organic compounds
(E)-3-(1,3-Diphenyl-1H-pyrazol-4-yl)-1-(thiazol-2-yl)prop-2-en-1-one
aDepartment of Applied Chemistry, Dongduk Women's University, Seoul 136-714, Republic of Korea
*Correspondence e-mail: dskoh@dongduk.ac.kr
In the title molecule, C21H15N3OS, the C5=C6 double bond in the central enone group adopts a trans configuration. The dihedral angle between planes of the thiazole and pyrazole rings is 6.6 (2)°. In the crystal, pairs of C—H⋯O hydrogen bonds generate inversion dimers and another pair of C—H⋯N hydrogen bonds link the dimers into chains propagating along a-axis direction.
Keywords: crystal structure; chalcone; heterocycles; C—H⋯O hydrogen bonds.
CCDC reference: 2308467
Structure description
α,β-unsaturated carbonyl (enone) group, and the two C6s represent phenyl groups attached to both ends of the enone group. which are of plants, have been shown to possess diverse biological activities including anticancer (Ouyang et al., 2021), anti-diabetic (Welday Kahssay et al., 2021), anti-microbial (Henry et al. 2020), and antiviral (Fu et al., 2020). According to recent studies, heterocycles exhibit better physiological activity than phenyl groups, so research is actively underway to replace the phenyl groups of chalcone with heterocycles (Elkanzi et al., 2022). As a continuation of our research program in this area (Jeong et al., 2020; Shin et al., 2020), the title chalcone containing a heterocycle was designed and synthesized.
commonly contain a C6—C3—C6 skeleton, of which C3 represents anThe molecular structure of the title compound is shown in Fig. 1. The trans configuration of the C5=C6 double bond in the central enone group is confirmed by the dihedral angle of C1—C5=C6—C7 of 179.25 (19)°. The title chalcone molecule has a thiazole ring and a pyrazole ring attached to both sides of the enone group. The dihedral angle between the thiazole ring (C2/N1/C3/C4/S1) and the pyrazole ring (C7/C8/N2/N3/C9) is 6.6 (2)°, indicating that the two rings are almost in the same plane. The pyrazole ring (C7/C8/N2/ N3/C9) has C10–C15 and C16–C21 phenyl groups attached to atoms C8 and N3, respectively. The C10–C15 and C16–C21 phenyl rings make dihedral angles with the pyrazole ring of 38.6 (1) and 25.0 (2)°, respectively, and the dihedral angle between the phenyl rings is 59.9 (3)°.
In the crystal, pairs of C—H⋯O hydrogen bonds generate inversion dimers with graph-set notation R22 (22) and another pair of C—H⋯N hydrogen bonds link the dimers into chains propagating along [100] (Table 1, Fig. 2).
Synthesis and crystallization
1,3-Diphenyl-1H-pyrazole-4-carbaldehyde (248 mg, 1 mmol) and 1-(thiazol-2-yl)ethanone (127 mg, 1 mmol) were dissolved in 20 ml of ethanol, then the temperature was set to to 276–277 K using an ice bath. To the cooled reaction mixture was added 1.0 ml of 40% aqueous KOH solution, and the reaction mixture was stirred at room temperature for 20 h.
This mixture was poured into iced water (50 ml) and was acidified (pH = 3) with 3 N HCl solution to give a precipitate. Filtration and washing with water afforded the crude solid of the title compound (232 mg, 65%). Recrystallization of the solid from ethanol solution gave crystals which were suitable for X-ray diffraction.
Refinement
Crystal data, data collection and structure .
