organic compounds
Ethyl 2-{[2-(2-ethoxy-2-oxoethoxy)quinolin-4-yl]carbonyloxy}acetate
aLaboratoire de Chimie Organique Hétérocyclique, Centre de Recherche Des Sciences des Médicaments, Pôle de Compétence Pharmacochimie, Av Ibn Battouta, BP 1014, Faculté des Sciences, Université Mohammed V, Rabat, Morocco, and bDepartment of Chemistry, Tulane University, New Orleans, LA 70118, USA
*Correspondence e-mail: Bouzianyounes@gmail.com
The conformation of the 2-ethoxy-2-oxoethoxy side chain, including a gauche Ce—O—C—C3 [72.46 (16)°] (e = ethoxy) unit, in the title compound, C18H19NO7, is partly determined by an intramolecular C—H⋯O hydrogen bond. In the crystal, C—H⋯O hydrogen bonds and C—H⋯π interactions arising from the same methylene group form chains extending along the a-axis direction.
Keywords: crystal structure; quinoline; hydrogen bond; C—H⋯π.
CCDC reference: 1872739
Structure description
Quinoline derivatives have various biological properties including antibacterial (Kidwai et al., 2000) antiviral (Wathen et al., 2002), anticancer (Chen et al., 2013) and antimalarial (Kunin & Ellise, 2000) activity. As part of our studies in this area, we now describe the synthesis and structure of the title compound.
As expected, the quinoline core of the molecule is almost planar (r.m.s. deviation = 0.0149) with N1 deviating by the largest amount [0.0272 (9) Å]. The orientation of the inner portion of the side chain emanating from C7 is partially determined by an intramolecular C5—H5⋯O5 hydrogen bond (Fig. 1 and Table 1). In the crystal, the molecules form chains extending along the a-axis direction through a combination of C10—H10A⋯O2 hydrogen bonds and C10—H10B⋯Cg2 interactions (Table 1 and Fig. 2). The chains pack with intercalation of the shorter side chains on one side and the longer ones on the other and with the quinoline moieties alternately up and down from one chain to the next (Fig. 3).
Synthesis and crystallization
A solution of 0.8 g (4.23 mmol) of 2-oxo-1,2-dihydroquinoline-4-carboxylic acid in 25 ml of DMF was mixed with 0.94 ml (8.46 mmol) ethyl bromoacetate, 1.17 g (8.46 mmol) K2CO3 and 0.13 g (0.423 mmol) tetra-n-butylammonium bromide (TBAB). The reaction mixture was stirred at room temperature in DMF for 24 h. After removal of salts by filtration, the DMF was evaporated under reduced pressure and the residue obtained was dissolved in dichloromethane. The organic phase was dried over Na2SO4 then concentrated in vacuo. The resulting mixture was chromatographed on a silica gel column [eluent: ethyl acetate/hexane (1/9)]. Colourless blocks were obtained when the solvent was allowed to evaporate (yield: 20%).
Refinement
Crystal data, data collection and structure .
