

organic compounds
5-Acetyl-2-amino-4-(2-fluorophenyl)-6-methyl-4H-pyran-3-carbonitrile dichlomethane hemisolvate
aUniversity of KwaZulu-Natal, School of Chemistry and Physics, Private bag X54001, Durban, 4000, South Africa, and bMultimedia University of Kenya, PO Box 15653-00503, Nairobi, Kenya
*Correspondence e-mail: 224171425@stu.ukzn.ac.za
The title compound, 2C15H13FN2O2·CH2Cl2, crystallizes with two main molecules in the with a disordered dichloromethane solvent molecule. The dihedral angles between the fluoro phenyl ring and 4H-pyran ring are 74.36 (15) and 80.69 (15)° in the two molecules. In the crystal, N—H⋯N and N—H⋯O hydrogen bonds link the molecules into a two-dimensional supramolecular network propagating in the (100) plane.
Keywords: crystal structure; pyran; hydrogen bond.
CCDC reference: 2443758
![[Scheme 3D1]](hb4509scheme3D1.gif)
![[Scheme 1]](hb4509scheme1.gif)
Structure description
Amino-4H-pyran derivatives are useful building blocks in creating pharmacologically active heterocycles in multicomponent reactions, such as anti-tumor (Fouda, 2016), antibacterial (Kathrotiya & Patel, 2012
), antimycobacterial (Alvey et al., 2009
) antileishmanial (Narender & Gupta, 2004
) and antiproliferative agents (Mansouri et al., 2011
). Our previous study on aryl-based 2-amino carbonitriles identified different hydrogen-bonding patters in the crystal structures (Zamisa et al., 2022
). A structural analysis using the Cambridge Structural Database (CSD version 5.46, November 2024 update); Groom et al., 2016
) showed various types of hydrogen-bonding patterns driven by substituents on the 4H-pyran core. These were dominated by N—H⋯N and N—H⋯O interactions involving the amino and carbonyl/cyano groups. This analysis indicated that the binding affinity of these compounds towards calf thymus deoxyribonucleic acid may be associated with hydrogen bonds involving their amino functional groups. This finding is consistent with our exploration of potential anticancer agents (Zamisa et al., 2022
). The current study continues our investigation into the structures of 4H-pyran derivatives as potential anticancer agents and reports the synthesis and structure of the title compound.
There are two symmetrically independent C15H13FN2O2 molecules in the (Fig. 1). Each molecule comprises a cycloalkanone, 4H-pyran core with attached phenyl moiety, cyano, and amino groups. The dihedral angle between the fluorophenyl and 4H-pyran rings are 74.36 (15)° (C1 molecule) and 80.69 (15)° (C16 molecule) and are similar to those of related compounds in the literature (Zamisa et al., 2022
, 2023
).
![]() | Figure 1 The molecular structure of the title compound with displacement ellipsoids drawn at the 40% probability level. The disordered components, including the aromatic and methine hydrogen atoms, are omitted for clarity. |
In the crystal, the molecules are linked by N—H⋯N and N—H⋯O hydrogen bonds (Table 1, Fig. 2
) engendered by the amine One of these hydrogen atoms, H1B or H4B, interacts with the nitrogen atom N3 or N2 of a neighbouring molecule via an N—H⋯N link with the graph-set descriptor R22(12) (involving the amino and the cyano group) (Motif I). An N—H⋯O hydrogen bond graph with graph-set descriptor C22(10) with the carbonyl group oxygen atom O3 or O1 of a neighbouring molecule acting as acceptor to the amine (Motif II), Fig. 2
(Nyapola et al., 2024
; Zamisa et al., 2022
) is also observed. These two motifs combined create a supramolecular structure that propagates in the (100) plane of the crystal.
|
![]() | Figure 2 A projection of the crystal packing along the a-axis. Dashed lines denote N—H⋯N and N—H⋯O hydrogen bonds. Motifs 1 and II (see text) are depicted by blue and red dotted lines, respectively. |
Synthesis and crystallization
0.015 mmol of 1,3-cyclohexanedione were mixed with 0.015 mmol of malonotrile and 0.015 mmol of benzaldehyde in a microwave vessel. A catalytic amount of triethylamine was added in a tightly sealed 35 ml microwave reaction vessel, and the mixture was subjected to microwave radiation at 150°C for 10 minutes. An off-white solid precipitate was formed and collected by vacuum filtration. The reaction progress was monitored using
with a solvent ratio of 1:1 for ethyl acetate and hexane. The resulting precipitate was isolated and recrystallized from ethanol solution. Crystals of the title compound were obtained through slow isothermal evaporation from absolute dichloromethane solution.Refinement
Crystallographic data and structure . SIMU restraints and EADP constraints in SHELXL were used to model the disorder of the solvent molecule. The hydrogen atoms were positioned geometrically with N—H = 0.86 Å and C—H = 0.93–0.96 Å depending on and allowed to ride on their parent atoms with Uiso(H) = 1.2Ueq(C).