details are summarized in Table 2Structural data
CCDC reference: 2308467
https://doi.org/10.1107/S2414314623009975/hb4458sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314623009975/hb4458Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2414314623009975/hb4458Isup3.cml
C21H15N3OS | F(000) = 744 |
Mr = 357.42 | Dx = 1.339 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 9.3312 (19) Å | Cell parameters from 5689 reflections |
b = 19.124 (4) Å | θ = 2.2–27.4° |
c = 9.977 (2) Å | µ = 0.20 mm−1 |
β = 95.453 (7)° | T = 223 K |
V = 1772.4 (6) Å3 | Block, colourless |
Z = 4 | 0.14 × 0.14 × 0.06 mm |
Bruker PHOTON III M14 diffractometer | Rint = 0.087 |
φ and ω scans | θmax = 28.3°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Krause et al., 2015) | h = −12→12 |
Tmin = 0.673, Tmax = 0.746 | k = −25→25 |
39547 measured reflections | l = −13→13 |
4419 independent reflections | 1 standard reflections every 1 reflections |
2775 reflections with I > 2σ(I) | intensity decay: 1% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.046 | H-atom parameters constrained |
wR(F2) = 0.127 | w = 1/[σ2(Fo2) + (0.0454P)2 + 0.6998P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max < 0.001 |
4419 reflections | Δρmax = 0.23 e Å−3 |
235 parameters | Δρmin = −0.26 e Å−3 |
0 restraints |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.2731 (2) | 0.79486 (10) | 0.16701 (19) | 0.0354 (5) | |
C2 | 0.1738 (2) | 0.75669 (10) | 0.06690 (19) | 0.0341 (4) | |
C3 | 0.0728 (2) | 0.67220 (12) | −0.0560 (2) | 0.0479 (6) | |
H3 | 0.0573 | 0.6258 | −0.0852 | 0.058* | |
C4 | −0.0034 (2) | 0.72640 (12) | −0.1141 (2) | 0.0507 (6) | |
H4 | −0.0760 | 0.7223 | −0.1858 | 0.061* | |
C5 | 0.3616 (2) | 0.75244 (11) | 0.26503 (19) | 0.0344 (4) | |
H5 | 0.3527 | 0.7035 | 0.2626 | 0.041* | |
C6 | 0.4552 (2) | 0.78221 (11) | 0.35826 (19) | 0.0351 (5) | |
H6 | 0.4625 | 0.8312 | 0.3574 | 0.042* | |
C7 | 0.5459 (2) | 0.74495 (10) | 0.45999 (19) | 0.0334 (4) | |
C8 | 0.6387 (2) | 0.77245 (10) | 0.56977 (18) | 0.0310 (4) | |
C9 | 0.5630 (2) | 0.67337 (11) | 0.4714 (2) | 0.0381 (5) | |
H9 | 0.5168 | 0.6396 | 0.4141 | 0.046* | |
C10 | 0.6660 (2) | 0.84560 (10) | 0.61250 (19) | 0.0319 (4) | |
C11 | 0.5555 (2) | 0.89512 (11) | 0.6078 (2) | 0.0377 (5) | |
H11 | 0.4613 | 0.8823 | 0.5754 | 0.045* | |
C12 | 0.5843 (2) | 0.96321 (11) | 0.6506 (2) | 0.0439 (5) | |
H12 | 0.5095 | 0.9963 | 0.6462 | 0.053* | |
C13 | 0.7219 (3) | 0.98278 (11) | 0.6996 (2) | 0.0469 (6) | |
H13 | 0.7408 | 1.0290 | 0.7281 | 0.056* | |
C14 | 0.8320 (2) | 0.93384 (12) | 0.7065 (2) | 0.0469 (5) | |
H14 | 0.9256 | 0.9466 | 0.7410 | 0.056* | |
