organic compounds
15,15-Diphenyl-2,3,4,5,6,8,9,11,12-octahydroimidazo[2,1-h][1,4,12]trioxa[7]thia[9]azacyclotetradecin-14(15H)-one
aLaboratory of Medicinal Chemistry, Drug Sciences Research Center, Faculty of Medicine and Pharmacy, Mohammed V University in Rabat, Morocco, bLaboratory of Medicinal Chemistry, Faculty of Clinical Pharmacy, 21 September University, Yemen, and cDepartment of Chemistry, Tulane University, New Orleans, LA 70118, USA
*Correspondence e-mail: alsubaripharmaco@21umas.edu.ye, y.ramli@um5s.net.ma
This article is part of a collection of articles to commemorate the founding of the African Crystallographic Association and the 75th anniversary of the IUCr.
The title molecule, C23H26N2O4S, adopts a cup-shaped conformation. In the crystal, layers lying parallel to the ab plane are formed by C—H⋯O hydrogen bonds and C—H⋯π(ring) interactions. The layers stack along the c-axis direction through normal van der Waals interactions.
Keywords: crystal structure; thiohydantoin; crown ether.
CCDC reference: 2241205
Structure description
Compounds containing the thiohydantoin scaffold exhibit many pharmacological activities, including antimicrobial, anticarcinogenic, anti-inflammatory, antibacterial, anti-androgen and anti-diabetic effects (Meusel et al., 2004; Tomasic et al., 2009; Scholl et al. 1999; Vengurlekar et al. 2012; Jain et al. 2013; Efstathiou et al. 2015). As part of our ongoing work in this area (Guerrab et al. 2022a,b, 2023), the title compound (Fig. 1) was prepared and its is reported here.
The molecule adopts a cup-shaped conformation with the five-membered ring as the base and the C12–C17 benzene ring and the crown ether ring as the sides. This conformation is likely due to packing considerations since the three-dimensional structure is fairly compact with this arrangement (Fig. 2) but it may also be aided by the C5—H5B⋯N2 hydrogen bond (Table 1 and Fig. 1). The five-membered ring is almost planar (r.m.s. deviation = 0.009 Å) and the C12–C17 and C18–C23 benzene rings are inclined to it by 62.10 (7) and 61.35 (9)°, respectively. The conformation of the crown ether ring places S1, O2 and O3 pointing away from the center of the molecule, but O4 points towards it. Intramolecular C—H⋯O and C—H⋯N interactions occur (Table 1). In the crystal, zigzag chains of molecules extending along the a-axis direction are linked by C14—H14⋯O2 hydrogen bonds and these are connected into layers lying parallel to the ab plane by C6—H6A⋯Cg3 interactions (Table 1 and Fig. 2). The layers stack along the c-axis direction with normal van der Waals contacts (Fig. 3).
Synthesis and crystallization
To a solution of 5,5-diphenyl-2-thioxoimidazolidin-4-one (500 mg, 1.86 mmol), one equivalent of 1-chloro-2-{2-[2-(2-chloroethoxy)ethoxy]ethoxy}ethane (365 µl, 1.86 mmol) dissolved in absolute dimethylformamide (DMF, 10 ml) was added and the resulting solution heated under reflux for 4 h in the presence of two equivalents of K2CO3 (513 mg, 3.72 mmol). The reaction mixture was filtered while hot, and the solvent evaporated under reduced pressure. The residue obtained was dried and recrystallized from ethanol solution to yield colourless blocks of the title compound (Guerrab et al., 2018).
Refinement
Crystal data, data collection and structure . The crystal studied was refined as a two-component with a refined BASF value of 0.25 (7).
