metal-organic compounds
trans-Diaquabis(pyridin-2-yl thiophen-2-yl ketone-κ2N,O)nickel(II) bis(tetrafluoridoborate)
aCentral Connecticut State University, Department of Chemistry and Biochemistry, 1615 Stanley St., New Britain, CT 06050, USA, and bThe University of Edinburgh, School of Chemistry, Joseph Black Building David Brewster Road, Edinburgh, EH9 3FJ, United Kingdom
*Correspondence e-mail: [email protected]
The complex title salt, [Ni(C10H7NOS)2(H2O)2](BF4)2, has monoclinic symmetry (space group P21/c) with the central NiII atom located at an inversion center. The coordination environment around the NiII atom is pseudo-octahedral with bonding to pyridyl N [2.0342 (6) Å] and carbonyl O [2.0402 (5) Å] atoms from two chelating 2-thienyl 2-pyridyl ketone ligands. The remaining bonds are to water molecules [2.0989 (7) Å], which are hydrogen-bonded to BF4− counter-ions. The was refined using nonspherical scattering factors.
Keywords: crystal structure; nickel; pyridyl ketone; hydrogen bonding.
CCDC reference: 2535729
Structure description
The ligand di-2-pyridyl ketone (dpk) displays an unusual hydration reaction in the presence of a metal ion allowing this ligand to have three distinct binding sites for metals – the two pyridyl nitrogen atoms and the diol (Efthymiou et al., 2010
; Stamatatos & Christou, 2009
). Derivatives of dpk, such as di-2-pyridyl ketone oxime (dpko), do not undergo this hydration reaction but can still form multiple binding sites with metals (Stoumpos et al., 2010
). The structurally related ligand 2-thienyl-2-pyridyl ketone (tpk) changes the donor of one ring from N to S, which affects the overall electronic and structural capabilities of the compound. To date, only one metal complex with the tpk ligand has been reported (Sommerer et al., 1998
). In this complex, only the pyridyl N – not the thienyl S – bonds with the metal ion, and the ketone remains unhydrated despite the presence of water.
The complex title salt (Fig. 1
) is structurally and crystallographically similar to the previously reported CuII analog (Sommerer et al., 1998
). The CuII complex salt was refined in the alternate of P21/n (versus P21/c) and can be considered as isoconfigurational (Lima de Faria et al., 1990
). Both the NiII atom of the current structure and the CuII atom from the previous report sit on an inversion center with pseudo-octahedral coordination. The tpk ligands coordinate through pyridyl N [2.0342 (6) Å] and carbonyl O [2.0402 (5) Å] atoms in the equatorial plane and through oxygen atoms from water molecules in the axial positions, leading to an [O4N2] coordination set. The Ni—O distances with the aqua ligands are significantly shorter than in the CuII complex [2.0989 (7) Å versus. 2.409 (3) Å], likely due to the Jahn–Teller distortion seen for octahedral CuII complexes (Procter et al., 1968
).
| Figure 1 The molecular structures of cation and anion in the complex title salt. Displacement ellipsoids are drawn at the 50% probability level; only atoms of the asymmetric unit are labeled and H atoms omitted for clarity. |
All other bond lengths and angles are consistent with the previously reported CuII complex (Sommerer et al., 1998
) and NiII complexes with similar ligands, such as di-2-pyridyl ketone (Sue-Lein et al., 1986
) or di-2-pyridyl ketone oxime (Stamou et al., 2025
).
The BF4− anion acts as a hydrogen-bonding acceptor with the coordinating water molecules as donors (Table 1
, Fig. 2
). These medium–strong O—H⋯F interactions link adjacent complexes and anions together to form a hydrogen-bonded sheet, which propagates in the bc plane.
| ||||||||||||||||||||||
| Figure 2 The crystal structure of the complex title salt in a view along the a axis. O—H⋯F hydrogen-bonding is shown by dashed lines. |
Synthesis and crystallization
Ni(BF4)2·6H2O and acetonitrile were used as received from Thermo-Fisher; 2-thienyl 2-pyridyl ketone was used as received from Rieke Metals. [Ni(C10H7NOS)2(H2O)2](BF4)2 was synthesized following a literature procedure (Sommerer et al., 1998
): excess Ni(BF4)2·6H2O (0.2294 g, 0.675 mmol) was combined with 2-thienyl 2-pyridyl ketone (0.1997 g, 1.10 mmol) in 35 ml of acetonitrile at room temperature affording a dark green solution, which was allowed to slowly evaporate until production and isolation of dark-green crystals suitable for X-ray diffraction (40 d).