C15 | 0.8040 (2) | 0.86618 (11) | 0.6625 (2) | 0.0390 (5) | |
H15 | 0.8795 | 0.8335 | 0.6665 | 0.047* | |
C16 | 0.7007 (2) | 0.59418 (10) | 0.6352 (2) | 0.0343 (4) | |
C17 | 0.6949 (2) | 0.53556 (11) | 0.5536 (2) | 0.0469 (6) | |
H17 | 0.6646 | 0.5396 | 0.4614 | 0.056* | |
C18 | 0.7338 (3) | 0.47096 (11) | 0.6082 (2) | 0.0508 (6) | |
H18 | 0.7297 | 0.4311 | 0.5528 | 0.061* | |
C19 | 0.7785 (2) | 0.46486 (11) | 0.7432 (2) | 0.0460 (5) | |
H19 | 0.8041 | 0.4209 | 0.7804 | 0.055* | |
C20 | 0.7852 (2) | 0.52363 (11) | 0.8236 (2) | 0.0430 (5) | |
H20 | 0.8169 | 0.5195 | 0.9155 | 0.052* | |
C21 | 0.7461 (2) | 0.58883 (10) | 0.7711 (2) | 0.0368 (5) | |
H21 | 0.7502 | 0.6286 | 0.8268 | 0.044* | |
N1 | 0.17339 (18) | 0.68897 (9) | 0.04742 (17) | 0.0402 (4) | |
N2 | 0.70582 (17) | 0.72116 (8) | 0.64143 (16) | 0.0331 (4) | |
N3 | 0.65750 (17) | 0.66057 (8) | 0.57930 (16) | 0.0346 (4) | |
O1 | 0.27593 (18) | 0.85888 (7) | 0.16369 (15) | 0.0524 (4) | |
S1 | 0.05109 (6) | 0.80275 (3) | −0.03886 (6) | 0.04908 (19) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0378 (11) | 0.0392 (12) | 0.0279 (10) | 0.0014 (9) | −0.0039 (9) | 0.0013 (8) |
C2 | 0.0328 (10) | 0.0415 (11) | 0.0265 (10) | −0.0015 (8) | −0.0045 (8) | 0.0049 (8) |
C3 | 0.0501 (13) | 0.0512 (13) | 0.0395 (13) | −0.0160 (11) | −0.0110 (10) | 0.0025 (10) |
C4 | 0.0437 (13) | 0.0643 (15) | 0.0406 (13) | −0.0163 (11) | −0.0145 (10) | 0.0100 (11) |
C5 | 0.0363 (10) | 0.0367 (11) | 0.0287 (10) | 0.0006 (8) | −0.0046 (8) | −0.0002 (8) |
C6 | 0.0366 (11) | 0.0390 (11) | 0.0287 (10) | 0.0005 (8) | −0.0028 (9) | 0.0028 (8) |
C7 | 0.0315 (10) | 0.0399 (11) | 0.0273 (10) | −0.0008 (8) | −0.0053 (8) | 0.0000 (8) |
C8 | 0.0284 (9) | 0.0375 (11) | 0.0265 (10) | 0.0008 (8) | −0.0006 (8) | 0.0003 (8) |
C9 | 0.0387 (11) | 0.0428 (12) | 0.0304 (11) | −0.0017 (9) | −0.0091 (9) | −0.0023 (9) |
C10 | 0.0329 (10) | 0.0375 (11) | 0.0243 (9) | −0.0009 (8) | −0.0031 (8) | 0.0022 (8) |
C11 | 0.0333 (11) | 0.0452 (12) | 0.0332 (11) | 0.0022 (9) | −0.0037 (9) | 0.0018 (9) |
C12 | 0.0494 (13) | 0.0415 (12) | 0.0405 (12) | 0.0103 (10) | 0.0022 (10) | 0.0027 (10) |
C13 | 0.0605 (15) | 0.0383 (12) | 0.0414 (13) | −0.0072 (10) | 0.0023 (11) | −0.0039 (10) |
C14 | 0.0422 (12) | 0.0509 (13) | 0.0455 (13) | −0.0087 (10) | −0.0063 (10) | −0.0054 (11) |
C15 | 0.0339 (11) | 0.0428 (12) | 0.0387 (12) | 0.0018 (9) | −0.0054 (9) | 0.0006 (9) |
C16 | 0.0319 (10) | 0.0370 (11) | 0.0329 (11) | 0.0023 (8) | −0.0027 (8) | 0.0000 (8) |
C17 | 0.0585 (14) | 0.0443 (13) | 0.0355 (12) | 0.0063 (11) | −0.0076 (11) | −0.0071 (10) |