|
Structural data
CCDC reference: 2443758
https://doi.org/10.1107/S2414314625003372/hb4509sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314625003372/hb4509Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2414314625003372/hb4509Isup3.cml
2C15H13FN2O2·CH2Cl2 | F(000) = 1304 |
Mr = 629.47 | Dx = 1.327 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 10.8670 (4) Å | Cell parameters from 9748 reflections |
b = 15.2671 (6) Å | θ = 2.3–27.0° |
c = 19.1569 (8) Å | µ = 0.26 mm−1 |
β = 97.463 (2)° | T = 296 K |
V = 3151.4 (2) Å3 | Block, colourless |
Z = 4 | 0.31 × 0.22 × 0.16 mm |
Bruker SMART APEXII CCD diffractometer | 6190 independent reflections |
Radiation source: microfocus sealed X-ray tube, Incoatec Iµs | 4405 reflections with I > 2σ(I) |
Mirror optics monochromator | Rint = 0.063 |
Detector resolution: 7.9 pixels mm-1 | θmax = 26.0°, θmin = 1.7° |
ω and φ scans | h = −13→13 |
Absorption correction: multi-scan (SADABS; Krause et al., 2015) | k = −18→18 |
Tmin = 0.485, Tmax = 0.746 | l = −23→23 |
84575 measured reflections |
Refinement on F2 | Primary atom site location: dual |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.074 | H-atom parameters constrained |
wR(F2) = 0.239 | w = 1/[σ2(Fo2) + (0.1098P)2 + 1.8679P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max < 0.001 |
6190 reflections | Δρmax = 0.71 e Å−3 |
419 parameters | Δρmin = −0.60 e Å−3 |
59 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
F1 | 0.6616 (2) | 0.83522 (16) | 0.26782 (10) | 0.0953 (7) | |
O1 | 0.7001 (3) | 0.93283 (16) | 0.55386 (12) | 0.0889 (7) | |
O2 | 0.6515 (2) | 0.66060 (13) | 0.52455 (10) | 0.0754 (6) | |
N1 | 0.6603 (3) | 0.53973 (16) | 0.46177 (14) | 0.0874 (9) | |
H1A | 0.664961 | 0.509947 | 0.424097 | 0.105* | |
H1B | 0.655578 | 0.513218 | 0.500938 | 0.105* | |
N2 | 0.6820 (4) | 0.60700 (19) | 0.28440 (15) | 0.0938 (10) | |
C1 | 0.6117 (3) | 0.9631 (2) | 0.43838 (18) | 0.0780 (9) | |
H1C | 0.672777 | 0.970770 | 0.406908 | 0.117* | |
H1D | 0.592906 | 1.018817 | 0.457700 | 0.117* | |
H1E | 0.537620 | 0.938604 | 0.413090 | 0.117* | |
C2 | 0.6612 (3) | 0.90264 (18) | 0.49666 (15) | 0.0590 (7) | |
C3 | 0.6610 (2) | 0.80710 (17) | 0.48275 (13) | 0.0512 (6) | |
C4 | 0.6532 (3) | 0.74986 (18) | 0.53509 (14) | 0.0592 (7) | |
C5 | 0.6604 (3) | 0.62692 (18) | 0.45944 (14) | 0.0616 (7) | |
C6 | 0.6671 (3) | 0.67926 (16) | 0.40317 (13) | 0.0524 (6) | |
C7 | 0.6665 (2) | 0.77841 (15) | 0.40747 (13) | 0.0487 (6) | |
H7 | 0.591720 | 0.799862 | 0.378372 | 0.058* | |
C8 | 0.6404 (4) | 0.7660 (2) | 0.61059 (16) | 0.0832 (10) | |
H8A | 0.720099 | 0.760602 | 0.638425 | 0.125* | |
H8B | 0.584349 | 0.723771 | 0.626143 | 0.125* | |
H8C | 0.608424 | 0.823891 | 0.615798 | 0.125* | |
C9 | 0.6762 (3) | 0.63938 (18) | 0.33777 (15) | 0.0617 (7) | |
