organic compounds
4-Fluoro-2-({[(2R)-1-hydroxy-1,1,3-triphenylpropan-2-yl]imino}methyl)phenol
aDepartment of Chemistry, Harvey Mudd College, 301 Platt Blvd., Claremont, CA 91711, USA
*Correspondence e-mail: adam_johnson@hmc.edu
The title compound, C28H24FNO2, crystallizes in the orthorhombic P212121. A hydrogen-bonding network between the tertiary alcohol group and the fluoro substituent results in [010] chains in the solid state.
Keywords: crystal structure; Schiff base; tridentate ligand; chiral molecule.
CCDC reference: 1970566
Structure description
We have synthesized a number of chiral imine diols by Schiff-base condensation of the corresponding salicylaldehydes with (S)- or (R)-2-amino-1,1,3-triphenylpropanol (Kang et al., 2004; Liu et al. 2004). These compounds serve as ligands for titanium for the asymmetric intramolecular hydroamination of aminoallenes (Sha et al., 2019). We routinely prepare both enantiomers of the ligands, and a number of them were examined by single-crystal X-ray diffraction, including the L-enantiomer of the title compound, in order to compare the structures of the free and bound ligand.
2-Hydroxy-5-fluoro-benzaldehyde 2S-(1,1,3-triphenylpropanol) imine, C28H24FNO2, crystallizes in the orthorhombic P212121 as shown in Fig. 1. The major structural features of the two enantiomers are similar, as expected. The L-enantiomer structure was collected at 100 K while the D-enantiomer was collected at 293 K. The unit-cell parameters in the current room-temperature structure are slightly larger (average 1.3%), presumably due to the higher temperature of the data collection. The parameter of −0.1 (3) has a large uncertainty but the was verified by synthesis and polarimetry.
The compound has the expected imine–phenol structure as opposed to the iminium–phenoxide tautomer seen in derivatives with less steric bulk. The C23–C28 phenol aromatic ring is close to co-planar with atoms O2 [deviation from the ring plane = 0.040 (2) Å], C22 [–0.061 (2) Å], N1 [–0.034 (2) Å] and C2 [–0.039 (2) Å]. These four atoms exhibit less deviation from the plane than the enantiomer. The C22—N1—C2—C1 torsion angle is 110.2 (2)°, which places atom O1 1.555 (2) Å above the plane of the ring. This deviation is 0.166 Å larger than that for the enantiomer at 100 K, although the torsion angle is almost identical.
The bonds between C27—C28, C23—C28 and C23—C24 are long at 1.39–1.41 Å while those between C24—C25, C25—C26 and C26—C27 are shorter at 1.36–1.37 Å. In contrast, the aromatic rings on the benzyl and phenyl substituents have typical C—C bond distances ranging from 1.37–1.39 Å. The aromatic C28—O2 bond at 1.349 (3) Å is substantially shorter than the aliphatic C1—O1 bond [1.439 (3) Å]. This bonding motif has been seen in related structures (Sha et al., 2019).
There is an intramolecular O2—H2⋯N1 hydrogen bond (Table 1) between the salicylaldehyde alcohol group and the imine nitrogen atom, which closes an S(6) ring and a long-range intermolecular hydrogen bond between the tertiary alcohol O1—H1 and the F1 atom of an adjacent molecule as shown in Fig. 2: the H⋯F and O⋯F distances are 2.94 and 3.720 (3) Å, respectively. Weak intermolecular C—H⋯F and C—H⋯O contacts are also observed.
Synthesis and crystallization
Preparative details of the material have been reported previously (Sha et al., 2019). Crystals in the form of light-yellow blocks were obtained by slow evaporation from the mixed solvents of hexane/ethyl acetate.
