organic compounds
1,1-Diphenyl-4-(thiophen-2-yl)but-3-yn-1-ol
aEscuela de Química, Universidad de Costa Rica, 2060 San José, Costa Rica, and bCentro de Electroquímica y Energía Química (CELEQ), Universidad de Costa Rica, 2060 San José, Costa Rica
*Correspondence e-mail: jorge.cabezas@ucr.ac.cr
The 20H16OS, contains two independent molecules comprising a hydroxy group, a 3-(2-thiophenyl)propargylic moiety and two aromatic rings linked to a central carbon atom. The two unique molecules are linked into a dimer by an O—H⋯O hydrogen bond. In one molecule, the thiophene ring is disordered over two orientations rotated by 180° with a refined occupancy ratio of 0.575 (4):0.425 (4). The is stabilized by O—H⋯π and C—H⋯π hydrogen-bond interactions. The crystal studied was a two-component non-merohedral twin, the refined ratio of the twin components being 0.575 (4):0.425 (4).
of the title homopropargyl alcohol, CKeywords: crystal structure; homopropargyl alcohols; 1,3-dilithiopropyne; propargylation; alkynes.
CCDC reference: 1873455
Structure description
1,1,4-Aromatic trisubstituted homopropargylic et al., 2017; Foley & Leighton, 2015; Francais et al., 2010; Hosseyni et al., 2016; Gao et al., 2014; Trost & Rhee 2003; Yadav & Maiti, 2002). In this work, the of the homopropargyl alcohol 1,1-diphenyl-4-(2-thiophenyl)-3-butyn-1-ol is reported.
are difficult to synthesize efficiently. They are very useful intermediates in the synthesis of a variety of organic compounds (KimThe title compound crystallizes with two molecules in the ). The lengths of the carbon–carbon triple bonds (C3_1—C4_1 and C3_2—C4_2) are 1.193 (5) and 1.189 (5) Å, respectively. The propargylic units (C4_1—C3_1—C2_1 and C4_2—C3_2—C2_2) exhibit angles of 176.4 (4) and 178.5 (4)°, slightly distorted from the expected linear geometry. The two molecules are linked by an O1_2—H1_2⋯O1_1 hydrogen bond (Fig. 1, Table 1), forming a dimeric unit. In the crystal (Fig. 2), molecules are linked into a three-dimensional network by O—H⋯π and C—H⋯π interactions (Table 1).
Each molecule contains a central carbon atom (C1_1 or C1_2) which is bound to a hydroxy group, a 3-(2-thiophenyl)propargylic fragment and two phenyl substituents, leading to a distorted tetrahedral geometry as it departs from the ideal value (109.5°) with angles spanning from 105.1 (3) to 114.0 (3)° (Fig. 1Synthesis and crystallization
The title compound was prepared in a one-pot reaction according to the previously reported procedure (Umaña & Cabezas, 2017). The product was purified by column chromatography and recrystallized from an ethyl ether:hexanes (1:1 v/v) solvent mixture to give colourless block-shaped crystals.
Refinement
Crystal data, data collection and structure . In the last cycles of an outlier (47) was omitted and enhanced rigid-bond restraints (RIGU instruction in SHELXL) were applied. The crystal used for the X-ray diffraction experiment was a two-component non-merohedral twin, the refined ratio of the twin components being 0.575 (4):0.425 (4). One thiophene ring is rotationally disordered by approximately 180° over two positions with a refined occupancy ratio 0.575 (4):0425 (4).