details are summarized in Table 2Structural data
CCDC reference: 2241205
https://doi.org/10.1107/S2414314623001256/hb4423sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314623001256/hb4423Isup2.hkl
Data collection: APEX3 (Bruker, 2016); cell
SAINT (Bruker, 2016); data reduction: SAINT (Bruker, 2016); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2018/1 (Sheldrick, 2015b); molecular graphics: DIAMOND (Brandenburg & Putz, 2012); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C23H26N2O4S | Dx = 1.335 Mg m−3 |
Mr = 426.52 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, Pna21 | Cell parameters from 8169 reflections |
a = 16.6007 (17) Å | θ = 2.5–28.1° |
b = 9.2362 (10) Å | µ = 0.19 mm−1 |
c = 13.8439 (14) Å | T = 150 K |
V = 2122.6 (4) Å3 | Block, colourless |
Z = 4 | 0.28 × 0.24 × 0.17 mm |
F(000) = 904 |
Bruker Smart APEX CCD diffractometer | 5219 independent reflections |
Radiation source: fine-focus sealed tube | 4568 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
Detector resolution: 8.3333 pixels mm-1 | θmax = 28.3°, θmin = 2.5° |
ω scans | h = −21→22 |
Absorption correction: multi-scan (SADABS; Krause et al., 2015) | k = −12→11 |
Tmin = 0.84, Tmax = 0.97 | l = −18→18 |
19152 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.036 | H-atom parameters constrained |
wR(F2) = 0.083 | w = 1/[σ2(Fo2) + (0.0489P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
5219 reflections | Δρmax = 0.42 e Å−3 |
272 parameters | Δρmin = −0.15 e Å−3 |
1 restraint | Absolute structure: Refined as an inversion twin. |
Primary atom site location: dual | Absolute structure parameter: 0.25 (7) |
Experimental. The diffraction data were collected in three sets of 363 frames (0.5° width in ω) at φ = 0, 120 and 240°. A scan time of 30 sec/frame was used. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms attached to carbon were placed in calculated positions (C—H = 0.95 - 0.99 Å). All were included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached atoms. Refinement in Pna21 with SHELXL resulted in a Flack parameter of ca 0.25 and the message `inversion twin or centrosymmetric space group'. As the intensity statistics and PLATON ADSYMM did not support a centrosymmetric space group, the refinement was finished in Pna21 treating the model as an inversion twin with the addition of the instructions TWIN and BASF 0.25. The refined value of BASF was 0.25 (7). |
x | y | z | Uiso*/Ueq | ||
S1 | 0.22326 (3) | 0.46089 (6) | 0.63964 (4) | 0.02584 (14) | |
O1 | 0.37107 (10) | 0.15624 (16) | 0.40483 (11) | 0.0262 (3) | |
O2 | 0.26905 (9) | 0.77584 (18) | 0.59446 (13) | 0.0305 (4) | |
O3 | 0.29439 (10) | 0.71630 (18) | 0.39376 (13) | 0.0332 (4) | |
O4 | 0.26344 (11) | 0.41717 (17) | 0.31948 (13) | 0.0311 (4) | |