details are summarized in Table 2Structural data
CCDC reference: 1872739
https://doi.org/10.1107/S2414314618014384/hb4265sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314618014384/hb4265Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2414314618014384/hb4265Isup3.cdx
Supporting information file. DOI: https://doi.org/10.1107/S2414314618014384/hb4265Isup4.cml
Data collection: APEX3 (Bruker, 2016); cell
SAINT (Bruker, 2016); data reduction: SAINT (Bruker, 2016); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2018/1 (Sheldrick, 2015b); molecular graphics: DIAMOND (Brandenburg & Putz, 2012); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C18H19NO7 | Z = 2 |
Mr = 361.34 | F(000) = 380 |
Triclinic, P1 | Dx = 1.381 Mg m−3 |
a = 4.9417 (2) Å | Cu Kα radiation, λ = 1.54178 Å |
b = 7.6157 (3) Å | Cell parameters from 5397 reflections |
c = 23.4472 (9) Å | θ = 3.8–74.5° |
α = 94.490 (2)° | µ = 0.91 mm−1 |
β = 92.997 (2)° | T = 150 K |
γ = 98.136 (2)° | Block, colourless |
V = 869.06 (6) Å3 | 0.19 × 0.14 × 0.08 mm |
Bruker D8 VENTURE PHOTON 100 CMOS diffractometer | 3301 independent reflections |
Radiation source: INCOATEC IµS micro–focus source | 2894 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.023 |
Detector resolution: 10.4167 pixels mm-1 | θmax = 74.5°, θmin = 3.8° |
ω scans | h = −5→6 |
Absorption correction: multi-scan (SADABS; Krause et al., 2015) | k = −9→9 |
Tmin = 0.85, Tmax = 0.93 | l = −27→29 |
6827 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.037 | All H-atom parameters refined |
wR(F2) = 0.099 | w = 1/[σ2(Fo2) + (0.0479P)2 + 0.2771P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
3301 reflections | Δρmax = 0.29 e Å−3 |
312 parameters | Δρmin = −0.19 e Å−3 |
0 restraints | Extinction correction: SHELXL-2018/1 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0144 (10) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.9795 (2) | 0.19616 (13) | 0.19654 (4) | 0.0298 (2) | |
O2 | 0.6525 (2) | 0.10059 (14) | 0.09687 (4) | 0.0347 (3) | |
O3 | 0.9762 (2) | 0.24142 (13) | 0.04573 (4) | 0.0314 (2) | |
O4 | 0.3329 (3) | 0.15037 (15) | 0.35154 (5) | 0.0549 (4) | |
O5 | 0.3071 (2) | 0.43440 (13) | 0.37905 (4) | 0.0317 (2) | |
O6 | 0.5808 (2) | 0.31430 (16) | 0.46977 (5) | 0.0409 (3) | |
O7 | 0.1851 (2) | 0.22790 (15) | 0.50923 (4) | 0.0370 (3) | |