C18 | 0.0562 (14) | 0.0394 (12) | 0.0549 (15) | 0.0064 (11) | −0.0044 (12) | −0.0097 (11) |
C19 | 0.0418 (12) | 0.0362 (12) | 0.0584 (15) | 0.0019 (9) | −0.0039 (11) | 0.0052 (10) |
C20 | 0.0422 (12) | 0.0475 (13) | 0.0375 (12) | −0.0017 (10) | −0.0058 (10) | 0.0091 (10) |
C21 | 0.0383 (11) | 0.0391 (11) | 0.0317 (11) | −0.0005 (9) | −0.0034 (9) | −0.0016 (9) |
N1 | 0.0417 (10) | 0.0415 (10) | 0.0350 (10) | −0.0047 (8) | −0.0079 (8) | 0.0026 (8) |
N2 | 0.0339 (9) | 0.0344 (9) | 0.0294 (9) | 0.0003 (7) | −0.0051 (7) | −0.0020 (7) |
N3 | 0.0372 (9) | 0.0365 (9) | 0.0284 (9) | 0.0006 (7) | −0.0064 (7) | −0.0031 (7) |
O1 | 0.0707 (11) | 0.0368 (9) | 0.0453 (9) | 0.0022 (7) | −0.0176 (8) | 0.0020 (7) |
S1 | 0.0457 (3) | 0.0520 (4) | 0.0454 (3) | 0.0003 (3) | −0.0178 (3) | 0.0110 (3) |
C1—O1 | 1.225 (2) | C11—C12 | 1.389 (3) |
C1—C5 | 1.464 (3) | C11—H11 | 0.9400 |
C1—C2 | 1.488 (3) | C12—C13 | 1.381 (3) |
C2—N1 | 1.310 (3) | C12—H12 | 0.9400 |
C2—S1 | 1.7235 (19) | C13—C14 | 1.387 (3) |
C3—C4 | 1.356 (3) | C13—H13 | 0.9400 |
C3—N1 | 1.366 (3) | C14—C15 | 1.383 (3) |
C3—H3 | 0.9400 | C14—H14 | 0.9400 |
C4—S1 | 1.698 (2) | C15—H15 | 0.9400 |
C4—H4 | 0.9400 | C16—C17 | 1.383 (3) |
C5—C6 | 1.341 (3) | C16—C21 | 1.386 (3) |
C5—H5 | 0.9400 | C16—N3 | 1.429 (2) |
C6—C7 | 1.446 (3) | C17—C18 | 1.384 (3) |
C6—H6 | 0.9400 | C17—H17 | 0.9400 |
C7—C9 | 1.382 (3) | C18—C19 | 1.377 (3) |
C7—C8 | 1.430 (2) | C18—H18 | 0.9400 |
C8—N2 | 1.334 (2) | C19—C20 | 1.379 (3) |
C8—C10 | 1.478 (3) | C19—H19 | 0.9400 |
C9—N3 | 1.348 (2) | C20—C21 | 1.388 (3) |
C9—H9 | 0.9400 | C20—H20 | 0.9400 |
C10—C15 | 1.393 (3) | C21—H21 | 0.9400 |
C10—C11 | 1.397 (3) | N2—N3 | 1.370 (2) |
O1—C1—C5 | 124.01 (18) | C11—C12—H12 | 119.7 |
O1—C1—C2 | 119.07 (17) | C12—C13—C14 | 119.6 (2) |
C5—C1—C2 | 116.91 (17) | C12—C13—H13 | 120.2 |
N1—C2—C1 | 125.29 (17) | C14—C13—H13 | 120.2 |
N1—C2—S1 | 114.98 (14) | C15—C14—C13 | 119.9 (2) |
C1—C2—S1 | 119.70 (15) | C15—C14—H14 | 120.0 |
C4—C3—N1 | 116.0 (2) | C13—C14—H14 | 120.0 |
C4—C3—H3 | 122.0 | C14—C15—C10 | 121.2 (2) |
N1—C3—H3 | 122.0 | C14—C15—H15 | 119.4 |
C3—C4—S1 | 110.21 (17) | C10—C15—H15 | 119.4 |
C3—C4—H4 | 124.9 | C17—C16—C21 | 120.48 (19) |
S1—C4—H4 | 124.9 | C17—C16—N3 | 119.78 (18) |
C6—C5—C1 | 121.15 (19) | C21—C16—N3 | 119.73 (17) |
C6—C5—H5 | 119.4 | C16—C17—C18 | 119.9 (2) |
C1—C5—H5 | 119.4 | C16—C17—H17 | 120.1 |
C5—C6—C7 | 125.23 (19) | C18—C17—H17 | 120.1 |
C5—C6—H6 | 117.4 | C19—C18—C17 | 120.2 (2) |
C7—C6—H6 | 117.4 | C19—C18—H18 | 119.9 |
C9—C7—C8 | 104.15 (16) | C17—C18—H18 | 119.9 |
C9—C7—C6 | 126.98 (18) | C18—C19—C20 | 119.5 (2) |