N1 | 0.29066 (11) | 0.2903 (2) | 0.50682 (14) | 0.0221 (4) | |
N2 | 0.37902 (11) | 0.37283 (19) | 0.61953 (13) | 0.0220 (4) | |
C1 | 0.30600 (13) | 0.3719 (2) | 0.58992 (16) | 0.0212 (4) | |
C2 | 0.36224 (13) | 0.2330 (2) | 0.47512 (15) | 0.0209 (4) | |
C3 | 0.42545 (13) | 0.2866 (2) | 0.54857 (15) | 0.0201 (4) | |
C4 | 0.27256 (15) | 0.5931 (3) | 0.71517 (17) | 0.0293 (5) | |
H4A | 0.231310 | 0.644885 | 0.753541 | 0.035* | |
H4B | 0.308662 | 0.542256 | 0.760888 | 0.035* | |
C5 | 0.32084 (14) | 0.7016 (3) | 0.65901 (19) | 0.0310 (6) | |
H5A | 0.346442 | 0.771405 | 0.703764 | 0.037* | |
H5B | 0.363887 | 0.651719 | 0.622371 | 0.037* | |
C6 | 0.31097 (16) | 0.8699 (3) | 0.5306 (2) | 0.0346 (6) | |
H6A | 0.351600 | 0.924720 | 0.568061 | 0.041* | |
H6B | 0.272262 | 0.940579 | 0.503540 | 0.041* | |
C7 | 0.35286 (15) | 0.7933 (3) | 0.4482 (2) | 0.0350 (6) | |
H7A | 0.380465 | 0.864852 | 0.406480 | 0.042* | |
H7B | 0.393736 | 0.725386 | 0.473819 | 0.042* | |
C8 | 0.32854 (16) | 0.6518 (3) | 0.30959 (19) | 0.0326 (6) | |
H8A | 0.378561 | 0.599576 | 0.327050 | 0.039* | |
H8B | 0.342461 | 0.727969 | 0.262161 | 0.039* | |
C9 | 0.26965 (16) | 0.5486 (3) | 0.26582 (19) | 0.0341 (6) | |
H9A | 0.216034 | 0.595253 | 0.262729 | 0.041* | |
H9B | 0.286596 | 0.525951 | 0.198937 | 0.041* | |
C10 | 0.20222 (15) | 0.4167 (3) | 0.39115 (18) | 0.0302 (5) | |
H10A | 0.148380 | 0.414019 | 0.360436 | 0.036* | |
H10B | 0.205884 | 0.505135 | 0.431330 | 0.036* | |
C11 | 0.21474 (14) | 0.2835 (3) | 0.45276 (18) | 0.0268 (5) | |
H11A | 0.169351 | 0.273990 | 0.498704 | 0.032* | |
H11B | 0.215005 | 0.196608 | 0.410870 | 0.032* | |
C12 | 0.48827 (13) | 0.3867 (2) | 0.50146 (16) | 0.0205 (4) | |
C13 | 0.53956 (14) | 0.4642 (2) | 0.56242 (18) | 0.0263 (5) | |
H13 | 0.535967 | 0.451446 | 0.630374 | 0.032* | |
C14 | 0.59561 (15) | 0.5596 (2) | 0.52449 (19) | 0.0312 (6) | |
H14 | 0.630297 | 0.611768 | 0.566506 | 0.037* | |
C15 | 0.60130 (15) | 0.5791 (3) | 0.42553 (19) | 0.0330 (6) | |
H15 | 0.639361 | 0.645390 | 0.399664 | 0.040* | |
C16 | 0.55158 (16) | 0.5020 (3) | 0.36486 (19) | 0.0330 (6) | |
H16 | 0.555677 | 0.514677 | 0.296938 | 0.040* | |
C17 | 0.49500 (14) | 0.4052 (3) | 0.40275 (17) | 0.0272 (5) | |
H17 | 0.461081 | 0.351902 | 0.360427 | 0.033* | |
C18 | 0.46593 (13) | 0.1555 (2) | 0.59558 (16) | 0.0218 (5) | |
C19 | 0.46380 (15) | 0.1332 (3) | 0.69500 (18) | 0.0285 (5) | |
H19 | 0.438323 | 0.201865 | 0.735956 | 0.034* | |
C20 | 0.49917 (17) | 0.0100 (3) | 0.7340 (2) | 0.0377 (7) | |
H20 | 0.498233 | −0.004434 | 0.801960 | 0.045* | |
C21 | 0.53572 (16) | −0.0920 (3) | 0.6754 (2) | 0.0374 (6) | |
H21 | 0.558427 | −0.177220 | 0.702531 | 0.045* | |
C22 | 0.53873 (15) | −0.0684 (3) | 0.5777 (2) | 0.0334 (6) | |