C10 | 0.7795 (2) | 0.81656 (16) | 0.37852 (13) | 0.0518 (6) | |
C11 | 0.7726 (3) | 0.84350 (19) | 0.30958 (16) | 0.0651 (7) | |
C12 | 0.8707 (4) | 0.8794 (2) | 0.2811 (2) | 0.0873 (11) | |
H12 | 0.861562 | 0.896505 | 0.234132 | 0.105* | |
C13 | 0.9811 (4) | 0.8896 (3) | 0.3224 (3) | 0.0961 (12) | |
H13 | 1.048277 | 0.913937 | 0.303786 | 0.115* | |
C14 | 0.9936 (3) | 0.8638 (3) | 0.3919 (2) | 0.0920 (11) | |
H14 | 1.068962 | 0.871236 | 0.420324 | 0.110* | |
C15 | 0.8935 (3) | 0.8266 (2) | 0.41938 (18) | 0.0727 (8) | |
H15 | 0.903207 | 0.808215 | 0.466051 | 0.087* | |
F2 | 0.3253 (2) | 0.65517 (16) | 0.13286 (11) | 0.1017 (7) | |
O4 | 0.30673 (19) | 0.84069 (12) | 0.38524 (9) | 0.0618 (5) | |
N3 | 0.3590 (3) | 0.89205 (18) | 0.14758 (15) | 0.0865 (9) | |
N4 | 0.3104 (3) | 0.96089 (15) | 0.32094 (13) | 0.0688 (7) | |
H4A | 0.316273 | 0.990322 | 0.283234 | 0.083* | |
H4B | 0.300445 | 0.987702 | 0.359285 | 0.083* | |
C16 | 0.3714 (4) | 0.5364 (2) | 0.3085 (2) | 0.0996 (13) | |
H16A | 0.297518 | 0.526520 | 0.276201 | 0.149* | |
H16B | 0.399092 | 0.482090 | 0.330364 | 0.149* | |
H16C | 0.435043 | 0.559851 | 0.283542 | 0.149* | |
C17 | 0.3444 (4) | 0.5994 (2) | 0.3631 (2) | 0.0860 (10) | |
C18 | 0.3294 (2) | 0.69418 (17) | 0.34666 (15) | 0.0562 (6) | |
C19 | 0.3188 (3) | 0.75174 (18) | 0.39809 (15) | 0.0584 (7) | |
C20 | 0.3169 (2) | 0.87347 (16) | 0.31995 (13) | 0.0516 (6) | |
C21 | 0.3321 (2) | 0.82051 (16) | 0.26544 (13) | 0.0497 (6) | |
C22 | 0.3258 (2) | 0.72140 (15) | 0.27028 (14) | 0.0516 (6) | |
H22 | 0.398628 | 0.696739 | 0.252122 | 0.062* | |
C23 | 0.3164 (4) | 0.7376 (3) | 0.47495 (17) | 0.0837 (10) | |
H23A | 0.238184 | 0.712484 | 0.482371 | 0.100* | |
H23B | 0.327234 | 0.792666 | 0.499163 | 0.100* | |
H23C | 0.382327 | 0.698536 | 0.492790 | 0.100* | |
C24 | 0.3476 (3) | 0.85970 (17) | 0.20039 (15) | 0.0597 (7) | |
C25 | 0.2090 (3) | 0.68716 (16) | 0.22507 (14) | 0.0550 (6) | |
C26 | 0.2138 (3) | 0.6560 (2) | 0.15778 (17) | 0.0715 (8) | |
C27 | 0.1119 (5) | 0.6249 (3) | 0.1150 (2) | 0.0957 (12) | |
H27 | 0.119165 | 0.604588 | 0.069968 | 0.115* | |
C28 | −0.0002 (4) | 0.6245 (3) | 0.1398 (3) | 0.1032 (14) | |
H28 | −0.069957 | 0.603421 | 0.111521 | 0.124* | |
C29 | −0.0109 (3) | 0.6550 (3) | 0.2067 (2) | 0.0913 (11) | |
H29 | −0.087412 | 0.654609 | 0.223550 | 0.110* | |
C30 | 0.0939 (3) | 0.6862 (2) | 0.24847 (18) | 0.0711 (8) | |
H30 | 0.086499 | 0.707098 | 0.293346 | 0.085* | |
O3A | 0.3692 (6) | 0.5749 (4) | 0.4238 (4) | 0.0913 (13) | 0.5 |
O3 | 0.2981 (7) | 0.5700 (4) | 0.4175 (4) | 0.107 (2) | 0.5 |
Cl2 | −0.0289 (13) | 0.5107 (10) | 0.3527 (10) | 0.183 (2) | 0.3333 |
Cl3 | −0.0044 (12) | 0.3416 (6) | 0.4020 (5) | 0.1845 (17) | 0.3333 |
C1A | 0.0493 (19) | 0.4488 (8) | 0.4202 (10) | 0.182 (2) | 0.3333 |
H1AA | 0.029605 | 0.468328 | 0.465648 | 0.219* | 0.3333 |