Refinement
Crystal data, data collection and structure .
details are summarized in Table 2Structural data
CCDC reference: 1970566
https://doi.org/10.1107/S2414314620015801/hb4369sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314620015801/hb4369Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2414314620015801/hb4369Isup3.cml
Data collection: CrysAlis PRO (Rigaku OD, 2019); cell
CrysAlis PRO (Rigaku OD, 2019); data reduction: CrysAlis PRO (Rigaku OD, 2019); program(s) used to solve structure: SHELXS (Sheldrick, 2008); program(s) used to refine structure: SHELXL (Sheldrick, 2015); molecular graphics: OLEX2 (Dolomanov et al., 2009) and CrystalMaker (Palmer, 2020); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).C28H24FNO2 | Dx = 1.221 Mg m−3 |
Mr = 425.48 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, P212121 | Cell parameters from 20629 reflections |
a = 6.0147 (2) Å | θ = 2.0–22.8° |
b = 18.8172 (4) Å | µ = 0.08 mm−1 |
c = 20.4530 (5) Å | T = 293 K |
V = 2314.87 (11) Å3 | Block, clear light yellow |
Z = 4 | 0.29 × 0.27 × 0.23 mm |
F(000) = 896 |
Rigaku XtaLAB Mini II diffractometer | 5721 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Rigaku (Mo) X-ray Source | 4529 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.044 |
Detector resolution: 10.0000 pixels mm-1 | θmax = 28.3°, θmin = 2.0° |
ω scans | h = −8→8 |
Absorption correction: analytical [CrysAlisPro (Rigaku OD, 2019); ABSPACK (Rigaku OD, 2017)] | k = −25→25 |
Tmin = 0.995, Tmax = 0.996 | l = −27→27 |
73250 measured reflections |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.045 | w = 1/[σ2(Fo2) + (0.0408P)2 + 0.2813P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.098 | (Δ/σ)max < 0.001 |
S = 1.03 | Δρmax = 0.14 e Å−3 |
5721 reflections | Δρmin = −0.15 e Å−3 |
291 parameters | Absolute structure: Flack x determined using 1550 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013) |
0 restraints | Absolute structure parameter: −0.1 (3) |
Primary atom site location: structure-invariant direct methods |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
F1 | 0.9178 (3) | 0.82714 (9) | 0.12710 (9) | 0.0962 (6) | |
O1 | 0.2298 (2) | 0.51725 (9) | 0.34826 (8) | 0.0552 (4) | |
H1 | 0.203611 | 0.474846 | 0.343181 | 0.083* | |
O2 | 0.2834 (3) | 0.62611 (10) | 0.17459 (9) | 0.0684 (5) | |
H2 | 0.328661 | 0.596034 | 0.200364 | 0.103* | |
N1 | 0.5550 (3) | 0.56695 (9) | 0.25587 (8) | 0.0413 (4) | |