details are summarized in Table 2
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Structural data
CCDC reference: 1873455
https://doi.org/10.1107/S2414314618016164/rz4026sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314618016164/rz4026Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2414314618016164/rz4026Isup3.cml
Data collection: APEX3 (Bruker, 2017); cell
SAINT (Bruker, 2017); data reduction: SAINT (Bruker, 2017); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2017 (Sheldrick, 2015b); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: APEX3 (Bruker, 2017) and PLATON (Spek, 2009).C20H16OS | F(000) = 1280 |
Mr = 304.39 | Dx = 1.298 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 9.4240 (4) Å | Cell parameters from 9969 reflections |
b = 16.0262 (7) Å | θ = 2.5–24.9° |
c = 20.8913 (10) Å | µ = 0.21 mm−1 |
β = 99.042 (1)° | T = 100 K |
V = 3116.0 (2) Å3 | Block, colorless |
Z = 8 | 0.35 × 0.25 × 0.15 mm |
Bruker D8 VENTURE diffractometer | 6312 independent reflections |
Radiation source: sealed tube, Siemens KFFMO2K-90 | 3628 reflections with I > 2σ(I) |
Curved graphite monochromator | Rint = 0.020 |
Detector resolution: 10.4167 pixels mm-1 | θmax = 25.4°, θmin = 2.5° |
ω and φ scans | h = −11→11 |
Absorption correction: multi-scan (SADABS; Krause et al., 2015) | k = 0→19 |
Tmin = 0.665, Tmax = 0.746 | l = 0→25 |
6312 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.074 | Hydrogen site location: mixed |
wR(F2) = 0.137 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0291P)2 + 3.993P] where P = (Fo2 + 2Fc2)/3 |
6312 reflections | (Δ/σ)max < 0.001 |
423 parameters | Δρmax = 0.36 e Å−3 |
363 restraints | Δρmin = −0.36 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refined as a 2-component non-merohedral twin. Twin ratio: 0.1944 (18), Disorder is present in the sulfur position of the second molecule. This sulfur is also present at the site of C6, and C6 is present at S1. The SOF for the primary positions of S1 and C6 is 0.575 (4), The hydroxy H atoms were located in a difference Fourier map and refined isotropically with Uiso(H) = 1.5 Ueq(O). All other H atoms were placed geometrically and refined using a riding atom approximation, with C–H = 0.95–0.99 Å and with Uiso(H) = 1.2 Ueq(C). |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
S1_1 | 0.89408 (11) | 0.25822 (7) | 0.55877 (5) | 0.0256 (3) | |
O1_1 | 0.5644 (3) | 0.40979 (17) | 0.34584 (12) | 0.0193 (6) | |
H1_1 | 0.569 (4) | 0.463 (3) | 0.3412 (18) | 0.029* | |
C1_1 | 0.6758 (4) | 0.3760 (2) | 0.31374 (17) | 0.0149 (8) | |
