organic compounds
(E)-5-(4-Chlorobenzylidene)-1-phenyl-4,5,6,7-tetrahydro-1H-indazol-4-one: and Hirshfeld surface analysis
aDepartment of Physics, The Madura College, Madurai 625 011, India, bDepartment of Physics, University College of Engineering Nagercoil, Anna University, Nagercoil 629 004, Tamilnadu, India, cDepartment of Organic Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai 625 021, India, and dDepartment of Physics, Bhairahawa M. Campus, Tribhuvan University, Nepal
*Correspondence e-mail: shalikaa.bh@gmail.com
In the title compound, C20H15ClN2O, the non-aromatic six-membered ring adopts a distorted with methylene-C atom nearest to the five-membered ring being the flap atom. The dihedral angle between the phenyl and chlorobenzene rings is 74.5 (1)°. The heterocyclic ring forms dihedral angles of 37.9 (1) and 64.3 (1)° with the phenyl and chlorobenzene rings, respectively. In the crystal, weak C—H⋯O interactions feature predominantly within the three-dimensional architecture. The intermolecular interactions are further analysed with the calculation of the Hirshfeld surfaces highlighting the prominent role of C—H⋯O interactions, along with H⋯H (36.8%) and C⋯H/H⋯C (26.5%) contacts.
Keywords: crystal structure; indazol-4-one; Hirshfeld Surface.
CCDC reference: 2121290
Structure description
Many et al., 2003; Faisal et al., 2019). The crystal and molecular structure of one such indazole derivative, namely, (E)-5-(4-chlorobenzylidene)-1-phenyl-4,5,6,7-tetrahydro-1H- indazol-4-one, is reported herein.
are studied for their biological and pharmacological activities. For example, 1,2-diazole derivatives are known to possess anti-depressant, anti-viral, anti-inflammatory and anti-cancer activities (PopatThe non-aromatic six-membered ring adopts a distorted . The heterocyclic ring forms dihedral angles of 37.9 (1) and 64.3 (1)° with the phenyl and chlorobenzene rings, respectively. The dihedral angle between the pendant rings is 74.5 (1)°. The molecular structure features a weak intramolecular interaction through C14—H14⋯O1 (Table 1).
with the methylene-C10 atom being the flap atom, Fig. 1The molecular packing features two ring motifs, viz., R22(10) and R22(16) (Bernstein et al., 1995), each around an inversion centre, through two C—H⋯O interactions, i.e. C7—H7⋯O1ii and C5—H5⋯O1i, respectively, Fig. 2; for symmetry codes, refer to Table 1. The centrosymmetric dimers thus formed are connected through two C—H⋯X interactions, viz., C17—H17⋯Oiii and C2—H2⋯Cliv, leading to chain C(8) and C(15) motifs, respectively. The first named interaction serves to connect the molecules along the along [001] and the latter along [101], Fig. 3. Clearly, the carbonyl-O1 atom plays a pivotal role in the supramolecular assembly.
The intermolecular interactions in the crystal state can be visualized through the calculation of the Hirshfeld surfaces and associated two-dimensional fingerprint plots. These were generated by Crystal Explorer (Wolff et al., 2012). The Hirshfeld surface is colour-mapped with the normalized contact distance, dnorm, i.e. from red (distances shorter than the sum of the van der Waals radii) through white to blue (distances longer than the sum of the van der Waals radii). The different types of intermolecular interactions can be identified by colour-coding distances from the surface to the nearest atom exterior (de) or interior (di) plots to the surface. The three-dimensional Hirshfeld surfaces and selected two-dimensional fingerprint plots (with percentage contributions) are given in Fig. 4.