N1 | 0.7797 (2) | 0.45027 (15) | 0.19139 (5) | 0.0264 (3) | |
C1 | 0.6133 (3) | 0.56258 (17) | 0.21529 (5) | 0.0253 (3) | |
C2 | 0.5848 (3) | 0.71671 (19) | 0.18733 (6) | 0.0322 (3) | |
H2 | 0.691 (4) | 0.735 (2) | 0.1526 (8) | 0.041 (5)* | |
C3 | 0.4194 (3) | 0.83331 (19) | 0.20776 (6) | 0.0348 (3) | |
H3 | 0.403 (4) | 0.937 (3) | 0.1890 (8) | 0.043 (5)* | |
C4 | 0.2734 (3) | 0.80006 (19) | 0.25639 (6) | 0.0341 (3) | |
H4 | 0.157 (4) | 0.883 (3) | 0.2708 (8) | 0.046 (5)* | |
C5 | 0.2999 (3) | 0.65216 (19) | 0.28472 (6) | 0.0304 (3) | |
H5 | 0.198 (4) | 0.632 (2) | 0.3188 (8) | 0.042 (5)* | |
C6 | 0.4736 (3) | 0.53005 (17) | 0.26569 (5) | 0.0250 (3) | |
C7 | 0.5175 (3) | 0.37093 (17) | 0.29200 (5) | 0.0258 (3) | |
C8 | 0.6876 (3) | 0.26321 (18) | 0.26838 (6) | 0.0266 (3) | |
H8 | 0.720 (3) | 0.155 (2) | 0.2853 (7) | 0.035 (4)* | |
C9 | 0.8144 (3) | 0.31020 (17) | 0.21775 (5) | 0.0246 (3) | |
C10 | 1.0894 (3) | 0.2362 (2) | 0.14312 (6) | 0.0291 (3) | |
H10A | 1.229 (4) | 0.163 (2) | 0.1374 (7) | 0.040 (5)* | |
H10B | 1.164 (3) | 0.363 (2) | 0.1426 (7) | 0.032 (4)* | |
C11 | 0.8761 (3) | 0.18459 (17) | 0.09398 (6) | 0.0257 (3) | |
C12 | 0.7954 (3) | 0.1969 (2) | −0.00618 (6) | 0.0393 (4) | |
H12A | 0.743 (4) | 0.062 (3) | −0.0114 (8) | 0.052 (5)* | |
H12B | 0.632 (4) | 0.253 (3) | −0.0010 (8) | 0.052 (5)* | |
C13 | 0.9522 (4) | 0.2659 (3) | −0.05472 (7) | 0.0476 (4) | |
H13A | 1.130 (5) | 0.207 (3) | −0.0576 (10) | 0.072 (7)* | |
H13B | 0.832 (5) | 0.235 (3) | −0.0907 (10) | 0.070 (7)* | |
H13C | 1.009 (5) | 0.394 (3) | −0.0492 (10) | 0.066 (6)* | |
C14 | 0.3772 (3) | 0.30534 (19) | 0.34306 (6) | 0.0309 (3) | |
C15 | 0.1559 (3) | 0.3732 (2) | 0.42636 (6) | 0.0339 (3) | |
H15A | 0.005 (4) | 0.282 (3) | 0.4126 (8) | 0.042 (5)* | |
H15B | 0.094 (4) | 0.479 (3) | 0.4439 (8) | 0.043 (5)* | |
C16 | 0.3364 (3) | 0.30131 (18) | 0.46988 (6) | 0.0273 (3) | |
C17 | 0.3261 (3) | 0.1532 (2) | 0.55576 (7) | 0.0376 (4) | |
H17A | 0.341 (4) | 0.031 (3) | 0.5435 (8) | 0.052 (5)* | |
H17B | 0.506 (4) | 0.219 (3) | 0.5618 (8) | 0.047 (5)* | |
C18 | 0.1607 (4) | 0.1651 (2) | 0.60672 (7) | 0.0403 (4) | |
H18A | 0.249 (4) | 0.113 (3) | 0.6388 (9) | 0.058 (6)* | |
H18B | −0.019 (4) | 0.104 (3) | 0.5980 (8) | 0.050 (5)* | |
H18C | 0.158 (5) | 0.296 (3) | 0.6203 (10) | 0.069 (7)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0316 (5) | 0.0373 (5) | 0.0231 (5) | 0.0121 (4) | 0.0057 (4) | 0.0030 (4) |