C2_1 | 0.8186 (4) | 0.4171 (2) | 0.34297 (16) | 0.0196 (9) | |
H2A_1 | 0.896007 | 0.396352 | 0.320101 | 0.024* | |
H2AB_1 | 0.811096 | 0.478233 | 0.33639 | 0.024* | |
C3_1 | 0.8565 (4) | 0.3994 (2) | 0.41259 (18) | 0.0199 (9) | |
C4_1 | 0.8800 (4) | 0.3829 (2) | 0.46898 (18) | 0.0177 (9) | |
C5_1 | 0.9078 (4) | 0.3615 (2) | 0.53574 (17) | 0.0161 (8) | |
C6_1 | 0.9475 (4) | 0.4114 (2) | 0.58869 (17) | 0.0175 (9) | |
H6_1 | 0.96169 | 0.469944 | 0.586297 | 0.021* | |
C7_1 | 0.9651 (4) | 0.3658 (2) | 0.64742 (18) | 0.0210 (9) | |
H7_1 | 0.991389 | 0.390781 | 0.688811 | 0.025* | |
C8_1 | 0.9406 (4) | 0.2829 (3) | 0.63877 (18) | 0.0229 (9) | |
H8_1 | 0.948374 | 0.243351 | 0.673037 | 0.027* | |
C9_1 | 0.6712 (4) | 0.2825 (2) | 0.32478 (16) | 0.0160 (8) | |
C10_1 | 0.7942 (4) | 0.2332 (2) | 0.33579 (17) | 0.0222 (9) | |
H10_1 | 0.886056 | 0.258288 | 0.337602 | 0.027* | |
C11_1 | 0.7836 (5) | 0.1480 (3) | 0.34412 (18) | 0.0279 (10) | |
H11_1 | 0.868351 | 0.115014 | 0.351931 | 0.034* | |
C12_1 | 0.6509 (5) | 0.1103 (3) | 0.34117 (18) | 0.0301 (10) | |
H12_1 | 0.643741 | 0.051672 | 0.346339 | 0.036* | |
C13_1 | 0.5290 (5) | 0.1592 (3) | 0.33062 (18) | 0.0281 (10) | |
H13_1 | 0.437325 | 0.133861 | 0.328996 | 0.034* | |
C14_1 | 0.5385 (4) | 0.2441 (2) | 0.32240 (17) | 0.0212 (9) | |
H14_1 | 0.453305 | 0.276686 | 0.31503 | 0.025* | |
C15_1 | 0.6432 (4) | 0.3940 (2) | 0.24053 (16) | 0.0153 (8) | |
C16_1 | 0.7410 (4) | 0.3718 (2) | 0.20010 (17) | 0.0185 (9) | |
H16_1 | 0.829414 | 0.346388 | 0.21813 | 0.022* | |
C17_1 | 0.7116 (4) | 0.3860 (2) | 0.13419 (17) | 0.0216 (9) | |
H17_1 | 0.7792 | 0.370121 | 0.107161 | 0.026* | |
C18_1 | 0.5834 (4) | 0.4235 (2) | 0.10747 (18) | 0.0214 (9) | |
H18_1 | 0.563912 | 0.43478 | 0.062299 | 0.026* | |
C19_1 | 0.4846 (4) | 0.4444 (2) | 0.14678 (17) | 0.0206 (9) | |
H19_1 | 0.395939 | 0.469208 | 0.128469 | 0.025* | |
C20_1 | 0.5136 (4) | 0.4295 (2) | 0.21297 (17) | 0.0178 (9) | |
H20_1 | 0.444227 | 0.443605 | 0.239592 | 0.021* | |
S1_2 | 0.1569 (7) | 0.2927 (3) | 0.2463 (2) | 0.0216 (9) | 0.575 (4) |
S1'_2 | 0.1245 (12) | 0.4662 (5) | 0.2240 (4) | 0.0219 (14) | 0.425 (4) |
O1_2 | 0.5308 (3) | 0.37527 (17) | 0.47711 (12) | 0.0218 (7) | |
H1_2 | 0.519 (4) | 0.373 (2) | 0.436 (2) | 0.033* | |
C1_2 | 0.4005 (4) | 0.3526 (2) | 0.49912 (16) | 0.0169 (8) | |
C2_2 | 0.2812 (4) | 0.4146 (2) | 0.47095 (16) | 0.0198 (9) | |
H2A_2 | 0.194854 | 0.404279 | 0.491382 | 0.024* | |
H2AB_2 | 0.314341 | 0.472185 | 0.482032 | 0.024* | |
C3_2 | 0.2420 (4) | 0.4077 (2) | 0.40064 (18) | 0.0192 (9) | |
C4_2 | 0.2097 (4) | 0.4002 (2) | 0.34357 (18) | 0.0199 (9) | |