H1AB | 0.138398 | 0.452374 | 0.419922 | 0.219* | 0.3333 |
Cl3A | 0.0105 (8) | 0.3565 (4) | 0.4722 (4) | 0.1845 (17) | 0.3333 |
C1B | −0.045 (2) | 0.3910 (15) | 0.3879 (10) | 0.182 (2) | 0.3333 |
H1BA | 0.002048 | 0.358295 | 0.356847 | 0.219* | 0.3333 |
H1BB | −0.129373 | 0.369594 | 0.378881 | 0.219* | 0.3333 |
Cl2A | −0.0494 (14) | 0.4896 (11) | 0.3592 (10) | 0.183 (2) | 0.3333 |
Cl1 | 0.0398 (7) | 0.5174 (6) | 0.3831 (4) | 0.183 (2) | 0.3333 |
Cl4 | 0.0405 (12) | 0.3494 (5) | 0.4256 (5) | 0.1845 (17) | 0.3333 |
C1C | −0.0492 (18) | 0.4449 (9) | 0.4279 (13) | 0.182 (2) | 0.3333 |
H1CA | −0.054082 | 0.464065 | 0.475786 | 0.219* | 0.3333 |
H1CB | −0.132263 | 0.437309 | 0.403269 | 0.219* | 0.3333 |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.1047 (15) | 0.1224 (18) | 0.0571 (11) | −0.0045 (12) | 0.0040 (10) | 0.0216 (10) |
O1 | 0.123 (2) | 0.0682 (14) | 0.0725 (15) | 0.0101 (13) | 0.0004 (13) | −0.0274 (11) |
O2 | 0.1291 (19) | 0.0538 (11) | 0.0446 (10) | −0.0029 (11) | 0.0166 (11) | 0.0041 (8) |
N1 | 0.156 (3) | 0.0467 (14) | 0.0599 (15) | −0.0021 (15) | 0.0174 (16) | 0.0057 (11) |
N2 | 0.159 (3) | 0.0625 (16) | 0.0641 (17) | −0.0180 (18) | 0.0316 (18) | −0.0145 (14) |
C1 | 0.098 (2) | 0.0503 (16) | 0.086 (2) | 0.0146 (15) | 0.0117 (18) | −0.0010 (15) |
C2 | 0.0612 (15) | 0.0557 (15) | 0.0615 (17) | 0.0043 (12) | 0.0134 (13) | −0.0107 (13) |
C3 | 0.0566 (14) | 0.0501 (14) | 0.0474 (13) | 0.0034 (11) | 0.0088 (11) | −0.0045 (11) |
C4 | 0.0758 (18) | 0.0559 (15) | 0.0466 (14) | 0.0005 (13) | 0.0101 (12) | −0.0029 (11) |
C5 | 0.087 (2) | 0.0474 (14) | 0.0506 (15) | 0.0006 (13) | 0.0084 (13) | 0.0000 (11) |
C6 | 0.0701 (16) | 0.0441 (13) | 0.0430 (13) | −0.0012 (11) | 0.0075 (11) | −0.0013 (10) |
C7 | 0.0588 (14) | 0.0431 (13) | 0.0435 (13) | 0.0024 (10) | 0.0046 (10) | 0.0008 (10) |
C8 | 0.121 (3) | 0.083 (2) | 0.0489 (17) | −0.007 (2) | 0.0238 (17) | −0.0078 (15) |
C9 | 0.087 (2) | 0.0458 (14) | 0.0530 (16) | −0.0081 (13) | 0.0119 (13) | −0.0026 (12) |
C10 | 0.0630 (15) | 0.0409 (12) | 0.0526 (14) | 0.0041 (11) | 0.0120 (11) | −0.0025 (10) |
C11 | 0.0790 (19) | 0.0589 (16) | 0.0594 (17) | 0.0044 (14) | 0.0160 (14) | 0.0053 (13) |
C12 | 0.104 (3) | 0.081 (2) | 0.085 (2) | 0.010 (2) | 0.045 (2) | 0.0221 (19) |
C13 | 0.091 (3) | 0.082 (2) | 0.126 (4) | −0.004 (2) | 0.055 (3) | 0.006 (2) |
C14 | 0.0598 (19) | 0.107 (3) | 0.112 (3) | −0.0048 (18) | 0.0196 (19) | −0.012 (2) |
C15 | 0.0657 (18) | 0.084 (2) | 0.0692 (19) | 0.0023 (15) | 0.0119 (14) | −0.0028 (16) |
F2 | 0.1180 (17) | 0.1154 (18) | 0.0760 (13) | −0.0059 (13) | 0.0281 (12) | −0.0268 (12) |
O4 | 0.0872 (13) | 0.0507 (10) | 0.0483 (10) | 0.0004 (9) | 0.0120 (9) | 0.0018 (8) |
N3 | 0.138 (3) | 0.0617 (16) | 0.0629 (17) | −0.0072 (16) | 0.0236 (16) | 0.0076 (13) |
N4 | 0.109 (2) | 0.0436 (12) | 0.0536 (13) | −0.0007 (12) | 0.0116 (13) | −0.0040 (10) |