O2 | 0.0276 (5) | 0.0424 (6) | 0.0325 (5) | 0.0004 (4) | 0.0062 (4) | −0.0021 (4) |
O3 | 0.0311 (5) | 0.0395 (5) | 0.0225 (5) | 0.0015 (4) | 0.0016 (4) | 0.0026 (4) |
O4 | 0.0931 (10) | 0.0301 (6) | 0.0388 (6) | −0.0094 (6) | 0.0309 (6) | 0.0011 (5) |
O5 | 0.0359 (5) | 0.0364 (5) | 0.0256 (5) | 0.0087 (4) | 0.0141 (4) | 0.0053 (4) |
O6 | 0.0265 (5) | 0.0575 (7) | 0.0419 (6) | 0.0097 (5) | 0.0125 (4) | 0.0108 (5) |
O7 | 0.0269 (5) | 0.0550 (7) | 0.0322 (5) | 0.0067 (4) | 0.0076 (4) | 0.0185 (5) |
N1 | 0.0264 (5) | 0.0309 (6) | 0.0215 (5) | 0.0026 (4) | 0.0019 (4) | 0.0021 (4) |
C1 | 0.0249 (6) | 0.0277 (6) | 0.0218 (6) | 0.0015 (5) | −0.0017 (5) | −0.0010 (5) |
C2 | 0.0378 (8) | 0.0332 (7) | 0.0250 (7) | 0.0013 (6) | 0.0016 (6) | 0.0061 (5) |
C3 | 0.0440 (8) | 0.0274 (7) | 0.0322 (7) | 0.0055 (6) | −0.0067 (6) | 0.0039 (6) |
C4 | 0.0369 (8) | 0.0305 (7) | 0.0339 (8) | 0.0089 (6) | −0.0044 (6) | −0.0055 (6) |
C5 | 0.0320 (7) | 0.0331 (7) | 0.0251 (7) | 0.0032 (6) | 0.0034 (6) | −0.0029 (5) |
C6 | 0.0250 (6) | 0.0261 (6) | 0.0217 (6) | −0.0002 (5) | −0.0021 (5) | −0.0012 (5) |
C7 | 0.0268 (6) | 0.0278 (6) | 0.0208 (6) | −0.0018 (5) | 0.0019 (5) | −0.0007 (5) |
C8 | 0.0310 (7) | 0.0269 (6) | 0.0213 (6) | 0.0029 (5) | 0.0011 (5) | 0.0018 (5) |
C9 | 0.0240 (6) | 0.0292 (6) | 0.0199 (6) | 0.0033 (5) | −0.0001 (5) | −0.0004 (5) |
C10 | 0.0245 (6) | 0.0410 (8) | 0.0230 (7) | 0.0074 (6) | 0.0057 (5) | 0.0016 (5) |
C11 | 0.0250 (6) | 0.0275 (6) | 0.0257 (7) | 0.0079 (5) | 0.0057 (5) | −0.0006 (5) |
C12 | 0.0373 (8) | 0.0537 (10) | 0.0257 (7) | 0.0070 (7) | −0.0040 (6) | −0.0009 (6) |
C13 | 0.0662 (12) | 0.0509 (10) | 0.0253 (8) | 0.0065 (9) | 0.0009 (8) | 0.0049 (7) |
C14 | 0.0345 (7) | 0.0309 (7) | 0.0253 (7) | −0.0017 (6) | 0.0064 (6) | −0.0013 (5) |
C15 | 0.0299 (7) | 0.0479 (9) | 0.0264 (7) | 0.0073 (6) | 0.0128 (6) | 0.0094 (6) |
C16 | 0.0268 (7) | 0.0290 (6) | 0.0267 (7) | 0.0046 (5) | 0.0094 (5) | 0.0001 (5) |
C17 | 0.0367 (8) | 0.0459 (9) | 0.0349 (8) | 0.0153 (7) | 0.0064 (6) | 0.0138 (7) |
C18 | 0.0368 (8) | 0.0522 (10) | 0.0323 (8) | 0.0047 (7) | 0.0024 (7) | 0.0097 (7) |
O1—C9 | 1.3577 (15) | C6—C7 | 1.4401 (19) |
O1—C10 | 1.4285 (16) | C7—C8 | 1.3633 (19) |
O2—C11 | 1.2036 (17) | C7—C14 | 1.4988 (19) |
O3—C11 | 1.3367 (16) | C8—C9 | 1.4180 (18) |