C5_2 | 0.1691 (4) | 0.3879 (3) | 0.27521 (17) | 0.0200 (9) | |
C6_2 | 0.133 (3) | 0.4500 (14) | 0.2293 (12) | 0.023 (4) | 0.575 (4) |
H6_2 | 0.131394 | 0.50824 | 0.237789 | 0.028* | 0.575 (4) |
C6'_2 | 0.162 (4) | 0.3085 (17) | 0.2360 (13) | 0.027 (5) | 0.425 (4) |
H6'_2 | 0.189015 | 0.254826 | 0.253066 | 0.032* | 0.425 (4) |
C7_2 | 0.0954 (4) | 0.4089 (3) | 0.16213 (19) | 0.0252 (10) | |
H7_2 | 0.066807 | 0.437284 | 0.122265 | 0.03* | |
C8_2 | 0.1100 (4) | 0.3262 (3) | 0.16962 (18) | 0.0242 (10) | |
H8_2 | 0.094788 | 0.288821 | 0.133892 | 0.029* | |
C9_2 | 0.3636 (4) | 0.2613 (2) | 0.48320 (16) | 0.0166 (8) | |
C10_2 | 0.2235 (4) | 0.2333 (2) | 0.46501 (17) | 0.0217 (9) | |
H10_2 | 0.146325 | 0.27216 | 0.459849 | 0.026* | |
C11_2 | 0.1956 (5) | 0.1489 (3) | 0.45433 (18) | 0.0285 (10) | |
H11_2 | 0.099719 | 0.130536 | 0.440926 | 0.034* | |
C12_2 | 0.3065 (5) | 0.0914 (3) | 0.46307 (18) | 0.0284 (10) | |
H12_2 | 0.28691 | 0.033578 | 0.457095 | 0.034* | |
C13_2 | 0.4461 (5) | 0.1192 (3) | 0.48061 (18) | 0.0268 (10) | |
H13_2 | 0.522966 | 0.080209 | 0.485778 | 0.032* | |
C14_2 | 0.4746 (4) | 0.2031 (2) | 0.49067 (17) | 0.0219 (9) | |
H14_2 | 0.571003 | 0.221311 | 0.502822 | 0.026* | |
C15_2 | 0.4281 (4) | 0.3632 (2) | 0.57297 (16) | 0.0151 (8) | |
C16_2 | 0.3218 (4) | 0.3432 (2) | 0.60937 (17) | 0.0186 (9) | |
H16_2 | 0.231595 | 0.323301 | 0.588148 | 0.022* | |
C17_2 | 0.3449 (4) | 0.3519 (2) | 0.67595 (17) | 0.0189 (9) | |
H17_2 | 0.271062 | 0.337854 | 0.700221 | 0.023* | |
C18_2 | 0.4758 (4) | 0.3811 (2) | 0.70726 (17) | 0.0199 (9) | |
H18_2 | 0.491857 | 0.387674 | 0.753018 | 0.024* | |
C19_2 | 0.5828 (4) | 0.4005 (2) | 0.67169 (17) | 0.0185 (9) | |
H19_2 | 0.673068 | 0.420244 | 0.693028 | 0.022* | |
C20_2 | 0.5590 (4) | 0.3914 (2) | 0.60476 (17) | 0.0166 (8) | |
H20_2 | 0.633345 | 0.404736 | 0.580596 | 0.02* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1_1 | 0.0310 (6) | 0.0225 (6) | 0.0220 (5) | −0.0020 (5) | 0.0003 (4) | 0.0024 (5) |
O1_1 | 0.0234 (15) | 0.0185 (15) | 0.0175 (14) | 0.0029 (13) | 0.0080 (11) | −0.0002 (12) |
C1_1 | 0.0135 (19) | 0.018 (2) | 0.0140 (18) | 0.0011 (16) | 0.0045 (15) | −0.0005 (16) |
C2_1 | 0.022 (2) | 0.021 (2) | 0.016 (2) | −0.0040 (18) | 0.0014 (16) | 0.0030 (16) |
C3_1 | 0.017 (2) | 0.021 (2) | 0.021 (2) | −0.0035 (18) | 0.0023 (16) | −0.0008 (17) |
C4_1 | 0.012 (2) | 0.022 (2) | 0.0185 (19) | −0.0017 (17) | 0.0012 (16) | −0.0031 (16) |
C5_1 | 0.012 (2) | 0.017 (2) | 0.0192 (19) | −0.0001 (17) | 0.0027 (16) | 0.0004 (15) |
C6_1 | 0.013 (2) | 0.021 (2) | 0.017 (2) | −0.0002 (17) | −0.0005 (16) | −0.0007 (16) |