C8—C7—C6 | 128.87 (18) | C18—C19—H19 | 120.2 |
N2—C8—C7 | 111.06 (17) | C20—C19—H19 | 120.2 |
N2—C8—C10 | 118.81 (16) | C19—C20—C21 | 121.1 (2) |
C7—C8—C10 | 130.13 (17) | C19—C20—H20 | 119.4 |
N3—C9—C7 | 107.91 (17) | C21—C20—H20 | 119.4 |
N3—C9—H9 | 126.0 | C16—C21—C20 | 118.71 (19) |
C7—C9—H9 | 126.0 | C16—C21—H21 | 120.6 |
C15—C10—C11 | 118.33 (18) | C20—C21—H21 | 120.6 |
C15—C10—C8 | 119.95 (17) | C2—N1—C3 | 109.66 (18) |
C11—C10—C8 | 121.69 (17) | C8—N2—N3 | 105.17 (15) |
C12—C11—C10 | 120.31 (19) | C9—N3—N2 | 111.72 (16) |
C12—C11—H11 | 119.8 | C9—N3—C16 | 127.74 (16) |
C10—C11—H11 | 119.8 | N2—N3—C16 | 120.41 (15) |
C13—C12—C11 | 120.6 (2) | C4—S1—C2 | 89.14 (10) |
C13—C12—H12 | 119.7 | ||
O1—C1—C2—N1 | 170.4 (2) | C11—C10—C15—C14 | −0.1 (3) |
C5—C1—C2—N1 | −10.0 (3) | C8—C10—C15—C14 | −178.33 (19) |
O1—C1—C2—S1 | −7.2 (3) | C21—C16—C17—C18 | 0.4 (3) |
C5—C1—C2—S1 | 172.39 (15) | N3—C16—C17—C18 | −178.6 (2) |
N1—C3—C4—S1 | 0.3 (3) | C16—C17—C18—C19 | −0.1 (4) |
O1—C1—C5—C6 | −1.0 (3) | C17—C18—C19—C20 | −0.5 (4) |
C2—C1—C5—C6 | 179.36 (19) | C18—C19—C20—C21 | 0.8 (3) |
C1—C5—C6—C7 | 179.25 (19) | C17—C16—C21—C20 | −0.1 (3) |
C5—C6—C7—C9 | 6.8 (3) | N3—C16—C21—C20 | 178.92 (18) |
C5—C6—C7—C8 | −173.9 (2) | C19—C20—C21—C16 | −0.5 (3) |
C9—C7—C8—N2 | −0.1 (2) | C1—C2—N1—C3 | −177.27 (19) |
C6—C7—C8—N2 | −179.51 (19) | S1—C2—N1—C3 | 0.4 (2) |
C9—C7—C8—C10 | −179.0 (2) | C4—C3—N1—C2 | −0.5 (3) |
C6—C7—C8—C10 | 1.5 (3) | C7—C8—N2—N3 | 0.0 (2) |
C8—C7—C9—N3 | 0.2 (2) | C10—C8—N2—N3 | 179.03 (16) |
C6—C7—C9—N3 | 179.63 (19) | C7—C9—N3—N2 | −0.2 (2) |
N2—C8—C10—C15 | 38.3 (3) | C7—C9—N3—C16 | 175.49 (18) |
C7—C8—C10—C15 | −142.9 (2) | C8—N2—N3—C9 | 0.2 (2) |
N2—C8—C10—C11 | −139.93 (19) | C8—N2—N3—C16 | −175.91 (17) |
C7—C8—C10—C11 | 38.9 (3) | C17—C16—N3—C9 | 26.8 (3) |
C15—C10—C11—C12 | 0.8 (3) | C21—C16—N3—C9 | −152.2 (2) |
C8—C10—C11—C12 | 179.01 (18) | C17—C16—N3—N2 | −157.79 (19) |
C10—C11—C12—C13 | −0.6 (3) | C21—C16—N3—N2 | 23.2 (3) |
C11—C12—C13—C14 | −0.2 (3) | C3—C4—S1—C2 | −0.04 (19) |
C12—C13—C14—C15 | 0.9 (3) | N1—C2—S1—C4 | −0.24 (17) |
C13—C14—C15—C10 | −0.8 (3) | C1—C2—S1—C4 | 177.61 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
C18—H18···O1i | 0.94 | 2.56 | 3.451 (3) | 158 |
C4—H4···N2ii | 0.94 | 2.54 | 3.473 (3) | 172 |
C13—H13···O1iii | 0.94 | 2.41 | 3.321 (3) | 162 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) x−1, y, z−1; (iii) −x+1, −y+2, −z+1. |
Funding information
The author acknowledge financial support from the Basic Science Research Program (award No. NRF-2021R1F1A1052699).
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