O3—C12 | 1.4598 (17) | C8—H8 | 0.972 (18) |
O4—C14 | 1.2035 (19) | C10—C11 | 1.5092 (19) |
O5—C14 | 1.3399 (17) | C10—H10A | 0.954 (19) |
O5—C15 | 1.4405 (16) | C10—H10B | 0.983 (17) |
O6—C16 | 1.1978 (17) | C12—C13 | 1.498 (2) |
O7—C16 | 1.3259 (17) | C12—H12A | 1.02 (2) |
O7—C17 | 1.4593 (18) | C12—H12B | 0.97 (2) |
N1—C9 | 1.3012 (17) | C13—H13A | 1.05 (2) |
N1—C1 | 1.3762 (17) | C13—H13B | 1.00 (2) |
C1—C2 | 1.4090 (19) | C13—H13C | 0.97 (2) |
C1—C6 | 1.4201 (19) | C15—C16 | 1.506 (2) |
C2—C3 | 1.366 (2) | C15—H15A | 0.96 (2) |
C2—H2 | 1.001 (18) | C15—H15B | 0.97 (2) |
C3—C4 | 1.402 (2) | C17—C18 | 1.486 (2) |
C3—H3 | 0.943 (19) | C17—H17A | 0.97 (2) |
C4—C5 | 1.370 (2) | C17—H17B | 0.95 (2) |
C4—H4 | 0.966 (19) | C18—H18A | 0.99 (2) |
C5—C6 | 1.4152 (19) | C18—H18B | 0.95 (2) |
C5—H5 | 0.978 (19) | C18—H18C | 1.03 (3) |
C9—O1—C10 | 115.23 (10) | O2—C11—C10 | 125.79 (12) |
C11—O3—C12 | 116.03 (11) | O3—C11—C10 | 109.56 (11) |
C14—O5—C15 | 115.02 (11) | O3—C12—C13 | 106.86 (13) |
C16—O7—C17 | 117.59 (11) | O3—C12—H12A | 108.1 (11) |
C9—N1—C1 | 117.42 (11) | C13—C12—H12A | 111.8 (11) |
N1—C1—C2 | 116.81 (12) | O3—C12—H12B | 108.2 (12) |
N1—C1—C6 | 123.38 (12) | C13—C12—H12B | 112.1 (12) |
C2—C1—C6 | 119.81 (12) | H12A—C12—H12B | 109.6 (16) |
C3—C2—C1 | 120.40 (13) | C12—C13—H13A | 109.5 (13) |
C3—C2—H2 | 123.1 (10) | C12—C13—H13B | 108.0 (13) |
C1—C2—H2 | 116.5 (10) | H13A—C13—H13B | 110.2 (18) |
C2—C3—C4 | 120.43 (13) | C12—C13—H13C | 112.1 (13) |
C2—C3—H3 | 119.8 (11) | H13A—C13—H13C | 107.2 (19) |
C4—C3—H3 | 119.7 (11) | H13B—C13—H13C | 109.8 (19) |
C5—C4—C3 | 120.31 (13) | O4—C14—O5 | 122.56 (13) |
C5—C4—H4 | 119.4 (11) | O4—C14—C7 | 123.18 (13) |
C3—C4—H4 | 120.3 (11) | O5—C14—C7 | 114.25 (12) |
C4—C5—C6 | 121.04 (13) | O5—C15—C16 | 111.47 (11) |
C4—C5—H5 | 118.9 (11) | O5—C15—H15A | 110.1 (11) |
C6—C5—H5 | 120.0 (11) | C16—C15—H15A | 109.7 (11) |
C5—C6—C1 | 117.97 (12) | O5—C15—H15B | 104.6 (11) |
C5—C6—C7 | 125.85 (12) | C16—C15—H15B | 108.7 (11) |
C1—C6—C7 | 116.16 (12) | H15A—C15—H15B | 112.2 (15) |
C8—C7—C6 | 119.62 (12) | O6—C16—O7 | 125.43 (13) |
C8—C7—C14 | 115.35 (12) | O6—C16—C15 | 124.80 (13) |
C6—C7—C14 | 124.95 (12) | O7—C16—C15 | 109.73 (11) |
C7—C8—C9 | 118.76 (12) | O7—C17—C18 | 107.62 (12) |
C7—C8—H8 | 121.0 (10) | O7—C17—H17A | 108.0 (12) |