C7_1 | 0.014 (2) | 0.030 (2) | 0.019 (2) | 0.0028 (18) | 0.0025 (16) | −0.0004 (17) |
C8_1 | 0.020 (2) | 0.031 (2) | 0.018 (2) | 0.0059 (19) | 0.0054 (17) | 0.0096 (17) |
C9_1 | 0.023 (2) | 0.018 (2) | 0.0081 (19) | 0.0033 (16) | 0.0045 (16) | 0.0003 (15) |
C10_1 | 0.026 (2) | 0.024 (2) | 0.018 (2) | 0.0050 (18) | 0.0085 (17) | 0.0014 (17) |
C11_1 | 0.039 (3) | 0.026 (2) | 0.019 (2) | 0.015 (2) | 0.0068 (19) | 0.0023 (18) |
C12_1 | 0.057 (3) | 0.016 (2) | 0.019 (2) | 0.001 (2) | 0.009 (2) | −0.0002 (17) |
C13_1 | 0.040 (3) | 0.024 (2) | 0.021 (2) | −0.010 (2) | 0.006 (2) | −0.0034 (18) |
C14_1 | 0.027 (2) | 0.020 (2) | 0.017 (2) | −0.0009 (18) | 0.0034 (17) | 0.0002 (17) |
C15_1 | 0.023 (2) | 0.012 (2) | 0.0101 (18) | −0.0034 (16) | 0.0011 (15) | 0.0004 (15) |
C16_1 | 0.015 (2) | 0.024 (2) | 0.0160 (19) | 0.0024 (17) | 0.0014 (15) | 0.0036 (17) |
C17_1 | 0.023 (2) | 0.026 (2) | 0.017 (2) | −0.0051 (18) | 0.0077 (17) | −0.0025 (17) |
C18_1 | 0.027 (2) | 0.023 (2) | 0.014 (2) | −0.0082 (19) | −0.0016 (17) | 0.0008 (17) |
C19_1 | 0.021 (2) | 0.019 (2) | 0.020 (2) | 0.0028 (18) | −0.0015 (16) | 0.0022 (17) |
C20_1 | 0.020 (2) | 0.017 (2) | 0.0166 (19) | −0.0005 (17) | 0.0027 (16) | −0.0002 (16) |
S1_2 | 0.0247 (18) | 0.0207 (19) | 0.0177 (16) | 0.0029 (14) | −0.0013 (12) | −0.0034 (11) |
S1'_2 | 0.024 (3) | 0.023 (3) | 0.016 (2) | 0.0003 (19) | −0.0058 (17) | 0.0051 (15) |
O1_2 | 0.0211 (15) | 0.0330 (17) | 0.0128 (13) | −0.0020 (13) | 0.0068 (12) | 0.0039 (13) |
C1_2 | 0.017 (2) | 0.023 (2) | 0.0107 (18) | 0.0007 (17) | 0.0027 (15) | 0.0012 (16) |
C2_2 | 0.022 (2) | 0.022 (2) | 0.0146 (19) | 0.0030 (18) | −0.0002 (17) | 0.0030 (16) |
C3_2 | 0.014 (2) | 0.024 (2) | 0.019 (2) | 0.0025 (18) | 0.0030 (16) | 0.0025 (17) |
C4_2 | 0.010 (2) | 0.029 (2) | 0.022 (2) | 0.0003 (17) | 0.0027 (16) | 0.0042 (17) |
C5_2 | 0.014 (2) | 0.029 (2) | 0.0165 (19) | −0.0015 (18) | 0.0024 (16) | 0.0023 (17) |
C6_2 | 0.028 (10) | 0.023 (7) | 0.020 (6) | −0.004 (6) | 0.008 (6) | −0.003 (4) |
C6'_2 | 0.026 (10) | 0.024 (7) | 0.029 (6) | −0.007 (7) | −0.003 (7) | 0.003 (5) |
C7_2 | 0.019 (2) | 0.033 (3) | 0.023 (2) | 0.000 (2) | 0.0023 (17) | 0.0048 (18) |
C8_2 | 0.017 (2) | 0.038 (3) | 0.017 (2) | 0.000 (2) | 0.0010 (17) | −0.0071 (18) |
C9_2 | 0.023 (2) | 0.021 (2) | 0.0053 (18) | 0.0002 (17) | 0.0001 (15) | −0.0001 (15) |
C10_2 | 0.023 (2) | 0.026 (2) | 0.015 (2) | 0.0020 (18) | 0.0014 (17) | 0.0008 (17) |
C11_2 | 0.032 (2) | 0.034 (3) | 0.018 (2) | −0.005 (2) | 0.0007 (18) | −0.0039 (19) |
C12_2 | 0.046 (3) | 0.019 (2) | 0.020 (2) | −0.004 (2) | 0.004 (2) | −0.0049 (18) |