C1 | 0.4599 (3) | 0.52649 (11) | 0.36563 (10) | 0.0398 (4) | |
C2 | 0.6059 (3) | 0.51204 (10) | 0.30374 (9) | 0.0386 (4) | |
H2A | 0.763405 | 0.515018 | 0.315703 | 0.046* | |
C3 | 0.5589 (4) | 0.43882 (11) | 0.27290 (10) | 0.0505 (5) | |
H3A | 0.581351 | 0.402322 | 0.305740 | 0.061* | |
H3B | 0.404359 | 0.436968 | 0.259445 | 0.061* | |
C4 | 0.7040 (4) | 0.42272 (10) | 0.21473 (10) | 0.0488 (5) | |
C5 | 0.6403 (5) | 0.44232 (13) | 0.15197 (12) | 0.0639 (7) | |
H5 | 0.505460 | 0.465438 | 0.145449 | 0.077* | |
C6 | 0.7771 (7) | 0.42755 (14) | 0.09884 (13) | 0.0835 (10) | |
H6 | 0.733148 | 0.441041 | 0.057053 | 0.100* | |
C7 | 0.9761 (7) | 0.39330 (17) | 0.10751 (18) | 0.0886 (11) | |
H7 | 1.067032 | 0.383652 | 0.071824 | 0.106* | |
C8 | 1.0393 (6) | 0.37362 (18) | 0.1685 (2) | 0.0909 (10) | |
H8 | 1.173814 | 0.350153 | 0.174553 | 0.109* | |
C9 | 0.9049 (5) | 0.38825 (15) | 0.22170 (14) | 0.0712 (7) | |
H9 | 0.951195 | 0.374498 | 0.263194 | 0.085* | |
C10 | 0.5143 (3) | 0.47796 (10) | 0.42366 (9) | 0.0402 (4) | |
C11 | 0.7181 (4) | 0.44477 (12) | 0.43239 (11) | 0.0495 (5) | |
H11 | 0.827905 | 0.449448 | 0.400675 | 0.059* | |
C12 | 0.7598 (5) | 0.40449 (12) | 0.48822 (11) | 0.0594 (6) | |
H12 | 0.896877 | 0.382316 | 0.493428 | 0.071* | |
C13 | 0.5999 (5) | 0.39739 (13) | 0.53549 (12) | 0.0657 (7) | |
H13 | 0.628493 | 0.370747 | 0.572854 | 0.079* | |
C14 | 0.3965 (5) | 0.42993 (14) | 0.52737 (11) | 0.0652 (7) | |
H14 | 0.287022 | 0.424937 | 0.559155 | 0.078* | |
C15 | 0.3550 (4) | 0.46988 (12) | 0.47220 (11) | 0.0520 (6) | |
H15 | 0.217525 | 0.491873 | 0.467401 | 0.062* | |
C16 | 0.4910 (4) | 0.60386 (11) | 0.38657 (10) | 0.0450 (5) | |
C17 | 0.6909 (5) | 0.62610 (12) | 0.41351 (12) | 0.0576 (6) | |
H17 | 0.803348 | 0.593111 | 0.420758 | 0.069* | |
C18 | 0.7254 (6) | 0.69653 (14) | 0.42975 (14) | 0.0764 (8) | |
H18 | 0.860574 | 0.710554 | 0.447662 | 0.092* | |
C19 | 0.5618 (7) | 0.74562 (15) | 0.41960 (19) | 0.0930 (11) | |
H19 | 0.584347 | 0.792885 | 0.431100 | 0.112* | |
C20 | 0.3641 (7) | 0.72472 (17) | 0.3923 (2) | 0.1065 (13) | |
H20 | 0.253617 | 0.758201 | 0.384393 | 0.128* | |
C21 | 0.3279 (5) | 0.65428 (15) | 0.37652 (17) | 0.0797 (9) | |
H21 | 0.191920 | 0.640668 | 0.358886 | 0.096* | |
C22 | 0.6980 (4) | 0.61408 (10) | 0.24233 (9) | 0.0405 (4) | |
H22 | 0.837032 | 0.612055 | 0.262127 | 0.049* | |
C23 | 0.6501 (4) | 0.67165 (10) | 0.19634 (10) | 0.0415 (5) | |