C16 | 0.113 (3) | 0.0431 (17) | 0.135 (3) | 0.0125 (17) | −0.012 (2) | 0.0041 (19) |
C17 | 0.110 (2) | 0.0546 (16) | 0.088 (2) | −0.0015 (16) | −0.0097 (19) | 0.0247 (15) |
C18 | 0.0607 (15) | 0.0455 (13) | 0.0601 (16) | −0.0011 (11) | −0.0005 (12) | 0.0102 (12) |
C19 | 0.0614 (15) | 0.0557 (15) | 0.0562 (16) | −0.0037 (12) | 0.0001 (12) | 0.0113 (12) |
C20 | 0.0607 (15) | 0.0443 (13) | 0.0492 (14) | −0.0031 (11) | 0.0049 (11) | 0.0016 (10) |
C21 | 0.0600 (14) | 0.0405 (12) | 0.0487 (13) | −0.0032 (10) | 0.0073 (11) | 0.0009 (10) |
C22 | 0.0581 (14) | 0.0394 (12) | 0.0570 (15) | 0.0029 (10) | 0.0063 (11) | 0.0013 (10) |
C23 | 0.105 (3) | 0.087 (2) | 0.0570 (18) | −0.0057 (19) | 0.0022 (17) | 0.0175 (16) |
C24 | 0.0834 (19) | 0.0422 (13) | 0.0542 (16) | −0.0032 (12) | 0.0119 (13) | −0.0025 (12) |
C25 | 0.0666 (16) | 0.0366 (12) | 0.0602 (16) | 0.0000 (11) | 0.0021 (12) | 0.0018 (11) |
C26 | 0.090 (2) | 0.0567 (17) | 0.0664 (19) | −0.0031 (15) | 0.0030 (16) | −0.0045 (14) |
C27 | 0.125 (3) | 0.083 (2) | 0.072 (2) | −0.013 (2) | −0.016 (2) | −0.0143 (18) |
C28 | 0.106 (3) | 0.087 (3) | 0.103 (3) | −0.025 (2) | −0.040 (3) | 0.007 (2) |
C29 | 0.067 (2) | 0.094 (3) | 0.108 (3) | −0.0108 (18) | −0.0091 (19) | 0.015 (2) |
C30 | 0.0692 (19) | 0.0662 (18) | 0.076 (2) | −0.0005 (15) | 0.0018 (15) | 0.0026 (15) |
O3A | 0.116 (3) | 0.060 (2) | 0.092 (2) | −0.001 (2) | −0.008 (2) | 0.0293 (18) |
O3 | 0.132 (5) | 0.073 (3) | 0.108 (4) | −0.012 (4) | −0.008 (4) | 0.044 (3) |
Cl2 | 0.183 (5) | 0.198 (5) | 0.172 (4) | 0.039 (4) | 0.029 (3) | 0.042 (3) |
Cl3 | 0.249 (6) | 0.148 (2) | 0.152 (5) | 0.028 (3) | 0.007 (4) | −0.019 (3) |
C1A | 0.181 (5) | 0.196 (5) | 0.171 (4) | 0.040 (4) | 0.026 (4) | 0.044 (4) |
Cl3A | 0.249 (6) | 0.148 (2) | 0.152 (5) | 0.028 (3) | 0.007 (4) | −0.019 (3) |
C1B | 0.181 (5) | 0.196 (5) | 0.171 (4) | 0.040 (4) | 0.026 (4) | 0.044 (4) |
Cl2A | 0.183 (5) | 0.198 (5) | 0.172 (4) | 0.039 (4) | 0.029 (3) | 0.042 (3) |
Cl1 | 0.183 (5) | 0.198 (5) | 0.172 (4) | 0.039 (4) | 0.029 (3) | 0.042 (3) |
Cl4 | 0.249 (6) | 0.148 (2) | 0.152 (5) | 0.028 (3) | 0.007 (4) | −0.019 (3) |
C1C | 0.181 (5) | 0.196 (5) | 0.171 (4) | 0.040 (4) | 0.026 (4) | 0.044 (4) |
F1—C11 | 1.364 (4) | C16—H16A | 0.9600 |
O1—C2 | 1.213 (3) | C16—H16B | 0.9600 |
O2—C4 | 1.377 (3) | C16—H16C | 0.9600 |
O2—C5 | 1.364 (3) | C16—C17 | 1.477 (6) |
N1—H1A | 0.8600 | C17—C18 | 1.486 (4) |
N1—H1B | 0.8600 | C17—O3A | 1.217 (7) |
N1—C5 | 1.332 (4) | C17—O3 | 1.293 (8) |
N2—C9 | 1.145 (4) | C18—C19 | 1.336 (4) |
C1—H1C | 0.9600 | C18—C22 | 1.517 (4) |
C1—H1D | 0.9600 | C19—C23 | 1.492 (4) |
C1—H1E | 0.9600 | C20—C21 | 1.348 (4) |
C1—C2 | 1.494 (4) | C21—C22 | 1.518 (3) |
C2—C3 | 1.483 (4) | C21—C24 | 1.412 (4) |
C3—C4 | 1.341 (4) | C22—H22 | 0.9800 |
C3—C7 | 1.516 (3) | C22—C25 | 1.533 (4) |