The presence of spikes due to O⋯H/H⋯O interactions (8.6%) correspond to C—H⋯O intermolecular interactions, which feature predominantly within the crystalline assembly. The contribution of C⋯H/H⋯C contacts (26.5%), leading to a pair of well-defined wings, is also noteworthy. The H⋯H interactions contribute 36.8% with widely scattered points of high density, which is consistent with the large number of hydrogen atoms at the surface of the molecule. The Cl⋯H/H⋯Cl contacts also make a notable contribution to the total Hirshfeld surfaces, comprising about 12.9%. The large number of H⋯H, Cl⋯H/H⋯Cl, O⋯H/H⋯O interactions suggest that van der Waals interactions play a significant role in the packing in the crystal.
Synthesis and crystallization
A mixture of 1-phenyl-1,5,6,7-tetrahydro-4H-indazol-4-one, (1 mmol) and 4-chlorobenzaldehyde (1 mmol) was dissolved in ethanol followed by the addition of NaOH. The resulting mixture was stirred at room temperature for 1 h to afford (E)-5-(4-chlorobenzylidene)-1-phenyl-1,5,6,7-tetrahydro-4H-indazol-4-ones as the precipitate. This was filtered off and recrystallized from ethanol to afford colourless crystals; yield: 95%, m.p. 183–184°C.
Refinement
Crystal data, data collection and structure .
details are summarized in Table 2
|
Structural data
CCDC reference: 2121290
https://doi.org/10.1107/S2414314621011950/tk4071sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314621011950/tk4071Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2414314621011950/tk4071Isup3.cml
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2018 (Sheldrick, 2015b); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012), Mercury (Macrae et al., 2020) and PLATON (Spek, 2020); software used to prepare material for publication: SHELXL97 (Sheldrick, 2015b).C20H15ClN2O | F(000) = 1392 |
Mr = 334.79 | Dx = 1.324 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 30.4808 (16) Å | Cell parameters from 2246 reflections |
b = 8.6604 (5) Å | θ = 2.9–23.5° |
c = 14.0457 (7) Å | µ = 0.24 mm−1 |
β = 115.071 (2)° | T = 293 K |
V = 3358.4 (3) Å3 | Block, colourless |
Z = 8 | 0.22 × 0.20 × 0.16 mm |
Bruker SMART APEXII CCD diffractometer | Rint = 0.056 |
Radiation source: fine-focus sealed tube | θmax = 25.5°, θmin = 3.2° |
ω and φ scans | h = −36→36 |
42189 measured reflections | k = −10→10 |
2949 independent reflections | l = −16→16 |