H22 | 0.563913 | −0.137691 | 0.536929 | 0.040* | |
C23 | 0.50554 (15) | 0.0549 (3) | 0.53801 (18) | 0.0262 (5) | |
H23 | 0.509812 | 0.071219 | 0.470452 | 0.031* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0209 (2) | 0.0282 (3) | 0.0284 (3) | 0.0015 (2) | 0.0053 (2) | −0.0022 (3) |
O1 | 0.0308 (9) | 0.0251 (8) | 0.0227 (8) | 0.0017 (7) | −0.0012 (7) | −0.0063 (7) |
O2 | 0.0252 (8) | 0.0259 (9) | 0.0403 (10) | 0.0009 (7) | 0.0014 (7) | −0.0011 (7) |
O3 | 0.0290 (9) | 0.0309 (9) | 0.0398 (10) | −0.0008 (7) | 0.0031 (8) | −0.0067 (8) |
O4 | 0.0376 (10) | 0.0279 (9) | 0.0279 (9) | 0.0030 (7) | 0.0015 (8) | −0.0024 (7) |
N1 | 0.0206 (9) | 0.0232 (9) | 0.0224 (9) | −0.0002 (7) | −0.0003 (7) | −0.0022 (8) |
N2 | 0.0220 (9) | 0.0237 (9) | 0.0203 (10) | 0.0015 (7) | 0.0013 (7) | −0.0029 (7) |
C1 | 0.0239 (11) | 0.0186 (10) | 0.0212 (11) | 0.0000 (8) | 0.0025 (9) | 0.0006 (9) |
C2 | 0.0230 (11) | 0.0189 (10) | 0.0207 (10) | −0.0004 (8) | −0.0002 (9) | 0.0007 (8) |
C3 | 0.0229 (11) | 0.0191 (10) | 0.0183 (10) | 0.0010 (8) | −0.0003 (8) | −0.0027 (8) |
C4 | 0.0288 (13) | 0.0347 (13) | 0.0243 (12) | 0.0083 (10) | −0.0011 (10) | −0.0085 (10) |
C5 | 0.0243 (12) | 0.0293 (12) | 0.0394 (15) | 0.0043 (9) | −0.0049 (10) | −0.0108 (10) |
C6 | 0.0313 (13) | 0.0232 (12) | 0.0493 (17) | −0.0033 (10) | 0.0038 (12) | −0.0042 (11) |
C7 | 0.0315 (13) | 0.0313 (13) | 0.0420 (15) | −0.0067 (11) | 0.0035 (11) | −0.0012 (12) |
C8 | 0.0366 (14) | 0.0284 (13) | 0.0328 (14) | 0.0058 (11) | 0.0051 (11) | 0.0039 (11) |
C9 | 0.0403 (15) | 0.0377 (15) | 0.0244 (13) | 0.0057 (11) | −0.0031 (11) | 0.0031 (10) |
C10 | 0.0265 (12) | 0.0375 (14) | 0.0267 (12) | 0.0032 (10) | −0.0035 (10) | −0.0027 (11) |
C11 | 0.0214 (11) | 0.0293 (12) | 0.0298 (12) | −0.0037 (9) | −0.0046 (9) | −0.0051 (10) |
C12 | 0.0202 (10) | 0.0161 (10) | 0.0251 (11) | 0.0036 (8) | 0.0018 (9) | −0.0001 (8) |
C13 | 0.0254 (12) | 0.0234 (11) | 0.0301 (12) | 0.0002 (9) | −0.0004 (10) | −0.0049 (10) |
C14 | 0.0252 (12) | 0.0228 (11) | 0.0455 (15) | −0.0013 (9) | 0.0007 (11) | −0.0050 (11) |
C15 | 0.0233 (12) | 0.0261 (12) | 0.0495 (17) | 0.0021 (10) | 0.0071 (11) | 0.0114 (11) |
C16 | 0.0298 (13) | 0.0373 (14) | 0.0318 (13) | 0.0056 (11) | 0.0056 (10) | 0.0116 (11) |
C17 | 0.0253 (12) | 0.0302 (13) | 0.0262 (12) | 0.0021 (9) | −0.0005 (10) | 0.0024 (10) |
C18 | 0.0182 (10) | 0.0214 (10) | 0.0259 (11) | −0.0023 (8) | −0.0016 (9) | 0.0008 (9) |
C19 | 0.0262 (13) | 0.0341 (13) | 0.0253 (12) | −0.0017 (10) | 0.0012 (9) | 0.0007 (10) |
C20 | 0.0306 (14) | 0.0514 (16) | 0.0312 (14) | −0.0049 (12) | −0.0017 (11) | 0.0191 (13) |
C21 | 0.0243 (13) | 0.0309 (13) | 0.0569 (17) | 0.0005 (11) | −0.0038 (11) | 0.0162 (12) |
C22 | 0.0246 (12) | 0.0258 (12) | 0.0497 (17) | 0.0046 (10) | −0.0031 (12) | 0.0004 (12) |