Refinement
Crystal data, data collection and structure details are summarized in Table 2
. The crystal used for data collection was twinned. Non-merohedral twinning was handled with CrysAlis PRO (relation between the twin domains by matrix [ 0 0 / 0
0 / 0.9467 0 1]) and refined to a twin scale factor of 0.4990 (6). The was refined using nonspherical scattering factors, with all atoms refined anisotropically by using the ‘final' default settings of NoSpherA2 (Kleemiss et al., 2021
); ORCA 5.0 (Neese, 2022
) was used for quantum mechanical calculations. The latter programs are implemented in OLEX2 (Dolomanov et al., 2009
). The _olex2_refinement_description section of the CIF gives further details.
|
Structural data
CCDC reference: 2535729
contains datablock I. DOI: https://doi.org/10.1107/S2414314626002403/wm4244sup1.cif
Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314626002403/wm4244Isup2.hkl
| [Ni(C10H7NOS)2(H2O)2](BF4)2 | F(000) = 653.806 |
| Mr = 646.84 | Dx = 1.706 Mg m−3 |
| Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
| a = 7.07483 (19) Å | Cell parameters from 13596 reflections |
| b = 11.9935 (3) Å | θ = 2.2–37.0° |
| c = 15.2159 (4) Å | µ = 1.03 mm−1 |
| β = 102.760 (3)° | T = 100 K |
| V = 1259.22 (6) Å3 | Block, dark yellow |
| Z = 2 | 0.26 × 0.17 × 0.13 × 0.10 (radius) mm |
| XtaLAB Synergy, Single source at home/near, HyPix-Arc 100 diffractometer | 10509 independent reflections |
| Radiation source: fine-focus sealed X-ray tube, Enhance (Mo) X-ray Source | 9767 reflections with I ≥ 2u(I) |
| Graphite monochromator | Rint = 0.048 |
| Detector resolution: 10.0000 pixels mm-1 | θmax = 37.1°, θmin = 2.2° |
| ω scans | h = −11→11 |
| Absorption correction: multi-scan (CrysAlisPro; Rigaku OD, 2024) | k = −20→20 |
| Tmin = 0.857, Tmax = 0.858 | l = −25→25 |
| 10509 measured reflections |
| Refinement on F2 | 0 constraints |
| Least-squares matrix: full | Primary atom site location: structure-invariant direct methods |
| R[F2 > 2σ(F2)] = 0.030 | All H-atom parameters refined |
| wR(F2) = 0.086 | w = 1/[σ2(Fo2) + (0.0571P)2 + 0.1359P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.04 | (Δ/σ)max = −0.001 |
| 10509 reflections | Δρmax = 1.02 e Å−3 |
| 260 parameters | Δρmin = −0.46 e Å−3 |
| 111 restraints |
Refinement. NoSpherA2 refinement, some displacement ellipsoid restraints used. Non-merohedral twinning was handled with CrysAlisPro, twin law [-1 0 0 / 0 -1 0 / 0.9467 0 1] and refined twin scale factor 0.4990 (6). |
| x | y | z | Uiso*/Ueq | ||
| Ni1 | 0.0 | 0.5 | 0.0 | 0.01554 (3) | |
| S1 | 0.51294 (3) | 0.714938 (19) | 0.195111 (15) | 0.02452 (4) | |
