—H10B | 108.6 | H13A—C13—H13B | 107.4 |
N1—C10—C11 | 114.8 (6) | C14—C13—H13A | 108.3 |
H10A—C10—H10B | 107.5 | C14—C13—H13B | 108.3 |
C11—C10—H10A | 108.6 | C13—C14—H14 | 114.1 |
C11—C10—H10B | 108.6 | C15—C14—C13 | 131.8 (13) |
C4—C5—H5 | 118.1 | C15—C14—H14 | 114.1 |
C6—C5—C4 | 123.9 (7) | C14—C15—H15A | 120.0 |
C6—C5—H5 | 118.1 | C14—C15—H15B | 120.0 |
C10—C11—H11A | 109.3 | H15A—C15—H15B | 120.0 |
C10—C11—H11B | 109.3 | ||
S1—C18—C19—C20 | 178.2 (6) | C9—C4—C3—C2 | −1.0 (10) |
N2—C23—C18—S1 | 1.5 (8) | C9—C4—C5—C6 | −1.9 (12) |
N2—C23—C18—C19 | −178.5 (6) | C9—C8—C7—C6 | 1.7 (14) |
N2—C23—C22—C21 | −179.8 (7) | C1—N1—C9—C4 | 0.6 (10) |
N1—C9—C8—C7 | 178.2 (7) | C1—N1—C9—C8 | −179.7 (6) |
N1—C10—C11—C12 | −174.8 (6) | C1—N1—C10—C11 | 104.1 (8) |
C23—N2—C17—S1 | 1.7 (7) | C18—S1—C17—N2 | −0.7 (5) |
C23—N2—C17—C16 | −178.1 (6) | C18—S1—C17—C16 | 179.2 (6) |
C23—C18—C19—C20 | −1.7 (12) | C18—C23—C22—C21 | 1.0 (11) |
C23—C22—C21—C20 | −1.9 (12) | C18—C19—C20—C21 | 0.8 (14) |
C4—C3—C2—C1 | −1.1 (11) | C22—C23—C18—S1 | −179.1 (5) |
C4—C9—C8—C7 | −2.1 (12) | C22—C23—C18—C19 | 0.8 (11) |
C4—C5—C6—C7 | 1.6 (13) | C10—N1—C9—C4 | −178.9 (6) |
C16—C3—C2—C1 | −179.3 (7) | C10—N1—C9—C8 | 0.8 (11) |
C3—C4—C9—N1 | 1.2 (10) | C10—N1—C1—C2 | 176.7 (7) |
C3—C4—C9—C8 | −178.5 (7) | C10—C11—C12—C13 | 180.0 (8) |
C3—C4—C5—C6 | 178.7 (7) | C5—C4—C3—C16 | −3.2 (11) |
C3—C16—C17—S1 | 1.7 (11) | C5—C4—C3—C2 | 178.4 (7) |
C3—C16—C17—N2 | −178.5 (7) | C5—C4—C9—N1 | −178.2 (6) |
C3—C2—C1—N1 | 3.1 (12) | C5—C4—C9—C8 | 2.1 (10) |
C17—S1—C18—C23 | −0.5 (6) | C5—C6—C7—C8 | −1.4 (14) |
C17—S1—C18—C19 | 179.6 (7) | C11—C12—C13—C14 | −175.8 (9) |
C17—N2—C23—C18 | −2.1 (8) | C24—N2—C23—C18 | 178.8 (6) |
C17—N2—C23—C22 | 178.6 (7) | C24—N2—C23—C22 | −0.5 (11) |
C17—C16—C3—C4 | −178.6 (7) | C24—N2—C17—S1 | −179.2 (5) |
C17—C16—C3—C2 | −0.3 (12) | C24—N2—C17—C16 | 1.0 (10) |
C9—N1—C1—C2 | −2.8 (11) | C19—C20—C21—C22 | 1.0 (14) |
C9—N1—C10—C11 | −76.4 (9) | C12—C13—C14—C15 | 3 (2) |
C9—C4—C3—C16 | 177.4 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···S1 | 0.93 | 2.40 | 3.128 (7) | 135 |
O1—H1A···N1 | 0.85 | 2.39 | 3.014 (10) | 131 |
O1—H1B···I1 | 0.85 | 2.71 | 3.546 (10) | 169 |
Acknowledgements
The authors thank Georgia Southern University and the Department of Chemistry and Biochemistry for financial support of the department X-ray facility, and Georgia Southern College of Science and Mathematics Office of Undergraduate Research for partial support, plus an NSF–MRI grant.
Funding information
Funding for this research was provided by: National Science Foundation, Directorate for Mathematical and Physical Sciences (grant No. 2018774 to Nathaniel Shank).
References
Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341. Web of Science CrossRef CAS IUCr Journals Google Scholar
Rigaku OD (2019). CrysAlis PRO. Rigaku Oxford Diffraction, Yarnton, England. Google Scholar
Rye, H. S., Yue, S., Wemmer, D. E., Quesada, M. A., Haugland, R. P., Mathies, R. A. & Glazer, A. N. (1992). Nucleic Acids Res. 20, 2803–2812. CrossRef PubMed CAS Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Suss, O., Motiei, L. & Margulies, D. (2021). Molecules, 26, 2828. CrossRef PubMed Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.