C24 | 0.8092 (4) | 0.72373 (12) | 0.18420 (11) | 0.0534 (6) | |
H24 | 0.944724 | 0.723285 | 0.206112 | 0.064* | |
C25 | 0.7621 (5) | 0.77581 (12) | 0.13918 (11) | 0.0600 (6) | |
C26 | 0.5670 (5) | 0.77790 (13) | 0.10519 (12) | 0.0649 (7) | |
H26 | 0.542130 | 0.813151 | 0.074170 | 0.078* | |
C27 | 0.4081 (5) | 0.72738 (13) | 0.11734 (12) | 0.0643 (7) | |
H27 | 0.274328 | 0.728610 | 0.094574 | 0.077* | |
C28 | 0.4451 (4) | 0.67427 (11) | 0.16341 (11) | 0.0494 (5) |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.1196 (15) | 0.0738 (10) | 0.0954 (12) | −0.0342 (10) | −0.0053 (12) | 0.0365 (9) |
O1 | 0.0371 (8) | 0.0709 (10) | 0.0577 (9) | −0.0053 (8) | −0.0042 (7) | 0.0022 (8) |
O2 | 0.0602 (11) | 0.0715 (11) | 0.0735 (12) | −0.0102 (9) | −0.0239 (9) | 0.0191 (9) |
N1 | 0.0450 (10) | 0.0434 (9) | 0.0355 (8) | −0.0008 (8) | −0.0026 (7) | 0.0031 (7) |
C1 | 0.0344 (10) | 0.0472 (11) | 0.0379 (10) | −0.0011 (9) | −0.0006 (9) | 0.0030 (8) |
C2 | 0.0407 (11) | 0.0398 (10) | 0.0354 (9) | −0.0013 (8) | 0.0003 (9) | 0.0055 (8) |
C3 | 0.0633 (15) | 0.0433 (11) | 0.0447 (11) | −0.0084 (11) | 0.0065 (11) | 0.0011 (9) |
C4 | 0.0647 (15) | 0.0364 (10) | 0.0451 (12) | −0.0073 (10) | 0.0022 (11) | −0.0033 (8) |
C5 | 0.0920 (19) | 0.0495 (12) | 0.0503 (14) | 0.0007 (14) | 0.0024 (14) | 0.0016 (11) |
C6 | 0.144 (3) | 0.0599 (15) | 0.0463 (14) | −0.013 (2) | 0.0211 (18) | 0.0026 (11) |
C7 | 0.108 (3) | 0.0727 (19) | 0.085 (2) | −0.018 (2) | 0.041 (2) | −0.0203 (17) |
C8 | 0.073 (2) | 0.090 (2) | 0.109 (3) | 0.0033 (18) | 0.013 (2) | −0.035 (2) |
C9 | 0.0765 (19) | 0.0720 (16) | 0.0652 (16) | 0.0083 (15) | −0.0036 (15) | −0.0167 (13) |
C10 | 0.0460 (12) | 0.0388 (10) | 0.0358 (10) | −0.0093 (9) | −0.0003 (9) | 0.0010 (8) |
C11 | 0.0504 (13) | 0.0506 (11) | 0.0476 (12) | −0.0049 (11) | −0.0025 (10) | 0.0081 (9) |
C12 | 0.0697 (17) | 0.0526 (13) | 0.0557 (14) | −0.0031 (12) | −0.0173 (14) | 0.0105 (11) |
C13 | 0.099 (2) | 0.0578 (14) | 0.0406 (12) | −0.0197 (15) | −0.0153 (14) | 0.0125 (11) |
C14 | 0.089 (2) | 0.0683 (15) | 0.0383 (12) | −0.0223 (15) | 0.0110 (13) | 0.0044 (11) |
C15 | 0.0564 (14) | 0.0538 (12) | 0.0458 (12) | −0.0077 (11) | 0.0086 (11) | −0.0009 (10) |
C16 | 0.0505 (13) | 0.0439 (11) | 0.0408 (10) | 0.0046 (10) | 0.0119 (10) | 0.0044 (9) |
C17 | 0.0706 (17) | 0.0487 (12) | 0.0537 (13) | −0.0050 (12) | −0.0038 (12) | −0.0010 (10) |
C18 | 0.098 (2) | 0.0607 (15) | 0.0702 (17) | −0.0204 (17) | 0.0091 (17) | −0.0113 (13) |