| O1 | 0.20854 (7) | 0.60036 (5) | 0.07412 (4) | 0.01866 (9) | |
| O2 | −0.10841 (9) | 0.46202 (6) | 0.11422 (5) | 0.02351 (10) | |
| H2a | −0.122 (3) | 0.3961 (16) | 0.1328 (14) | 0.051 (4) | |
| H2b | −0.062 (3) | 0.5008 (14) | 0.1661 (14) | 0.038 (5) | |
| N2 | −0.14605 (7) | 0.64682 (5) | −0.00535 (5) | 0.01763 (10) | |
| C1 | −0.33236 (9) | 0.66168 (7) | −0.04418 (6) | 0.02221 (13) | |
| H1 | −0.407 (2) | 0.5867 (17) | −0.0779 (14) | 0.051 (5) | |
| C2 | −0.42673 (10) | 0.76294 (8) | −0.03927 (6) | 0.02484 (15) | |
| H2 | −0.5776 (18) | 0.7711 (16) | −0.0713 (13) | 0.040 (4) | |
| C3 | −0.32397 (11) | 0.84908 (7) | 0.01029 (7) | 0.02557 (15) | |
| H3 | −0.3928 (19) | 0.9261 (14) | 0.0201 (12) | 0.035 (4) | |
| C4 | −0.13057 (10) | 0.83255 (6) | 0.05346 (6) | 0.02240 (13) | |
| H4 | −0.047 (2) | 0.8930 (16) | 0.0989 (13) | 0.043 (4) | |
| C5 | −0.04442 (9) | 0.73122 (6) | 0.04249 (5) | 0.01673 (10) | |
| C6 | 0.16137 (8) | 0.69937 (6) | 0.08269 (5) | 0.01650 (10) | |
| C7 | 0.30595 (9) | 0.77502 (6) | 0.13156 (5) | 0.01887 (11) | |
| C8 | 0.31606 (11) | 0.89175 (7) | 0.13509 (6) | 0.02567 (14) | |
| H8 | 0.217 (2) | 0.9425 (13) | 0.1003 (12) | 0.059 (5) | |
| C9 | 0.49357 (14) | 0.92843 (9) | 0.18999 (8) | 0.03150 (18) | |
| H9 | 0.527 (3) | 1.0200 (18) | 0.206 (2) | 0.080 (9) | |
| C10 | 0.61176 (13) | 0.84113 (9) | 0.22691 (7) | 0.03060 (17) | |
| H10 | 0.754 (2) | 0.8531 (17) | 0.2664 (15) | 0.059 (6) | |
| F1 | 0.16379 (8) | 0.59372 (6) | 0.40965 (5) | 0.03488 (13) | |
| F2 | −0.13872 (8) | 0.63709 (9) | 0.33296 (5) | 0.04540 (19) | |
| F3 | 0.08886 (10) | 0.58187 (7) | 0.25713 (6) | 0.04152 (17) | |
| F4 | 0.11487 (11) | 0.75000 (6) | 0.32510 (6) | 0.03963 (15) | |
| B1 | 0.05459 (10) | 0.63984 (7) | 0.33141 (6) | 0.01851 (12) |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Ni1 | 0.01687 (5) | 0.01203 (5) | 0.01510 (6) | 0.00016 (3) | −0.00211 (4) | −0.00188 (4) |
| S1 | 0.02372 (7) | 0.02472 (9) | 0.02122 (9) | −0.00632 (5) | −0.00344 (6) | 0.00232 (7) |
| O1 | 0.01799 (17) | 0.0133 (2) | 0.0212 (2) | 0.00127 (13) | −0.00320 (15) | −0.00312 (18) |
| O2 | 0.0323 (2) | 0.0169 (3) | 0.0205 (3) | −0.00054 (18) | 0.0039 (2) | −0.0011 (2) |
| H2a | 0.081 (11) | 0.026 (4) | 0.040 (8) | −0.014 (3) | 0.002 (6) | 0.004 (2) |
| H2b | 0.074 (12) | 0.017 (7) | 0.018 (5) | −0.007 (5) | −0.001 (4) | 0.003 (3) |
| N2 | 0.01724 (19) | 0.0151 (2) | 0.0179 (3) | 0.00239 (15) | −0.00166 (16) | 0.0000 (2) |
| C1 | 0.0179 (2) | 0.0233 (3) | 0.0222 (3) | 0.00361 (19) | −0.0023 (2) | 0.0012 (3) |
| H1 | 0.036 (7) | 0.034 (6) | 0.071 (14) | 0.002 (3) | −0.013 (6) | −0.014 (4) |