C4—C8 | 1.491 (4) | C23—H23A | 0.9600 |
C5—C6 | 1.351 (4) | C23—H23B | 0.9600 |
C6—C7 | 1.516 (3) | C23—H23C | 0.9600 |
C6—C9 | 1.408 (4) | C25—C26 | 1.381 (4) |
C7—H7 | 0.9800 | C25—C30 | 1.382 (4) |
C7—C10 | 1.527 (4) | C26—C27 | 1.374 (5) |
C8—H8A | 0.9600 | C27—H27 | 0.9300 |
C8—H8B | 0.9600 | C27—C28 | 1.363 (6) |
C8—H8C | 0.9600 | C28—H28 | 0.9300 |
C10—C11 | 1.376 (4) | C28—C29 | 1.383 (6) |
C10—C15 | 1.385 (4) | C29—H29 | 0.9300 |
C11—C12 | 1.372 (5) | C29—C30 | 1.389 (5) |
C12—H12 | 0.9300 | C30—H30 | 0.9300 |
C12—C13 | 1.358 (6) | Cl2—C1A | 1.734 (8) |
C13—H13 | 0.9300 | Cl3—C1A | 1.757 (8) |
C13—C14 | 1.377 (6) | C1A—H1AA | 0.9700 |
C14—H14 | 0.9300 | C1A—H1AB | 0.9700 |
C14—C15 | 1.390 (5) | Cl3A—C1B | 1.730 (16) |
C15—H15 | 0.9300 | C1B—H1BA | 0.9700 |
F2—C26 | 1.359 (4) | C1B—H1BB | 0.9700 |
O4—C19 | 1.383 (3) | C1B—Cl2A | 1.601 (18) |
O4—C20 | 1.365 (3) | Cl1—C1C | 1.765 (9) |
N3—C24 | 1.147 (4) | Cl4—C1C | 1.758 (9) |
N4—H4A | 0.8600 | C1C—H1CA | 0.9700 |
N4—H4B | 0.8600 | C1C—H1CB | 0.9700 |
N4—C20 | 1.337 (3) | ||
C5—O2—C4 | 120.4 (2) | C16—C17—C18 | 120.6 (3) |
H1A—N1—H1B | 120.0 | O3A—C17—C16 | 115.9 (5) |
C5—N1—H1A | 120.0 | O3A—C17—C18 | 120.4 (5) |
C5—N1—H1B | 120.0 | O3—C17—C16 | 118.6 (4) |
H1C—C1—H1D | 109.5 | O3—C17—C18 | 117.7 (5) |
H1C—C1—H1E | 109.5 | C17—C18—C22 | 117.4 (3) |
H1D—C1—H1E | 109.5 | C19—C18—C17 | 120.1 (3) |
C2—C1—H1C | 109.5 | C19—C18—C22 | 122.5 (2) |
C2—C1—H1D | 109.5 | O4—C19—C23 | 107.7 (3) |
C2—C1—H1E | 109.5 | C18—C19—O4 | 122.0 (2) |
O1—C2—C1 | 119.3 (3) | C18—C19—C23 | 130.3 (3) |
O1—C2—C3 | 121.9 (3) | N4—C20—O4 | 110.0 (2) |
C3—C2—C1 | 118.8 (2) | N4—C20—C21 | 128.5 (2) |
C2—C3—C7 | 117.1 (2) | C21—C20—O4 | 121.5 (2) |
C4—C3—C2 | 120.4 (2) | C20—C21—C22 | 122.7 (2) |
C4—C3—C7 | 122.5 (2) | C20—C21—C24 | 118.0 (2) |
O2—C4—C8 | 107.7 (2) | C24—C21—C22 | 119.2 (2) |
C3—C4—O2 | 122.4 (2) | C18—C22—C21 | 109.6 (2) |
C3—C4—C8 | 129.8 (3) | C18—C22—H22 | 108.4 |
N1—C5—O2 | 110.2 (2) | C18—C22—C25 | 111.6 (2) |
N1—C5—C6 | 128.2 (3) | C21—C22—H22 | 108.4 |
C6—C5—O2 | 121.6 (2) | C21—C22—C25 | 110.2 (2) |
C5—C6—C7 | 123.1 (2) | C25—C22—H22 | 108.4 |
C5—C6—C9 | 118.1 (2) | C19—C23—H23A | 109.5 |
C9—C6—C7 | 118.8 (2) | C19—C23—H23B | 109.5 |
C3—C7—C6 | 110.0 (2) | C19—C23—H23C | 109.5 |
C3—C7—H7 | 108.2 | H23A—C23—H23B | 109.5 |
C3—C7—C10 | 111.6 (2) | H23A—C23—H23C | 109.5 |
C6—C7—H7 | 108.2 | H23B—C23—H23C | 109.5 |
C6—C7—C10 | 110.6 (2) | N3—C24—C21 | 179.3 (4) |
C10—C7—H7 | 108.2 | C26—C25—C22 | 121.0 (3) |
C4—C8—H8A | 109.5 | C26—C25—C30 | 116.4 (3) |
C4—C8—H8B | 109.5 | C30—C25—C22 | 122.5 (3) |
C4—C8—H8C | 109.5 | F2—C26—C25 | 118.3 (3) |
H8A—C8—H8B | 109.5 | F2—C26—C27 | 118.3 (3) |
H8A—C8—H8C | 109.5 | C27—C26—C25 | 123.4 (4) |
H8B—C8—H8C | 109.5 | C26—C27—H27 | 120.6 |
N2—C9—C6 | 179.1 (4) | C28—C27—C26 | 118.8 (4) |