2353 reflections with I > 2σ(I) |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.051 | w = 1/[σ2(Fo2) + (0.0578P)2 + 3.7997P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.146 | (Δ/σ)max < 0.001 |
S = 1.12 | Δρmax = 0.39 e Å−3 |
2949 reflections | Δρmin = −0.44 e Å−3 |
218 parameters | Extinction correction: SHELXL2018 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.0169 (15) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. The hydrogen atoms were included in their geometrically calculated positions and refined isotropically with C—H = 0.93 or 0.97 Å and Uiso(H) = 1.2Ueq(C). |
x | y | z | Uiso*/Ueq | ||
C1 | 0.30506 (10) | 0.5737 (4) | 0.3310 (2) | 0.0788 (9) | |
H1 | 0.3008 | 0.6269 | 0.2702 | 0.095* | |
C2 | 0.26559 (11) | 0.5226 (5) | 0.3465 (3) | 0.0966 (12) | |
H2 | 0.2345 | 0.5414 | 0.2953 | 0.116* | |
C3 | 0.27141 (10) | 0.4449 (4) | 0.4359 (3) | 0.0853 (9) | |
H3 | 0.2445 | 0.4113 | 0.4450 | 0.102* | |
C4 | 0.31708 (10) | 0.4167 (3) | 0.5118 (2) | 0.0706 (7) | |
H4 | 0.3212 | 0.3647 | 0.5729 | 0.085* | |
C5 | 0.35712 (9) | 0.4656 (3) | 0.49759 (19) | 0.0580 (6) | |
H5 | 0.3881 | 0.4453 | 0.5487 | 0.070* | |
C6 | 0.35095 (8) | 0.5440 (3) | 0.40771 (17) | 0.0531 (6) | |
C7 | 0.43290 (9) | 0.6267 (3) | 0.30115 (16) | 0.0558 (6) | |
H7 | 0.4422 | 0.6301 | 0.2461 | 0.067* | |
C8 | 0.46319 (8) | 0.6698 (3) | 0.40535 (15) | 0.0466 (5) | |
C9 | 0.43539 (8) | 0.6472 (2) | 0.46043 (15) | 0.0447 (5) | |
C10 | 0.45229 (8) | 0.6841 (3) | 0.57428 (15) | 0.0490 (5) | |
H10A | 0.4664 | 0.5931 | 0.6165 | 0.059* | |
H10B | 0.4252 | 0.7178 | 0.5882 | 0.059* | |
C11 | 0.49020 (8) | 0.8128 (3) | 0.60228 (17) | 0.0536 (6) | |
H11A | 0.4739 | 0.9090 | 0.5720 | 0.064* | |
H11B | 0.5055 | 0.8254 | 0.6780 | 0.064* | |
C12 | 0.52910 (8) | 0.7832 (3) | 0.56429 (16) | 0.0460 (5) | |
C13 | 0.51238 (8) | 0.7266 (3) | 0.45363 (16) | 0.0480 (5) | |
C14 | 0.57663 (8) | 0.8010 (3) | 0.62150 (17) | 0.0503 (5) | |
H14 | 0.5962 | 0.7770 | 0.5876 | 0.060* | |
C15 | 0.60225 (8) | 0.8534 (3) | 0.73111 (17) | 0.0483 (5) | |
C16 | 0.58651 (9) | 0.9775 (3) | 0.77156 (18) | 0.0545 (6) | |
H16 | 0.5589 | 1.0315 | 0.7278 | 0.065* | |
C17 | 0.61102 (9) | 1.0221 (3) | 0.87534 (19) | 0.0599 (6) | |
H17 | 0.6002 | 1.1056 | 0.9011 | 0.072* | |
C18 | 0.65138 (9) | 0.9423 (3) | 0.93968 (19) | 0.0617 (7) | |
C19 | 0.66861 (9) | 0.8207 (3) | 0.9027 (2) | 0.0666 (7) | |
H19 | 0.6962 | 0.7676 | 0.9473 | 0.080* | |
C20 | 0.64429 (8) | 0.7783 (3) | 0.7983 (2) | 0.0595 (6) | |