C19 | 0.122 (3) | 0.0468 (15) | 0.110 (3) | −0.0052 (19) | 0.050 (2) | −0.0141 (16) |
C20 | 0.103 (3) | 0.0553 (17) | 0.162 (4) | 0.0271 (19) | 0.033 (3) | 0.001 (2) |
C21 | 0.0665 (19) | 0.0636 (16) | 0.109 (2) | 0.0174 (15) | 0.0101 (17) | −0.0004 (16) |
C22 | 0.0433 (11) | 0.0440 (10) | 0.0342 (9) | −0.0007 (9) | −0.0013 (9) | 0.0033 (8) |
C23 | 0.0537 (13) | 0.0385 (10) | 0.0323 (9) | 0.0028 (9) | 0.0016 (9) | 0.0003 (8) |
C24 | 0.0629 (15) | 0.0514 (12) | 0.0458 (12) | −0.0055 (11) | −0.0026 (11) | 0.0075 (10) |
C25 | 0.0844 (18) | 0.0432 (12) | 0.0522 (13) | −0.0071 (12) | 0.0050 (14) | 0.0087 (10) |
C26 | 0.096 (2) | 0.0462 (12) | 0.0527 (14) | 0.0142 (14) | −0.0048 (15) | 0.0117 (10) |
C27 | 0.0745 (18) | 0.0602 (14) | 0.0581 (14) | 0.0113 (14) | −0.0164 (14) | 0.0101 (12) |
C28 | 0.0578 (14) | 0.0465 (11) | 0.0439 (11) | 0.0045 (11) | −0.0071 (11) | 0.0011 (9) |
F1—C25 | 1.368 (3) | C12—H12 | 0.9300 |
O1—H1 | 0.8200 | C12—C13 | 1.370 (4) |
O1—C1 | 1.439 (3) | C13—H13 | 0.9300 |
O2—H2 | 0.8200 | C13—C14 | 1.378 (4) |
O2—C28 | 1.349 (3) | C14—H14 | 0.9300 |
N1—C2 | 1.456 (2) | C14—C15 | 1.379 (3) |
N1—C22 | 1.266 (3) | C15—H15 | 0.9300 |
C1—C2 | 1.564 (3) | C16—C17 | 1.387 (3) |
C1—C10 | 1.533 (3) | C16—C21 | 1.380 (3) |
C1—C16 | 1.529 (3) | C17—H17 | 0.9300 |
C2—H2A | 0.9800 | C17—C18 | 1.382 (3) |
C2—C3 | 1.541 (3) | C18—H18 | 0.9300 |
C3—H3A | 0.9700 | C18—C19 | 1.365 (5) |
C3—H3B | 0.9700 | C19—H19 | 0.9300 |
C3—C4 | 1.506 (3) | C19—C20 | 1.371 (5) |
C4—C5 | 1.389 (3) | C20—H20 | 0.9300 |
C4—C9 | 1.379 (4) | C20—C21 | 1.382 (5) |
C5—H5 | 0.9300 | C21—H21 | 0.9300 |
C5—C6 | 1.391 (4) | C22—H22 | 0.9300 |
C6—H6 | 0.9300 | C22—C23 | 1.463 (3) |
C6—C7 | 1.371 (5) | C23—C24 | 1.392 (3) |
C7—H7 | 0.9300 | C23—C28 | 1.406 (3) |
C7—C8 | 1.355 (5) | C24—H24 | 0.9300 |
C8—H8 | 0.9300 | C24—C25 | 1.374 (3) |
C8—C9 | 1.384 (4) | C25—C26 | 1.364 (4) |
C9—H9 | 0.9300 | C26—H26 | 0.9300 |
C10—C11 | 1.387 (3) | C26—C27 | 1.371 (4) |
C10—C15 | 1.388 (3) | C27—H27 | 0.9300 |
C11—H11 | 0.9300 | C27—C28 | 1.391 (3) |
C11—C12 | 1.393 (3) | ||
C1—O1—H1 | 109.5 | C12—C13—H13 | 120.2 |
C28—O2—H2 | 109.5 | C12—C13—C14 | 119.7 (2) |
C22—N1—C2 | 120.07 (17) | C14—C13—H13 | 120.2 |
O1—C1—C2 | 108.61 (16) | C13—C14—H14 | 120.0 |
O1—C1—C10 | 108.93 (16) | C13—C14—C15 | 120.1 (2) |
O1—C1—C16 | 107.55 (17) | C15—C14—H14 | 120.0 |
C10—C1—C2 | 113.77 (16) | C10—C15—H15 | 119.3 |