C11—C10—C7 | 121.1 (2) | C28—C27—H27 | 120.6 |
C11—C10—C15 | 116.2 (3) | C27—C28—H28 | 119.7 |
C15—C10—C7 | 122.6 (2) | C27—C28—C29 | 120.5 (4) |
F1—C11—C10 | 117.9 (3) | C29—C28—H28 | 119.7 |
F1—C11—C12 | 118.5 (3) | C28—C29—H29 | 120.4 |
C12—C11—C10 | 123.6 (3) | C28—C29—C30 | 119.2 (4) |
C11—C12—H12 | 120.4 | C30—C29—H29 | 120.4 |
C13—C12—C11 | 119.2 (4) | C25—C30—C29 | 121.7 (3) |
C13—C12—H12 | 120.4 | C25—C30—H30 | 119.1 |
C12—C13—H13 | 120.1 | C29—C30—H30 | 119.1 |
C12—C13—C14 | 119.9 (3) | Cl2—C1A—Cl3 | 104.0 (8) |
C14—C13—H13 | 120.1 | Cl2—C1A—H1AA | 111.0 |
C13—C14—H14 | 120.0 | Cl2—C1A—H1AB | 111.0 |
C13—C14—C15 | 120.0 (4) | Cl3—C1A—H1AA | 111.0 |
C15—C14—H14 | 120.0 | Cl3—C1A—H1AB | 111.0 |
C10—C15—C14 | 121.2 (3) | H1AA—C1A—H1AB | 109.0 |
C10—C15—H15 | 119.4 | Cl3A—C1B—H1BA | 105.6 |
C14—C15—H15 | 119.4 | Cl3A—C1B—H1BB | 105.6 |
C20—O4—C19 | 120.4 (2) | H1BA—C1B—H1BB | 106.1 |
H4A—N4—H4B | 120.0 | Cl2A—C1B—Cl3A | 126.8 (17) |
C20—N4—H4A | 120.0 | Cl2A—C1B—H1BA | 105.6 |
C20—N4—H4B | 120.0 | Cl2A—C1B—H1BB | 105.6 |
H16A—C16—H16B | 109.5 | Cl1—C1C—H1CA | 111.8 |
H16A—C16—H16C | 109.5 | Cl1—C1C—H1CB | 111.8 |
H16B—C16—H16C | 109.5 | Cl4—C1C—Cl1 | 99.6 (7) |
C17—C16—H16A | 109.5 | Cl4—C1C—H1CA | 111.8 |
C17—C16—H16B | 109.5 | Cl4—C1C—H1CB | 111.8 |
C17—C16—H16C | 109.5 | H1CA—C1C—H1CB | 109.6 |
F1—C11—C12—C13 | 178.8 (3) | O4—C20—C21—C22 | 6.5 (4) |
O1—C2—C3—C4 | 28.1 (4) | O4—C20—C21—C24 | −177.1 (2) |
O1—C2—C3—C7 | −153.5 (3) | N4—C20—C21—C22 | −174.2 (3) |
O2—C5—C6—C7 | 0.5 (5) | N4—C20—C21—C24 | 2.2 (4) |
O2—C5—C6—C9 | 179.9 (3) | C16—C17—C18—C19 | −172.5 (3) |
N1—C5—C6—C7 | −180.0 (3) | C16—C17—C18—C22 | 7.9 (5) |
N1—C5—C6—C9 | −0.5 (5) | C17—C18—C19—O4 | 179.0 (3) |
C1—C2—C3—C4 | −151.8 (3) | C17—C18—C19—C23 | −1.5 (5) |
C1—C2—C3—C7 | 26.7 (4) | C17—C18—C22—C21 | −170.5 (3) |
C2—C3—C4—O2 | 179.4 (3) | C17—C18—C22—C25 | 67.1 (3) |
C2—C3—C4—C8 | 1.9 (5) | C18—C22—C25—C26 | −140.8 (3) |
C2—C3—C7—C6 | 179.3 (2) | C18—C22—C25—C30 | 39.8 (3) |
C2—C3—C7—C10 | 56.2 (3) | C19—O4—C20—N4 | −175.8 (2) |
C3—C7—C10—C11 | −142.6 (2) | C19—O4—C20—C21 | 3.6 (4) |
C3—C7—C10—C15 | 37.0 (3) | C19—C18—C22—C21 | 10.0 (4) |
C4—O2—C5—N1 | 178.3 (3) | C19—C18—C22—C25 | −112.4 (3) |
C4—O2—C5—C6 | −2.1 (4) | C20—O4—C19—C18 | −6.2 (4) |
C4—C3—C7—C6 | −2.3 (4) | C20—O4—C19—C23 | 174.2 (3) |
C4—C3—C7—C10 | −125.4 (3) | C20—C21—C22—C18 | −12.5 (3) |
C5—O2—C4—C3 | 1.3 (4) | C20—C21—C22—C25 | 110.7 (3) |
C5—O2—C4—C8 | 179.3 (3) | C21—C22—C25—C26 | 97.1 (3) |
C5—C6—C7—C3 | 1.6 (4) | C21—C22—C25—C30 | −82.3 (3) |
C5—C6—C7—C10 | 125.3 (3) | C22—C18—C19—O4 | −1.6 (4) |
C6—C7—C10—C11 | 94.6 (3) | C22—C18—C19—C23 | 178.0 (3) |
C6—C7—C10—C15 | −85.8 (3) | C22—C25—C26—F2 | 1.0 (4) |
C7—C3—C4—O2 | 1.0 (4) | C22—C25—C26—C27 | −179.8 (3) |
C7—C3—C4—C8 | −176.4 (3) | C22—C25—C30—C29 | 180.0 (3) |