H20 | 0.6563 | 0.6978 | 0.7725 | 0.071* | |
N1 | 0.39190 (7) | 0.5928 (2) | 0.39106 (13) | 0.0502 (5) | |
N2 | 0.39011 (8) | 0.5812 (2) | 0.29111 (14) | 0.0588 (5) | |
O1 | 0.53879 (6) | 0.7264 (2) | 0.40725 (12) | 0.0669 (5) | |
Cl1 | 0.68147 (4) | 0.99499 (12) | 1.07100 (6) | 0.1050 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0585 (16) | 0.120 (3) | 0.0481 (14) | 0.0063 (16) | 0.0129 (12) | −0.0020 (15) |
C2 | 0.0489 (15) | 0.156 (3) | 0.0687 (19) | −0.0017 (18) | 0.0097 (14) | −0.014 (2) |
C3 | 0.0570 (16) | 0.119 (3) | 0.082 (2) | −0.0160 (17) | 0.0322 (15) | −0.0208 (19) |
C4 | 0.0634 (16) | 0.0813 (19) | 0.0700 (17) | −0.0088 (14) | 0.0310 (14) | −0.0017 (14) |
C5 | 0.0515 (13) | 0.0658 (15) | 0.0528 (13) | −0.0032 (11) | 0.0185 (11) | −0.0002 (11) |
C6 | 0.0450 (12) | 0.0638 (14) | 0.0472 (12) | −0.0030 (10) | 0.0163 (10) | −0.0126 (11) |
C7 | 0.0719 (16) | 0.0620 (14) | 0.0346 (11) | −0.0053 (12) | 0.0235 (11) | −0.0014 (10) |
C8 | 0.0588 (12) | 0.0498 (12) | 0.0326 (10) | −0.0014 (10) | 0.0205 (9) | −0.0006 (9) |
C9 | 0.0512 (12) | 0.0463 (12) | 0.0342 (10) | 0.0015 (9) | 0.0159 (9) | −0.0006 (8) |
C10 | 0.0503 (12) | 0.0643 (14) | 0.0354 (10) | −0.0041 (10) | 0.0208 (9) | −0.0065 (10) |
C11 | 0.0565 (13) | 0.0652 (14) | 0.0418 (11) | −0.0061 (11) | 0.0234 (10) | −0.0131 (10) |
C12 | 0.0542 (12) | 0.0478 (12) | 0.0389 (11) | −0.0037 (10) | 0.0225 (9) | −0.0017 (9) |
C13 | 0.0612 (13) | 0.0496 (12) | 0.0380 (10) | −0.0013 (10) | 0.0256 (10) | 0.0011 (9) |
C14 | 0.0583 (13) | 0.0526 (13) | 0.0458 (12) | −0.0079 (10) | 0.0278 (10) | −0.0038 (10) |
C15 | 0.0494 (12) | 0.0484 (12) | 0.0476 (12) | −0.0080 (10) | 0.0211 (10) | −0.0035 (9) |
C16 | 0.0570 (13) | 0.0497 (13) | 0.0512 (13) | −0.0031 (10) | 0.0175 (11) | −0.0019 (10) |
C17 | 0.0673 (15) | 0.0550 (14) | 0.0565 (14) | −0.0070 (12) | 0.0253 (12) | −0.0130 (11) |
C18 | 0.0647 (15) | 0.0654 (16) | 0.0472 (13) | −0.0158 (12) | 0.0162 (12) | −0.0066 (11) |
C19 | 0.0528 (13) | 0.0643 (16) | 0.0637 (16) | −0.0029 (12) | 0.0064 (12) | −0.0019 (13) |
C20 | 0.0498 (13) | 0.0578 (14) | 0.0671 (15) | −0.0046 (11) | 0.0211 (12) | −0.0139 (12) |
N1 | 0.0526 (10) | 0.0598 (12) | 0.0343 (9) | −0.0020 (9) | 0.0146 (8) | −0.0049 (8) |
N2 | 0.0689 (13) | 0.0686 (13) | 0.0332 (9) | −0.0044 (10) | 0.0163 (9) | −0.0038 (9) |
O1 | 0.0719 (11) | 0.0929 (14) | 0.0488 (9) | −0.0152 (10) | 0.0382 (9) | −0.0104 (9) |