C23 | 0.0252 (12) | 0.0259 (12) | 0.0274 (12) | 0.0015 (9) | 0.0003 (9) | −0.0007 (10) |
S1—C1 | 1.742 (2) | C9—H9A | 0.9900 |
S1—C4 | 1.804 (2) | C9—H9B | 0.9900 |
O1—C2 | 1.213 (3) | C10—C11 | 1.512 (3) |
O2—C5 | 1.417 (3) | C10—H10A | 0.9900 |
O2—C6 | 1.421 (3) | C10—H10B | 0.9900 |
O3—C7 | 1.420 (3) | C11—H11A | 0.9900 |
O3—C8 | 1.426 (3) | C11—H11B | 0.9900 |
O4—C10 | 1.420 (3) | C12—C17 | 1.382 (3) |
O4—C9 | 1.427 (3) | C12—C13 | 1.396 (3) |
N1—C2 | 1.373 (3) | C13—C14 | 1.385 (3) |
N1—C1 | 1.399 (3) | C13—H13 | 0.9500 |
N1—C11 | 1.467 (3) | C14—C15 | 1.385 (4) |
N2—C1 | 1.280 (3) | C14—H14 | 0.9500 |
N2—C3 | 1.481 (3) | C15—C16 | 1.376 (4) |
C2—C3 | 1.543 (3) | C15—H15 | 0.9500 |
C3—C18 | 1.531 (3) | C16—C17 | 1.399 (4) |
C3—C12 | 1.538 (3) | C16—H16 | 0.9500 |
C4—C5 | 1.501 (4) | C17—H17 | 0.9500 |
C4—H4A | 0.9900 | C18—C23 | 1.390 (3) |
C4—H4B | 0.9900 | C18—C19 | 1.392 (3) |
C5—H5A | 0.9900 | C19—C20 | 1.390 (4) |
C5—H5B | 0.9900 | C19—H19 | 0.9500 |
C6—C7 | 1.512 (4) | C20—C21 | 1.383 (4) |
C6—H6A | 0.9900 | C20—H20 | 0.9500 |
C6—H6B | 0.9900 | C21—C22 | 1.371 (4) |
C7—H7A | 0.9900 | C21—H21 | 0.9500 |
C7—H7B | 0.9900 | C22—C23 | 1.379 (3) |
C8—C9 | 1.494 (4) | C22—H22 | 0.9500 |
C8—H8A | 0.9900 | C23—H23 | 0.9500 |
C8—H8B | 0.9900 | ||
C1—S1—C4 | 100.98 (11) | C8—C9—H9A | 109.2 |
C5—O2—C6 | 113.00 (18) | O4—C9—H9B | 109.2 |
C7—O3—C8 | 111.80 (19) | C8—C9—H9B | 109.2 |
C10—O4—C9 | 114.71 (19) | H9A—C9—H9B | 107.9 |
C2—N1—C1 | 108.25 (18) | O4—C10—C11 | 107.34 (19) |
C2—N1—C11 | 124.32 (19) | O4—C10—H10A | 110.2 |
C1—N1—C11 | 126.81 (19) | C11—C10—H10A | 110.2 |
C1—N2—C3 | 106.09 (18) | O4—C10—H10B | 110.2 |
N2—C1—N1 | 116.06 (19) | C11—C10—H10B | 110.2 |
N2—C1—S1 | 128.12 (17) | H10A—C10—H10B | 108.5 |
N1—C1—S1 | 115.82 (16) | N1—C11—C10 | 111.8 (2) |
O1—C2—N1 | 125.9 (2) | N1—C11—H11A | 109.3 |
O1—C2—C3 | 129.4 (2) | C10—C11—H11A | 109.3 |
N1—C2—C3 | 104.72 (17) | N1—C11—H11B | 109.3 |
N2—C3—C18 | 111.83 (18) | C10—C11—H11B | 109.3 |
N2—C3—C12 | 108.13 (16) | H11A—C11—H11B | 107.9 |
C18—C3—C12 | 110.98 (17) | C17—C12—C13 | 119.0 (2) |
N2—C3—C2 | 104.83 (16) | C17—C12—C3 | 123.3 (2) |
C18—C3—C2 | 108.94 (17) | C13—C12—C3 | 117.72 (19) |
C12—C3—C2 | 112.00 (17) | C14—C13—C12 | 120.4 (2) |
C5—C4—S1 | 113.21 (17) | C14—C13—H13 | 119.8 |
C5—C4—H4A | 108.9 | C12—C13—H13 | 119.8 |
S1—C4—H4A | 108.9 | C13—C14—C15 | 120.3 (2) |
C5—C4—H4B | 108.9 | C13—C14—H14 | 119.9 |
S1—C4—H4B | 108.9 | C15—C14—H14 | 119.9 |
H4A—C4—H4B | 107.7 | C16—C15—C14 | 119.7 (2) |
O2—C5—C4 | 109.02 (19) | C16—C15—H15 | 120.1 |
O2—C5—H5A | 109.9 | C14—C15—H15 | 120.1 |
C4—C5—H5A | 109.9 | C15—C16—C17 | 120.3 (2) |
O2—C5—H5B | 109.9 | C15—C16—H16 | 119.8 |
C4—C5—H5B | 109.9 | C17—C16—H16 | 119.8 |