C13_2 | 0.036 (2) | 0.024 (2) | 0.019 (2) | 0.004 (2) | 0.0011 (19) | −0.0017 (18) |
C14_2 | 0.026 (2) | 0.024 (2) | 0.014 (2) | 0.0026 (18) | −0.0010 (17) | 0.0001 (17) |
C15_2 | 0.018 (2) | 0.014 (2) | 0.0136 (18) | 0.0049 (16) | 0.0034 (15) | 0.0002 (15) |
C16_2 | 0.016 (2) | 0.024 (2) | 0.0152 (19) | 0.0015 (18) | 0.0016 (15) | 0.0012 (17) |
C17_2 | 0.022 (2) | 0.022 (2) | 0.015 (2) | 0.0012 (18) | 0.0070 (16) | 0.0007 (16) |
C18_2 | 0.028 (2) | 0.019 (2) | 0.0126 (19) | 0.0027 (18) | 0.0017 (16) | −0.0017 (16) |
C19_2 | 0.018 (2) | 0.017 (2) | 0.019 (2) | 0.0014 (17) | −0.0025 (16) | −0.0032 (16) |
C20_2 | 0.015 (2) | 0.016 (2) | 0.020 (2) | −0.0015 (17) | 0.0042 (16) | 0.0035 (16) |
S1_1—C8_1 | 1.706 (4) | S1'_2—C5_2 | 1.660 (7) |
S1_1—C5_1 | 1.734 (4) | O1_2—C1_2 | 1.424 (4) |
O1_1—C1_1 | 1.437 (4) | O1_2—H1_2 | 0.85 (4) |
O1_1—H1_1 | 0.85 (4) | C1_2—C9_2 | 1.528 (5) |
C1_1—C9_1 | 1.518 (5) | C1_2—C15_2 | 1.533 (5) |
C1_1—C2_1 | 1.536 (5) | C1_2—C2_2 | 1.547 (5) |
C1_1—C15_1 | 1.539 (5) | C2_2—C3_2 | 1.461 (5) |
C2_1—C3_1 | 1.470 (5) | C2_2—H2A_2 | 0.99 |
C2_1—H2A_1 | 0.99 | C2_2—H2AB_2 | 0.99 |
C2_1—H2AB_1 | 0.99 | C3_2—C4_2 | 1.189 (5) |
C3_1—C4_1 | 1.193 (5) | C4_2—C5_2 | 1.433 (5) |
C4_1—C5_1 | 1.420 (5) | C5_2—C6_2 | 1.388 (18) |
C5_1—C6_1 | 1.369 (5) | C5_2—C6'_2 | 1.51 (3) |
C6_1—C7_1 | 1.415 (5) | C6_2—C7_2 | 1.54 (3) |
C6_1—H6_1 | 0.95 | C6_2—H6_2 | 0.95 |
C7_1—C8_1 | 1.356 (5) | C6'_2—C8_2 | 1.43 (3) |
C7_1—H7_1 | 0.95 | C6'_2—H6'_2 | 0.95 |
C8_1—H8_1 | 0.95 | C7_2—C8_2 | 1.339 (5) |
C9_1—C14_1 | 1.389 (5) | C7_2—H7_2 | 0.95 |
C9_1—C10_1 | 1.392 (5) | C8_2—H8_2 | 0.95 |
C10_1—C11_1 | 1.383 (5) | C9_2—C10_2 | 1.390 (5) |
C10_1—H10_1 | 0.95 | C9_2—C14_2 | 1.391 (5) |
C11_1—C12_1 | 1.381 (6) | C10_2—C11_2 | 1.389 (5) |
C11_1—H11_1 | 0.95 | C10_2—H10_2 | 0.95 |
C12_1—C13_1 | 1.379 (6) | C11_2—C12_2 | 1.383 (6) |
C12_1—H12_1 | 0.95 | C11_2—H11_2 | 0.95 |
C13_1—C14_1 | 1.376 (5) | C12_2—C13_2 | 1.382 (6) |
C13_1—H13_1 | 0.95 | C12_2—H12_2 | 0.95 |
C14_1—H14_1 | 0.95 | C13_2—C14_2 | 1.381 (5) |
C15_1—C20_1 | 1.387 (5) | C13_2—H13_2 | 0.95 |
C15_1—C16_1 | 1.391 (5) | C14_2—H14_2 | 0.95 |
C16_1—C17_1 | 1.380 (5) | C15_2—C20_2 | 1.382 (5) |
C16_1—H16_1 | 0.95 | C15_2—C16_2 | 1.387 (5) |
C17_1—C18_1 | 1.386 (5) | C16_2—C17_2 | 1.381 (5) |
C17_1—H17_1 | 0.95 | C16_2—H16_2 | 0.95 |
C18_1—C19_1 | 1.376 (5) | C17_2—C18_2 | 1.384 (5) |
C18_1—H18_1 | 0.95 | C17_2—H17_2 | 0.95 |
C19_1—C20_1 | 1.387 (5) | C18_2—C19_2 | 1.379 (5) |
C19_1—H19_1 | 0.95 | C18_2—H18_2 | 0.95 |
C20_1—H20_1 | 0.95 | C19_2—C20_2 | 1.388 (5) |
S1_2—C5_2 | 1.640 (7) | C19_2—H19_2 | 0.95 |