Cl1 | 0.1194 (8) | 0.1189 (8) | 0.0501 (4) | −0.0154 (6) | 0.0101 (4) | −0.0184 (4) |
C1—C6 | 1.380 (3) | C10—H10B | 0.9700 |
C1—C2 | 1.383 (4) | C11—C12 | 1.514 (3) |
C1—H1 | 0.9300 | C11—H11A | 0.9700 |
C2—C3 | 1.367 (5) | C11—H11B | 0.9700 |
C2—H2 | 0.9300 | C12—C14 | 1.335 (3) |
C3—C4 | 1.370 (4) | C12—C13 | 1.498 (3) |
C3—H3 | 0.9300 | C13—O1 | 1.232 (2) |
C4—C5 | 1.384 (3) | C14—C15 | 1.472 (3) |
C4—H4 | 0.9300 | C14—H14 | 0.9300 |
C5—C6 | 1.375 (3) | C15—C20 | 1.389 (3) |
C5—H5 | 0.9300 | C15—C16 | 1.393 (3) |
C6—N1 | 1.428 (3) | C16—C17 | 1.382 (3) |
C7—N2 | 1.312 (3) | C16—H16 | 0.9300 |
C7—C8 | 1.410 (3) | C17—C18 | 1.366 (4) |
C7—H7 | 0.9300 | C17—H17 | 0.9300 |
C8—C9 | 1.382 (3) | C18—C19 | 1.373 (4) |
C8—C13 | 1.445 (3) | C18—Cl1 | 1.737 (2) |
C9—N1 | 1.354 (3) | C19—C20 | 1.384 (3) |
C9—C10 | 1.492 (3) | C19—H19 | 0.9300 |
C10—C11 | 1.532 (3) | C20—H20 | 0.9300 |
C10—H10A | 0.9700 | N1—N2 | 1.385 (2) |
C6—C1—C2 | 118.6 (3) | C10—C11—H11A | 108.8 |
C6—C1—H1 | 120.7 | C12—C11—H11B | 108.8 |
C2—C1—H1 | 120.7 | C10—C11—H11B | 108.8 |
C3—C2—C1 | 121.3 (3) | H11A—C11—H11B | 107.7 |
C3—C2—H2 | 119.4 | C14—C12—C13 | 117.88 (19) |
C1—C2—H2 | 119.4 | C14—C12—C11 | 125.50 (19) |
C2—C3—C4 | 119.7 (3) | C13—C12—C11 | 116.62 (18) |
C2—C3—H3 | 120.1 | O1—C13—C8 | 122.14 (19) |
C4—C3—H3 | 120.1 | O1—C13—C12 | 122.5 (2) |
C3—C4—C5 | 120.0 (3) | C8—C13—C12 | 115.31 (18) |
C3—C4—H4 | 120.0 | C12—C14—C15 | 128.6 (2) |
C5—C4—H4 | 120.0 | C12—C14—H14 | 115.7 |
C6—C5—C4 | 119.8 (2) | C15—C14—H14 | 115.7 |
C6—C5—H5 | 120.1 | C20—C15—C16 | 117.5 (2) |
C4—C5—H5 | 120.1 | C20—C15—C14 | 119.6 (2) |
C5—C6—C1 | 120.5 (2) | C16—C15—C14 | 122.9 (2) |
C5—C6—N1 | 120.5 (2) | C17—C16—C15 | 121.3 (2) |
C1—C6—N1 | 119.0 (2) | C17—C16—H16 | 119.3 |
N2—C7—C8 | 112.04 (19) | C15—C16—H16 | 119.3 |
N2—C7—H7 | 124.0 | C18—C17—C16 | 119.3 (2) |
C8—C7—H7 | 124.0 | C18—C17—H17 | 120.3 |
C9—C8—C7 | 104.84 (19) | C16—C17—H17 | 120.3 |
C9—C8—C13 | 123.08 (18) | C17—C18—C19 | 121.3 (2) |
C7—C8—C13 | 132.08 (19) | C17—C18—Cl1 | 119.5 (2) |
N1—C9—C8 | 106.97 (18) | C19—C18—Cl1 | 119.2 (2) |
N1—C9—C10 | 129.34 (19) | C18—C19—C20 | 119.0 (2) |
C8—C9—C10 | 123.66 (19) | C18—C19—H19 | 120.5 |
C9—C10—C11 | 108.14 (18) | C20—C19—H19 | 120.5 |
C9—C10—H10A | 110.1 | C19—C20—C15 | 121.4 (2) |
C11—C10—H10A | 110.1 | C19—C20—H20 | 119.3 |
C9—C10—H10B | 110.1 | C15—C20—H20 | 119.3 |
C11—C10—H10B | 110.1 | C9—N1—N2 | 111.14 (18) |
H10A—C10—H10B | 108.4 | C9—N1—C6 | 129.95 (17) |