| C2 | 0.0200 (2) | 0.0272 (4) | 0.0264 (4) | 0.0085 (2) | 0.0031 (2) | 0.0062 (3) |
| H2 | 0.023 (4) | 0.043 (8) | 0.050 (10) | 0.012 (2) | −0.003 (2) | 0.002 (5) |
| C3 | 0.0258 (3) | 0.0207 (3) | 0.0317 (4) | 0.0097 (2) | 0.0094 (3) | 0.0045 (3) |
| H3 | 0.031 (5) | 0.028 (5) | 0.044 (9) | 0.014 (2) | 0.003 (4) | −0.001 (3) |
| C4 | 0.0249 (3) | 0.0150 (3) | 0.0280 (4) | 0.0045 (2) | 0.0072 (2) | −0.0007 (3) |
| H4 | 0.043 (6) | 0.024 (7) | 0.056 (10) | 0.005 (3) | 0.001 (4) | −0.016 (4) |
| C5 | 0.0192 (2) | 0.0119 (2) | 0.0180 (3) | 0.00215 (16) | 0.00177 (18) | −0.0002 (2) |
| C6 | 0.0182 (2) | 0.0127 (3) | 0.0167 (3) | −0.00050 (16) | −0.00035 (18) | −0.0018 (2) |
| C7 | 0.0222 (2) | 0.0147 (3) | 0.0178 (3) | −0.00397 (17) | 0.0005 (2) | −0.0022 (2) |
| C8 | 0.0301 (3) | 0.0187 (3) | 0.0265 (4) | −0.0087 (2) | 0.0025 (3) | −0.0015 (3) |
| H8 | 0.059 (4) | 0.030 (4) | 0.074 (10) | −0.0002 (16) | −0.018 (3) | 0.003 (2) |
| C9 | 0.0372 (4) | 0.0239 (4) | 0.0328 (5) | −0.0133 (3) | 0.0064 (3) | −0.0097 (3) |
| H9 | 0.062 (8) | 0.027 (2) | 0.12 (2) | −0.0111 (14) | −0.039 (6) | −0.0161 (16) |
| C10 | 0.0308 (3) | 0.0348 (5) | 0.0225 (4) | −0.0144 (3) | −0.0020 (3) | −0.0054 (3) |
| H10 | 0.042 (3) | 0.035 (6) | 0.080 (13) | −0.0138 (15) | −0.025 (3) | −0.006 (3) |
| F1 | 0.0359 (2) | 0.0336 (3) | 0.0294 (3) | 0.0018 (2) | −0.0050 (2) | 0.0100 (3) |
| F2 | 0.0210 (2) | 0.0763 (6) | 0.0379 (4) | −0.0031 (2) | 0.0043 (2) | 0.0044 (4) |
| F3 | 0.0493 (3) | 0.0429 (4) | 0.0327 (3) | −0.0044 (3) | 0.0096 (3) | −0.0207 (3) |
| F4 | 0.0557 (3) | 0.0152 (3) | 0.0485 (5) | −0.0017 (2) | 0.0129 (3) | 0.0015 (3) |
| B1 | 0.0191 (2) | 0.0171 (3) | 0.0180 (3) | −0.00108 (19) | 0.0011 (2) | −0.0020 (3) |
| Ni1—O1i | 2.0402 (5) | C3—H3 | 1.070 (15) |
| Ni1—O1 | 2.0402 (5) | C3—C4 | 1.3950 (11) |
| Ni1—O2i | 2.0989 (7) | C4—H4 | 1.082 (17) |
| Ni1—O2 | 2.0989 (7) | C4—C5 | 1.3861 (10) |
| Ni1—N2i | 2.0342 (6) | C5—C6 | 1.4987 (9) |
| Ni1—N2 | 2.0342 (6) | C6—C7 | 1.4445 (9) |
| S1—C7 | 1.7243 (7) | C7—C8 | 1.4022 (11) |
| S1—C10 | 1.6924 (9) | C8—H8 | 0.989 (15) |
| O1—C6 | 1.2481 (8) | C8—C9 | 1.4160 (12) |
| O2—H2a | 0.852 (18) | C9—H9 | 1.14 (2) |
| O2—H2b | 0.91 (2) | C9—C10 | 1.3797 (16) |
| N2—C1 | 1.3321 (8) | C10—H10 | 1.060 (15) |
| N2—C5 | 1.3565 (9) | F1—B1 | 1.3833 (11) |
| C1—H1 | 1.109 (19) | F2—B1 | 1.3734 (9) |
| C1—C2 | 1.3958 (11) | F3—B1 | 1.3931 (11) |
| C2—H2 | 1.075 (13) | F4—B1 | 1.3982 (11) |
| C2—C3 | 1.3865 (14) | ||
| O1i—Ni1—O1 | 180.0 | C4—C3—C2 | 119.48 (7) |
| O2—Ni1—O1 | 91.27 (2) | C4—C3—H3 | 119.1 (9) |