C9—C8—H8 | 120.2 (10) | C18—C17—H17A | 111.4 (12) |
N1—C9—O1 | 119.94 (11) | O7—C17—H17B | 107.5 (12) |
N1—C9—C8 | 124.63 (12) | C18—C17—H17B | 113.4 (12) |
O1—C9—C8 | 115.43 (11) | H17A—C17—H17B | 108.7 (16) |
O1—C10—C11 | 111.20 (11) | C17—C18—H18A | 109.5 (12) |
O1—C10—H10A | 106.4 (11) | C17—C18—H18B | 110.4 (12) |
C11—C10—H10A | 107.0 (11) | H18A—C18—H18B | 109.9 (17) |
O1—C10—H10B | 112.6 (9) | C17—C18—H18C | 109.8 (13) |
C11—C10—H10B | 109.0 (10) | H18A—C18—H18C | 106.2 (18) |
H10A—C10—H10B | 110.5 (15) | H18B—C18—H18C | 111.0 (17) |
O2—C11—O3 | 124.61 (12) | ||
C9—N1—C1—C2 | 177.99 (12) | C10—O1—C9—C8 | 175.21 (11) |
C9—N1—C1—C6 | −1.91 (18) | C7—C8—C9—N1 | −0.3 (2) |
N1—C1—C2—C3 | 178.82 (13) | C7—C8—C9—O1 | −179.63 (11) |
C6—C1—C2—C3 | −1.3 (2) | C9—O1—C10—C11 | −76.01 (14) |
C1—C2—C3—C4 | −0.8 (2) | C12—O3—C11—O2 | 0.38 (19) |
C2—C3—C4—C5 | 1.5 (2) | C12—O3—C11—C10 | 178.34 (12) |
C3—C4—C5—C6 | −0.1 (2) | O1—C10—C11—O2 | −8.81 (19) |
C4—C5—C6—C1 | −1.89 (19) | O1—C10—C11—O3 | 173.25 (10) |
C4—C5—C6—C7 | 179.92 (12) | C11—O3—C12—C13 | −177.61 (13) |
N1—C1—C6—C5 | −177.54 (12) | C15—O5—C14—O4 | −4.6 (2) |
C2—C1—C6—C5 | 2.56 (18) | C15—O5—C14—C7 | 176.06 (11) |
N1—C1—C6—C7 | 0.83 (18) | C8—C7—C14—O4 | −25.5 (2) |
C2—C1—C6—C7 | −179.08 (12) | C6—C7—C14—O4 | 151.15 (16) |
C5—C6—C7—C8 | 178.79 (12) | C8—C7—C14—O5 | 153.84 (12) |
C1—C6—C7—C8 | 0.57 (18) | C6—C7—C14—O5 | −29.51 (19) |
C5—C6—C7—C14 | 2.3 (2) | C14—O5—C15—C16 | 72.46 (16) |
C1—C6—C7—C14 | −175.94 (12) | C17—O7—C16—O6 | −1.3 (2) |
C6—C7—C8—C9 | −0.84 (19) | C17—O7—C16—C15 | −178.99 (13) |
C14—C7—C8—C9 | 175.99 (11) | O5—C15—C16—O6 | 9.4 (2) |
C1—N1—C9—O1 | −179.05 (11) | O5—C15—C16—O7 | −172.89 (12) |
C1—N1—C9—C8 | 1.65 (19) | C16—O7—C17—C18 | 151.56 (14) |
C10—O1—C9—N1 | −4.16 (17) |
Cg2 is the centroid of the C1–C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O5 | 0.977 (19) | 2.244 (17) | 2.8681 (17) | 120.7 (14) |
C10—H10A···O2i | 0.954 (19) | 2.435 (19) | 3.3079 (16) | 152.1 (15) |
C10—H10B···Cg2i | 0.983 (17) | 3.249 (16) | 4.0173 (14) | 136.3 (15) |
Symmetry code: (i) x+1, y, z. |
Funding information
The support of NSF–MRI Grant No. 1228232 for the purchase of the diffractometer and Tulane University for support of the Tulane Crystallography Laboratory are gratefully acknowledged.
References
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