C12—C11—C10 | 113.84 (19) | N2—N1—C6 | 118.87 (17) |
C12—C11—H11A | 108.8 | C7—N2—N1 | 105.00 (17) |
C6—C1—C2—C3 | 0.3 (5) | C11—C12—C13—C8 | −15.1 (3) |
C1—C2—C3—C4 | 0.0 (6) | C13—C12—C14—C15 | −179.6 (2) |
C2—C3—C4—C5 | −0.6 (5) | C11—C12—C14—C15 | −0.8 (4) |
C3—C4—C5—C6 | 0.8 (4) | C12—C14—C15—C20 | 137.4 (3) |
C4—C5—C6—C1 | −0.4 (4) | C12—C14—C15—C16 | −43.2 (4) |
C4—C5—C6—N1 | −178.9 (2) | C20—C15—C16—C17 | −1.6 (3) |
C2—C1—C6—C5 | −0.1 (4) | C14—C15—C16—C17 | 179.0 (2) |
C2—C1—C6—N1 | 178.3 (3) | C15—C16—C17—C18 | −0.3 (4) |
N2—C7—C8—C9 | 0.0 (3) | C16—C17—C18—C19 | 1.3 (4) |
N2—C7—C8—C13 | −179.9 (2) | C16—C17—C18—Cl1 | −178.43 (19) |
C7—C8—C9—N1 | 0.5 (2) | C17—C18—C19—C20 | −0.3 (4) |
C13—C8—C9—N1 | −179.6 (2) | Cl1—C18—C19—C20 | 179.4 (2) |
C7—C8—C9—C10 | −177.5 (2) | C18—C19—C20—C15 | −1.7 (4) |
C13—C8—C9—C10 | 2.3 (3) | C16—C15—C20—C19 | 2.7 (4) |
N1—C9—C10—C11 | −150.9 (2) | C14—C15—C20—C19 | −177.9 (2) |
C8—C9—C10—C11 | 26.7 (3) | C8—C9—N1—N2 | −0.9 (2) |
C9—C10—C11—C12 | −48.7 (3) | C10—C9—N1—N2 | 177.0 (2) |
C10—C11—C12—C14 | −133.4 (2) | C8—C9—N1—C6 | 176.8 (2) |
C10—C11—C12—C13 | 45.5 (3) | C10—C9—N1—C6 | −5.3 (4) |
C9—C8—C13—O1 | 169.9 (2) | C5—C6—N1—C9 | −37.2 (4) |
C7—C8—C13—O1 | −10.2 (4) | C1—C6—N1—C9 | 144.3 (3) |
C9—C8—C13—C12 | −9.1 (3) | C5—C6—N1—N2 | 140.4 (2) |
C7—C8—C13—C12 | 170.7 (2) | C1—C6—N1—N2 | −38.1 (3) |
C14—C12—C13—O1 | −15.3 (3) | C8—C7—N2—N1 | −0.5 (3) |
C11—C12—C13—O1 | 165.8 (2) | C9—N1—N2—C7 | 0.9 (3) |
C14—C12—C13—C8 | 163.8 (2) | C6—N1—N2—C7 | −177.1 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C14—H14···O1 | 0.93 | 2.43 | 2.804 (3) | 104 |
C5—H5···O1i | 0.93 | 2.53 | 3.320 (3) | 143 |
C7—H7···O1ii | 0.93 | 2.59 | 3.493 (3) | 163 |
C17—H17···O1iii | 0.93 | 2.40 | 3.260 (3) | 154 |
C2—H2···Cl1iv | 0.93 | 2.90 | 3.633 (3) | 137 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, y, −z+1/2; (iii) x, −y+2, z+1/2; (iv) x−1/2, y−1/2, z−1. |
Acknowledgements
JS thanks the management of Madura College for their constant support and encouragement. The authors' contributions are as follows. Conceptualization, CSM; methodology, CSM, SA; investigation, CSM, RRK; synthesis, ; X-ray analysis, ; validation, SA; writing (original draft), CSM; writing (review and editing of the manuscript), SRB; visualization, JS; resources, RRK, SRR; supervision, JS; project administration, SRB.
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