H5A—C5—H5B | 108.3 | C12—C17—C16 | 120.3 (2) |
O2—C6—C7 | 114.1 (2) | C12—C17—H17 | 119.9 |
O2—C6—H6A | 108.7 | C16—C17—H17 | 119.9 |
C7—C6—H6A | 108.7 | C23—C18—C19 | 118.7 (2) |
O2—C6—H6B | 108.7 | C23—C18—C3 | 119.5 (2) |
C7—C6—H6B | 108.7 | C19—C18—C3 | 121.7 (2) |
H6A—C6—H6B | 107.6 | C20—C19—C18 | 119.6 (2) |
O3—C7—C6 | 108.7 (2) | C20—C19—H19 | 120.2 |
O3—C7—H7A | 109.9 | C18—C19—H19 | 120.2 |
C6—C7—H7A | 109.9 | C21—C20—C19 | 121.0 (2) |
O3—C7—H7B | 109.9 | C21—C20—H20 | 119.5 |
C6—C7—H7B | 109.9 | C19—C20—H20 | 119.5 |
H7A—C7—H7B | 108.3 | C22—C21—C20 | 119.1 (3) |
O3—C8—C9 | 109.7 (2) | C22—C21—H21 | 120.4 |
O3—C8—H8A | 109.7 | C20—C21—H21 | 120.4 |
C9—C8—H8A | 109.7 | C21—C22—C23 | 120.6 (3) |
O3—C8—H8B | 109.7 | C21—C22—H22 | 119.7 |
C9—C8—H8B | 109.7 | C23—C22—H22 | 119.7 |
H8A—C8—H8B | 108.2 | C22—C23—C18 | 120.8 (2) |
O4—C9—C8 | 112.3 (2) | C22—C23—H23 | 119.6 |
O4—C9—H9A | 109.2 | C18—C23—H23 | 119.6 |
C3—N2—C1—N1 | 2.5 (2) | C2—N1—C11—C10 | −93.2 (3) |
C3—N2—C1—S1 | −176.97 (17) | C1—N1—C11—C10 | 76.6 (3) |
C2—N1—C1—N2 | −2.0 (3) | O4—C10—C11—N1 | 65.4 (2) |
C11—N1—C1—N2 | −173.2 (2) | N2—C3—C12—C17 | −125.5 (2) |
C2—N1—C1—S1 | 177.53 (15) | C18—C3—C12—C17 | 111.5 (2) |
C11—N1—C1—S1 | 6.3 (3) | C2—C3—C12—C17 | −10.5 (3) |
C4—S1—C1—N2 | 17.3 (2) | N2—C3—C12—C13 | 53.2 (2) |
C4—S1—C1—N1 | −162.16 (17) | C18—C3—C12—C13 | −69.8 (2) |
C1—N1—C2—O1 | 179.9 (2) | C2—C3—C12—C13 | 168.20 (18) |
C11—N1—C2—O1 | −8.7 (4) | C17—C12—C13—C14 | 0.8 (3) |
C1—N1—C2—C3 | 0.5 (2) | C3—C12—C13—C14 | −177.91 (19) |
C11—N1—C2—C3 | 172.0 (2) | C12—C13—C14—C15 | 0.1 (3) |
C1—N2—C3—C18 | −119.9 (2) | C13—C14—C15—C16 | −0.7 (4) |
C1—N2—C3—C12 | 117.66 (19) | C14—C15—C16—C17 | 0.5 (4) |
C1—N2—C3—C2 | −2.0 (2) | C13—C12—C17—C16 | −1.0 (3) |
O1—C2—C3—N2 | −178.5 (2) | C3—C12—C17—C16 | 177.6 (2) |
N1—C2—C3—N2 | 0.8 (2) | C15—C16—C17—C12 | 0.4 (4) |
O1—C2—C3—C18 | −58.6 (3) | N2—C3—C18—C23 | 173.82 (19) |
N1—C2—C3—C18 | 120.68 (19) | C12—C3—C18—C23 | −65.3 (3) |
O1—C2—C3—C12 | 64.5 (3) | C2—C3—C18—C23 | 58.4 (3) |
N1—C2—C3—C12 | −116.16 (19) | N2—C3—C18—C19 | −5.8 (3) |
C1—S1—C4—C5 | 64.68 (19) | C12—C3—C18—C19 | 115.1 (2) |
C6—O2—C5—C4 | −173.52 (18) | C2—C3—C18—C19 | −121.2 (2) |
S1—C4—C5—O2 | 59.4 (2) | C23—C18—C19—C20 | −1.7 (4) |
C5—O2—C6—C7 | 77.0 (3) | C3—C18—C19—C20 | 177.9 (2) |
C8—O3—C7—C6 | 174.8 (2) | C18—C19—C20—C21 | −0.8 (4) |
O2—C6—C7—O3 | 59.3 (3) | C19—C20—C21—C22 | 1.8 (4) |
C7—O3—C8—C9 | 168.7 (2) | C20—C21—C22—C23 | −0.3 (4) |
C10—O4—C9—C8 | 91.9 (3) | C21—C22—C23—C18 | −2.2 (4) |
O3—C8—C9—O4 | −74.9 (3) | C19—C18—C23—C22 | 3.2 (4) |
C9—O4—C10—C11 | −169.19 (19) | C3—C18—C23—C22 | −176.4 (2) |
Cg3 is the centroid of the C18–C23 benzene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5B···N2 | 0.99 | 2.59 | 3.233 (3) | 123 |