S1_2—C8_2 | 1.681 (6) | C20_2—H20_2 | 0.95 |
S1'_2—C7_2 | 1.574 (11) | ||
C8_1—S1_1—C5_1 | 91.83 (19) | C9_2—C1_2—C15_2 | 108.8 (3) |
C1_1—O1_1—H1_1 | 106 (3) | O1_2—C1_2—C2_2 | 109.0 (3) |
O1_1—C1_1—C9_1 | 105.1 (3) | C9_2—C1_2—C2_2 | 113.9 (3) |
O1_1—C1_1—C2_1 | 108.2 (3) | C15_2—C1_2—C2_2 | 108.0 (3) |
C9_1—C1_1—C2_1 | 114.0 (3) | C3_2—C2_2—C1_2 | 112.8 (3) |
O1_1—C1_1—C15_1 | 110.3 (3) | C3_2—C2_2—H2A_2 | 109.0 |
C9_1—C1_1—C15_1 | 109.3 (3) | C1_2—C2_2—H2A_2 | 109.0 |
C2_1—C1_1—C15_1 | 109.9 (3) | C3_2—C2_2—H2AB_2 | 109.0 |
C3_1—C2_1—C1_1 | 111.8 (3) | C1_2—C2_2—H2AB_2 | 109.0 |
C3_1—C2_1—H2A_1 | 109.3 | H2A_2—C2_2—H2AB_2 | 107.8 |
C1_1—C2_1—H2A_1 | 109.3 | C4_2—C3_2—C2_2 | 178.5 (4) |
C3_1—C2_1—H2AB_1 | 109.3 | C3_2—C4_2—C5_2 | 177.8 (4) |
C1_1—C2_1—H2AB_1 | 109.3 | C6_2—C5_2—C4_2 | 126.1 (12) |
H2A_1—C2_1—H2AB_1 | 107.9 | C4_2—C5_2—C6'_2 | 129.6 (10) |
C4_1—C3_1—C2_1 | 176.4 (4) | C6_2—C5_2—S1_2 | 114.7 (11) |
C3_1—C4_1—C5_1 | 178.7 (4) | C4_2—C5_2—S1_2 | 119.2 (3) |
C6_1—C5_1—C4_1 | 129.6 (4) | C4_2—C5_2—S1'_2 | 122.7 (4) |
C6_1—C5_1—S1_1 | 110.9 (3) | C6'_2—C5_2—S1'_2 | 107.6 (10) |
C4_1—C5_1—S1_1 | 119.6 (3) | C5_2—C6_2—C7_2 | 108.6 (16) |
C5_1—C6_1—C7_1 | 112.2 (4) | C5_2—C6_2—H6_2 | 125.7 |
C5_1—C6_1—H6_1 | 123.9 | C7_2—C6_2—H6_2 | 125.7 |
C7_1—C6_1—H6_1 | 123.9 | C8_2—C6'_2—C5_2 | 109.8 (16) |
C8_1—C7_1—C6_1 | 113.4 (4) | C8_2—C6'_2—H6'_2 | 125.1 |
C8_1—C7_1—H7_1 | 123.3 | C5_2—C6'_2—H6'_2 | 125.1 |
C6_1—C7_1—H7_1 | 123.3 | C8_2—C7_2—C6_2 | 108.2 (8) |
C7_1—C8_1—S1_1 | 111.7 (3) | C8_2—C7_2—S1'_2 | 118.7 (4) |
C7_1—C8_1—H8_1 | 124.2 | C8_2—C7_2—H7_2 | 125.9 |
S1_1—C8_1—H8_1 | 124.2 | C6_2—C7_2—H7_2 | 125.9 |
C14_1—C9_1—C10_1 | 118.4 (4) | C7_2—C8_2—C6'_2 | 108.9 (12) |
C14_1—C9_1—C1_1 | 118.7 (3) | C7_2—C8_2—S1_2 | 115.7 (4) |
C10_1—C9_1—C1_1 | 122.9 (3) | C7_2—C8_2—H8_2 | 122.1 |
C11_1—C10_1—C9_1 | 120.5 (4) | S1_2—C8_2—H8_2 | 122.1 |
C11_1—C10_1—H10_1 | 119.8 | C10_2—C9_2—C14_2 | 118.7 (4) |
C9_1—C10_1—H10_1 | 119.8 | C10_2—C9_2—C1_2 | 122.8 (3) |
C12_1—C11_1—C10_1 | 120.6 (4) | C14_2—C9_2—C1_2 | 118.4 (3) |
C12_1—C11_1—H11_1 | 119.7 | C11_2—C10_2—C9_2 | 120.3 (4) |
C10_1—C11_1—H11_1 | 119.7 | C11_2—C10_2—H10_2 | 119.8 |
C13_1—C12_1—C11_1 | 119.0 (4) | C9_2—C10_2—H10_2 | 119.8 |
C13_1—C12_1—H12_1 | 120.5 | C12_2—C11_2—C10_2 | 120.5 (4) |
C11_1—C12_1—H12_1 | 120.5 | C12_2—C11_2—H11_2 | 119.7 |
C14_1—C13_1—C12_1 | 120.8 (4) | C10_2—C11_2—H11_2 | 119.7 |
C14_1—C13_1—H13_1 | 119.6 | C13_2—C12_2—C11_2 | 119.2 (4) |
C12_1—C13_1—H13_1 | 119.6 | C13_2—C12_2—H12_2 | 120.4 |
C13_1—C14_1—C9_1 | 120.7 (4) | C11_2—C12_2—H12_2 | 120.4 |