C16—C1—C2 | 108.88 (15) | C14—C15—C10 | 121.4 (2) |
C16—C1—C10 | 108.92 (16) | C14—C15—H15 | 119.3 |
N1—C2—C1 | 107.61 (15) | C17—C16—C1 | 120.29 (19) |
N1—C2—H2A | 109.3 | C21—C16—C1 | 121.7 (2) |
N1—C2—C3 | 108.70 (16) | C21—C16—C17 | 117.9 (2) |
C1—C2—H2A | 109.3 | C16—C17—H17 | 119.5 |
C3—C2—C1 | 112.55 (16) | C18—C17—C16 | 121.0 (3) |
C3—C2—H2A | 109.3 | C18—C17—H17 | 119.5 |
C2—C3—H3A | 108.9 | C17—C18—H18 | 119.9 |
C2—C3—H3B | 108.9 | C19—C18—C17 | 120.3 (3) |
H3A—C3—H3B | 107.7 | C19—C18—H18 | 119.9 |
C4—C3—C2 | 113.37 (18) | C18—C19—H19 | 120.2 |
C4—C3—H3A | 108.9 | C18—C19—C20 | 119.5 (3) |
C4—C3—H3B | 108.9 | C20—C19—H19 | 120.2 |
C5—C4—C3 | 121.1 (2) | C19—C20—H20 | 119.8 |
C9—C4—C3 | 121.4 (2) | C19—C20—C21 | 120.5 (3) |
C9—C4—C5 | 117.5 (2) | C21—C20—H20 | 119.8 |
C4—C5—H5 | 119.8 | C16—C21—C20 | 120.9 (3) |
C4—C5—C6 | 120.4 (3) | C16—C21—H21 | 119.6 |
C6—C5—H5 | 119.8 | C20—C21—H21 | 119.6 |
C5—C6—H6 | 119.7 | N1—C22—H22 | 119.2 |
C7—C6—C5 | 120.6 (3) | N1—C22—C23 | 121.70 (19) |
C7—C6—H6 | 119.7 | C23—C22—H22 | 119.2 |
C6—C7—H7 | 120.2 | C24—C23—C22 | 120.0 (2) |
C8—C7—C6 | 119.5 (3) | C24—C23—C28 | 119.53 (19) |
C8—C7—H7 | 120.2 | C28—C23—C22 | 120.43 (19) |
C7—C8—H8 | 119.8 | C23—C24—H24 | 120.7 |
C7—C8—C9 | 120.4 (3) | C25—C24—C23 | 118.6 (2) |
C9—C8—H8 | 119.8 | C25—C24—H24 | 120.7 |
C4—C9—C8 | 121.6 (3) | F1—C25—C24 | 118.9 (3) |
C4—C9—H9 | 119.2 | C26—C25—F1 | 118.5 (2) |
C8—C9—H9 | 119.2 | C26—C25—C24 | 122.6 (2) |
C11—C10—C1 | 123.82 (18) | C25—C26—H26 | 120.4 |
C11—C10—C15 | 117.93 (19) | C25—C26—C27 | 119.2 (2) |
C15—C10—C1 | 118.15 (19) | C27—C26—H26 | 120.4 |
C10—C11—H11 | 119.7 | C26—C27—H27 | 119.7 |
C10—C11—C12 | 120.6 (2) | C26—C27—C28 | 120.6 (2) |
C12—C11—H11 | 119.7 | C28—C27—H27 | 119.7 |
C11—C12—H12 | 119.8 | O2—C28—C23 | 121.85 (19) |
C13—C12—C11 | 120.3 (3) | O2—C28—C27 | 118.8 (2) |
C13—C12—H12 | 119.8 | C27—C28—C23 | 119.3 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···N1 | 0.82 | 1.86 | 2.583 (3) | 147 |
O1—H1···F1i | 0.82 | 2.94 | 3.720 (3) | 160 |
C9—H9···F1ii | 0.93 | 2.54 | 3.467 (3) | 175 |
C14—H14···O2iii | 0.93 | 2.58 | 3.369 (3) | 142 |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+2, y−1/2, −z+1/2; (iii) −x+1/2, −y+1, z+1/2. |
Acknowledgements
The authors wish to thank Eric W. Reinheimer for technical support.
Funding information
Funding for this research was provided by: Harvey Mudd College.
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