C10—H10B···O3 | 0.99 | 2.50 | 3.162 (3) | 124 |
C14—H14···O2i | 0.95 | 2.56 | 3.397 (3) | 148 |
C6—H6A···Cg3ii | 0.99 | 2.84 | 3.792 (3) | 162 |
Symmetry codes: (i) x+1/2, −y+3/2, z; (ii) x, y+1, z. |
Acknowledgements
JTM thanks Tulane University for support of the Tulane Crystallography Laboratory. Author contributions are as follows. Conceptualization, YR; methodology, WG and AA; investigation, WG and AEMAA; writing (original draft), JMT and YR; writing (review and editing of the manuscript), YR; formal analysis, AA and YR; supervision, YR; crystal-structure determination and validation, JTM.
Funding information
JTM thanks Tulane University for support of the Tulane Crystallography Laboratory.
References
Brandenburg, K. & Putz, H. (2012). DIAMOND, Crystal Impact GbR, Bonn, Germany. Google Scholar
Bruker (2016). APEX3 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Efstathiou, E., Titus, M., Wen, S., Hoang, A., Karlou, M., Ashe, R., Tu, S. M., Aparicio, A., Troncoso, P., Mohler, J. & Logothetis, C. J. (2015). Eur. Urol. 67, 53–60. CrossRef CAS PubMed Google Scholar
Guerrab, W., Akachar, J., El Jemli, M., Abudunia, A. M., Ouaabou, R., Alaoui, K., Ibrahimi, A. & Ramli, Y. (2022b). J. Biomol. Struct. Dyn. 40, https://doi.org/10.1080/07391102.2022.2069865 CSD CrossRef Google Scholar
Guerrab, W., El Jemli, M., Akachar, J., Demirtaş, G., Mague, J. T., Taoufik, J., Ibrahimi, A., Ansar, M., Alaoui, K. & Ramli, Y. (2022a). J. Biomol. Struct. Dyn. 40, 8765–8782. CSD CrossRef CAS PubMed Google Scholar
Guerrab, W., El Moutaouakil Ala Allah, A., Alsubari, A., Mague, J. T. J. & Ramli, Y. (2023). IUCrData, 8, x230060. Google Scholar
Guerrab, W., Mague, J. T., Taoufik, J. & Ramli, Y. (2018). IUCrData, 3, x180057. Google Scholar
Jain, V. S., Vora, D. K. & Ramaa, C. (2013). Bioorg. Med. Chem. 21, 1599–1620. CrossRef CAS PubMed Google Scholar
Krause, L., Herbst-Irmer, R., Sheldrick, G. M. & Stalke, D. (2015). J. Appl. Cryst. 48, 3–10. Web of Science CSD CrossRef ICSD CAS IUCr Journals Google Scholar
Meusel, M. & Gütschow, M. (2004). Org. Prep. Proced. Int. 36, 391–443. CrossRef CAS Google Scholar
Scholl, S., Koch, A., Henning, D., Kempter, G. & Kleinpeter, E. (1999). Struct. Chem. 10, 355–366. CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheldrick, G. M. (2015a). Acta Cryst. A71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2015b). Acta Cryst. C71, 3–8. Web of Science CrossRef IUCr Journals Google Scholar
Tomasić, T. & Masic, L. P. (2009). Curr. Med. Chem. 16, 1596–1629. Web of Science PubMed Google Scholar
Vengurlekar, S., Sharma, R. & Trivedi, P. (2012). Lett. Drug. Des. Discov. 9, 549–555. CAS Google Scholar
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