C7—C10—C11—F1 | 0.1 (4) | C24—C21—C22—C18 | 171.2 (2) |
C7—C10—C11—C12 | 179.0 (3) | C24—C21—C22—C25 | −65.6 (3) |
C7—C10—C15—C14 | −178.3 (3) | C25—C26—C27—C28 | 0.0 (6) |
C9—C6—C7—C3 | −177.9 (2) | C26—C25—C30—C29 | 0.5 (4) |
C9—C6—C7—C10 | −54.2 (3) | C26—C27—C28—C29 | 0.2 (6) |
C10—C11—C12—C13 | −0.2 (5) | C27—C28—C29—C30 | 0.0 (6) |
C11—C10—C15—C14 | 1.4 (5) | C28—C29—C30—C25 | −0.4 (5) |
C11—C12—C13—C14 | 0.2 (6) | C30—C25—C26—F2 | −179.5 (3) |
C12—C13—C14—C15 | 0.6 (6) | C30—C25—C26—C27 | −0.3 (5) |
C13—C14—C15—C10 | −1.4 (6) | O3A—C17—C18—C19 | −13.1 (6) |
C15—C10—C11—F1 | −179.5 (3) | O3A—C17—C18—C22 | 167.4 (5) |
C15—C10—C11—C12 | −0.6 (4) | O3—C17—C18—C19 | 27.6 (6) |
F2—C26—C27—C28 | 179.2 (3) | O3—C17—C18—C22 | −151.9 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···N3i | 0.86 | 2.26 | 3.066 (4) | 156 |
N1—H1B···O3ii | 0.86 | 2.03 | 2.844 (8) | 159 |
N1—H1B···O3Aii | 0.86 | 2.02 | 2.855 (7) | 165 |
N4—H4A···N2iii | 0.86 | 2.20 | 3.016 (4) | 157 |
N4—H4B···O1iv | 0.86 | 2.06 | 2.910 (3) | 170 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+1, −y+1, −z+1; (iii) −x+1, y+1/2, −z+1/2; (iv) −x+1, −y+2, −z+1. |
Acknowledgements
The authors acknowledge the University of KwaZulu-Natal for financial support.
References
Alvey, L., Prado, S., Saint-Joanis, B., Michel, S., Koch, M., Cole, S. T., Tillequin, F. & Janin, Y. L. (2009). Eur. J. Med. Chem. 44, 2497–2505. Web of Science CrossRef PubMed CAS Google Scholar
Bruker (2016). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339–341. Web of Science CrossRef CAS IUCr Journals Google Scholar
Fouda, A. M. (2016). Med. Chem. Res. 25, 1229–1238. CrossRef CAS Google Scholar
Groom, C. R., Bruno, I. J., Lightfoot, M. P. & Ward, S. C. (2016). Acta Cryst. B72, 171–179. Web of Science CrossRef IUCr Journals Google Scholar
Kathrotiya, H. G. & Patel, M. P. (2012). J. Med. Chem. 21, 3406–3416. CAS Google Scholar
Krause, L., Herbst-Irmer, R., Sheldrick, G. M. & Stalke, D. (2015). J. Appl. Cryst. 48, 3–10. Web of Science CSD CrossRef ICSD CAS IUCr Journals Google Scholar
Mansouri, K., Khodarahmi, R., Foroumadi, A., Mostafaie, A. & Mohammadi Motlagh, H. (2011). Med. Chem. Res. 20, 920–929. CrossRef CAS Google Scholar
Narender, T. & Gupta, S. (2004). BMCL. 15, 3913–3916. Google Scholar
Nyapola, C., Zamisa, S. J., Njogu, E. M. & Omondi, B. (2024). IUCrData, 9, x241049. Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Zamisa, S. J., Adeleke, A. A., Devnarain, N., Rhman, M. A., Owira, P. M. O. & Omondi, B. (2023). RSC Adv. 13, 21820–21837. Web of Science CSD CrossRef CAS PubMed Google Scholar
Zamisa, S. J., Ngubane, N. P., Adeleke, A. A., Jonnalagadda, S. B. & Omondi, B. (2022). Cryst. Growth Des. 22, 5814–5834. Web of Science CSD CrossRef CAS Google Scholar
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