| O2—Ni1—O1i | 88.73 (2) | H4—C4—C3 | 123.0 (9) |
| O2i—Ni1—O1 | 88.73 (2) | C5—C4—C3 | 118.66 (8) |
| O2i—Ni1—O1i | 91.27 (2) | C5—C4—H4 | 118.2 (9) |
| O2i—Ni1—O2 | 180.0 | C4—C5—N2 | 121.58 (6) |
| N2i—Ni1—O1i | 79.07 (2) | C6—C5—N2 | 112.38 (6) |
| N2i—Ni1—O1 | 100.93 (2) | C6—C5—C4 | 125.99 (7) |
| N2—Ni1—O1 | 79.07 (2) | C5—C6—O1 | 117.25 (6) |
| N2—Ni1—O1i | 100.93 (2) | C7—C6—O1 | 118.43 (6) |
| N2i—Ni1—O2i | 86.89 (3) | C7—C6—C5 | 124.31 (6) |
| N2—Ni1—O2 | 86.89 (3) | C6—C7—S1 | 116.32 (5) |
| N2i—Ni1—O2 | 93.11 (3) | C8—C7—S1 | 111.46 (5) |
| N2—Ni1—O2i | 93.11 (3) | C8—C7—C6 | 132.16 (7) |
| N2i—Ni1—N2 | 180.0 | H8—C8—C7 | 124.7 (9) |
| C10—S1—C7 | 91.87 (4) | C9—C8—C7 | 111.34 (8) |
| C6—O1—Ni1 | 116.21 (4) | C9—C8—H8 | 123.8 (9) |
| H2a—O2—Ni1i | 124.3 (14) | H9—C9—C8 | 122.7 (11) |
| H2b—O2—Ni1i | 118.7 (13) | C10—C9—C8 | 112.53 (8) |
| H2b—O2—H2a | 103.4 (17) | C10—C9—H9 | 124.6 (12) |
| C1—N2—Ni1 | 125.28 (5) | C9—C10—S1 | 112.79 (6) |
| C5—N2—Ni1 | 114.84 (4) | H10—C10—S1 | 124.3 (12) |
| C5—N2—C1 | 119.58 (6) | H10—C10—C9 | 122.8 (12) |
| H1—C1—N2 | 114.8 (9) | F2—B1—F1 | 110.16 (8) |
| C2—C1—N2 | 122.06 (8) | F3—B1—F1 | 109.54 (7) |
| C2—C1—H1 | 123.1 (9) | F3—B1—F2 | 110.76 (8) |
| H2—C2—C1 | 119.6 (10) | F4—B1—F1 | 108.43 (7) |
| C3—C2—C1 | 118.55 (6) | F4—B1—F2 | 110.11 (8) |
| C3—C2—H2 | 121.8 (10) | F4—B1—F3 | 107.79 (8) |
| H3—C3—C2 | 121.3 (8) | ||
| Ni1—O1—C6—C5 | 3.44 (6) | N2—C5—C6—C7 | 175.51 (6) |
| Ni1—O1—C6—C7 | −177.61 (5) | C1—N2—C5—C4 | 1.14 (9) |
| Ni1—N2—C1—C2 | 175.01 (7) | C1—N2—C5—C6 | 179.00 (7) |
| Ni1—N2—C5—C4 | −172.91 (6) | C1—C2—C3—C4 | 0.11 (10) |
| Ni1—N2—C5—C6 | 4.95 (6) | C2—C1—N2—C5 | 1.63 (10) |
| S1—C7—C6—O1 | −14.34 (7) | C2—C3—C4—C5 | 2.48 (10) |
| S1—C7—C6—C5 | 164.53 (5) | C3—C4—C5—C6 | 179.26 (7) |
| S1—C7—C8—C9 | −0.05 (7) | C4—C5—C6—C7 | −6.74 (10) |
| S1—C10—C9—C8 | 0.81 (8) | C5—C6—C7—C8 | −18.60 (10) |
| O1—C6—C5—N2 | −5.61 (8) | C6—C7—S1—C10 | 177.93 (7) |
| O1—C6—C5—C4 | 172.14 (7) | C6—C7—C8—C9 | −177.03 (10) |
| O1—C6—C7—C8 | 162.53 (7) | C7—S1—C10—C9 | −0.71 (6) |
| N2—C1—C2—C3 | −2.25 (10) | C7—C8—C9—C10 | −0.48 (9) |
| N2—C5—C4—C3 | −3.18 (9) | C8—C7—S1—C10 | 0.43 (7) |
| Symmetry code: (i) −x, −y+1, −z. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| O2—H2a···F4ii | 0.852 (18) | 1.862 (18) | 2.7091 (10) | 172 (2) |
| O2—H2b···F3 | 0.91 (2) | 1.83 (2) | 2.7206 (10) | 164 (2) |
| Symmetry code: (ii) −x, y−1/2, −z+1/2. |
Acknowledgements
B. Westcott thanks CSU-AAUP for research and travel funding and Dr G. Crundwell for helpful discussions.
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