C13_1—C14_1—H14_1 | 119.7 | C14_2—C13_2—C12_2 | 120.5 (4) |
C9_1—C14_1—H14_1 | 119.7 | C14_2—C13_2—H13_2 | 119.7 |
C20_1—C15_1—C16_1 | 118.5 (3) | C12_2—C13_2—H13_2 | 119.7 |
C20_1—C15_1—C1_1 | 121.0 (3) | C13_2—C14_2—C9_2 | 120.7 (4) |
C16_1—C15_1—C1_1 | 120.5 (3) | C13_2—C14_2—H14_2 | 119.7 |
C17_1—C16_1—C15_1 | 121.0 (3) | C9_2—C14_2—H14_2 | 119.7 |
C17_1—C16_1—H16_1 | 119.5 | C20_2—C15_2—C16_2 | 118.6 (3) |
C15_1—C16_1—H16_1 | 119.5 | C20_2—C15_2—C1_2 | 121.1 (3) |
C16_1—C17_1—C18_1 | 120.0 (4) | C16_2—C15_2—C1_2 | 120.2 (3) |
C16_1—C17_1—H17_1 | 120.0 | C17_2—C16_2—C15_2 | 121.1 (4) |
C18_1—C17_1—H17_1 | 120.0 | C17_2—C16_2—H16_2 | 119.5 |
C19_1—C18_1—C17_1 | 119.6 (3) | C15_2—C16_2—H16_2 | 119.5 |
C19_1—C18_1—H18_1 | 120.2 | C16_2—C17_2—C18_2 | 119.9 (4) |
C17_1—C18_1—H18_1 | 120.2 | C16_2—C17_2—H17_2 | 120.1 |
C18_1—C19_1—C20_1 | 120.5 (4) | C18_2—C17_2—H17_2 | 120.1 |
C18_1—C19_1—H19_1 | 119.8 | C19_2—C18_2—C17_2 | 119.7 (3) |
C20_1—C19_1—H19_1 | 119.8 | C19_2—C18_2—H18_2 | 120.2 |
C19_1—C20_1—C15_1 | 120.4 (4) | C17_2—C18_2—H18_2 | 120.2 |
C19_1—C20_1—H20_1 | 119.8 | C18_2—C19_2—C20_2 | 120.2 (4) |
C15_1—C20_1—H20_1 | 119.8 | C18_2—C19_2—H19_2 | 119.9 |
C5_2—S1_2—C8_2 | 92.7 (3) | C20_2—C19_2—H19_2 | 119.9 |
C7_2—S1'_2—C5_2 | 94.7 (5) | C15_2—C20_2—C19_2 | 120.6 (3) |
C1_2—O1_2—H1_2 | 109 (3) | C15_2—C20_2—H20_2 | 119.7 |
O1_2—C1_2—C9_2 | 110.6 (3) | C19_2—C20_2—H20_2 | 119.7 |
O1_2—C1_2—C15_2 | 106.2 (3) |
Cg1, Cg2 and Cg3 are the centroids of the C15_2–C20_2, C15_1–C20_1 and S1_1/C5_1–C8_1 rings, respectively; Cg4 is the centroid of the disordered S1_2/S1'_2/C6_2/C6'_2/C5_2/C7_2/C8_2 thiophene ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1_2—H1_2···O1_1 | 0.85 (4) | 2.08 (4) | 2.864 (4) | 153 (4) |
O1_1—H1_1···Cg1i | 0.86 (5) | 2.69 (5) | 3.516 (3) | 162 (4) |
C8_1—H8_1···Cg2ii | 0.95 | 2.88 | 3.489 (5) | 123 |
C8_2—H8_2···Cg1iii | 0.95 | 2.92 | 3.519 (5) | 123 |
C16_2—H16_2···Cg3iv | 0.95 | 2.86 | 3.648 (4) | 141 |
C20_2—H20_2···Cg3 | 0.95 | 2.99 | 3.658 (4) | 129 |
C16_1—H16_1···Cg4v | 0.95 | 2.92 | 3.679 (6) | 137 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x+1/2, −y+1/2, z+1/2; (iii) x−1/2, −y+1/2, z−1/2; (iv) x−1, y, z; (v) x+1, y, z. |
Acknowledgements
Dr Bruce Noll (Bruker, Madison, USA) is greatly acknowledged for his assistance in solving the disorder in the crystal structure.
Funding information
We thank the Sistema de Estudios de Posgrado (SEP), Universidad de Costa Rica (UCR) for a stipend to CAU, and the Vicerrectoría de Investigación (UCR) for financial support.
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