organic compounds
2,2′-Disulfanediylbis(pyridine N-oxide)–hydrogen peroxide (1/1)
aGeorgia Southern University, 11935 Abercorn Street, Savannah, GA 31419, USA
*Correspondence e-mail: wlynch@georgiasouthern.edu
In the title 10H8N2O2S2·H2O2, both molecules are generated by crystallographic twofold symmetry; the dihedral angle between the pyridine rings is 101.16 (9)°. In the crystal, the components are linked by O—H⋯O hydrogen bonds to generate [010] chains of alternating 2,2′-dithiobis(pyridine N-oxide) and hydrogen peroxide molecules. The structure was refined as a two-component inversion twin.
CKeywords: crystal structure; 2,2′-dithiobis(pyridine N-oxide); hydrogen peroxide; hydrogen bonding; co-crystal.
CCDC reference: 1825502
Structure description
The antifungal and antibacterial properties of the bispyrithione family have made the compound 2,2′-dithiobis(pyridine N-oxide) of interest for many years (O'Donnell et al., 2009; Paulus, 1993; Zhang et al., 2001). A number of reports on the improved synthesis of the dithiobis compound have also been reported (e.g. Li et al., 2012).
The title compound, C10H8N2O2S2.H2O2, is a (Fig. 1) formed via a hydrogen-bonding network interlinking the dithiobis(pyridine N-oxide) molecules with a C22(12) assembly. The hydrogen bond is formed between the peroxide OH moiety and the pyridine N-oxide O atom with O⋯O = 2.672 (3) Å (Table 1). The hydrogen bonding network generates [010] chains (Fig. 2) of alternating dithiobis(pyridine N-oxide) and hydrogen peroxide molecules. The O2—O2ii and S1—S1i bond distances are 1.454 (4) and 2.067 (2) Å, respectively [symmetry codes: (i) 1 – x, –y, z; (ii) 1–x, 1 – y, z]. Both the hydrogen peroxide and the disulfide molecules are generated by crystallographic twofold symmetry. The torsion angle between the pyridine N-oxide rings is slightly greater than perpendicular at 101.16 (9)°. The torsion angle C1—S1—S1i—C1i that bridges the pyridine rings is slighly less at 100.43 (13)°.
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The hydrogen peroxide H2A—O2—O2ii—H2Aii torsion angle is equal to 133.86 (7)°. Similar compounds have been observed to have this torsion angle much closer to 90°. For example the hydrogen peroxide torsion angle in the (Z)-N-benzylidene-1-phenyl-methanamine oxide solvate is reported to be 88° (Churakov et al., 2017) while a piperizine N-oxide derivative (Ravikumar et al., 2005) is found to be 90°. Similar torsion angles of 101° and lower have been observed in phosphine oxide hydrogen peroxide adducts (see for example Ahn et al., 2015). This large angle can be attributed to the lowest energy confirmation imposed by the solid-state supramolecular structure where the O1⋯O2—O2ii⋯O1ii pseudo torsion angle (via the hydrogen bonds) is 140.06 (6)°.
Synthesis and crystallization
The title compound was synthesized by modification of the literature procedure (Bernstein & Losee, 1956): 2.0 g of 2-pyridinethiol-N-oxide was dissolved in 15 ml of water. To this was slowly added 1.9 ml of 30% hydrogen peroxide. The reaction mixture was stirred for 1 h and a white solid was collected by filtration. The white solid was determined to be 2,2′-dithiobis(pyridine N-oxide) as confirmed by 1H NMR and melting point. The filtrate was allowed to stand for 4 days, at which time colorless prisms of the title compound were collected in a yield of 12%.
Refinement
Crystal data, data collection, and structure . The structure was refined with inversion as the indicated racemic twinning.
details are summarized in Table 2Structural data
CCDC reference: 1825502
https://doi.org/10.1107/S2414314618003206/hb4208sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314618003206/hb4208Isup3.hkl
Data collection: CrystalClear (Rigaku, 2009); cell
CrystalClear (Rigaku, 2009); data reduction: CrystalClear (Rigaku, 2009); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL (Sheldrick, 2015b); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).C10H8N2O2S2·H2O2 | Dx = 1.566 Mg m−3 |
Mr = 286.32 | Mo Kα radiation, λ = 0.71075 Å |
Orthorhombic, P21212 | Cell parameters from 1941 reflections |
a = 11.232 (2) Å | θ = 2.5–27.5° |
b = 12.283 (3) Å | µ = 0.45 mm−1 |
c = 4.401 (1) Å | T = 173 K |
V = 607.2 (2) Å3 | Prism, colorless |
Z = 2 | 0.60 × 0.10 × 0.10 mm |
F(000) = 296 |
Rigaku XtaLAB mini CCD diffractometer | 1386 independent reflections |
Radiation source: Sealed Tube | 1316 reflections with I > 2σ(I) |
Graphite Monochromator monochromator | Rint = 0.045 |
Detector resolution: 13.6612 pixels mm-1 | θmax = 27.4°, θmin = 2.5° |
profile data from ω–scans | h = −14→14 |
Absorption correction: multi-scan (REQAB; Rigaku, 1998) | k = −15→15 |
Tmin = 0.890, Tmax = 1.000 | l = −5→5 |
6396 measured reflections |
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.024 | w = 1/[σ2(Fo2) + (0.025P)2 + 0.1P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.059 | (Δ/σ)max < 0.001 |
S = 1.05 | Δρmax = 0.13 e Å−3 |
1386 reflections | Δρmin = −0.18 e Å−3 |
87 parameters | Absolute structure: Refined as an inversion twin |
0 restraints | Absolute structure parameter: 0.36 (10) |
Primary atom site location: structure-invariant direct methods |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refined as a two-component inversion twin. Carbon-bound H-atoms were placed in calculated positions (C—H = 0.95 Å) and were included in the refinement in the riding model approximation,with Uiso(H) set to 1.2Uequiv(C). |
x | y | z | Uiso*/Ueq | ||
S1 | 0.53255 (4) | 0.07871 (4) | 0.37729 (11) | 0.02740 (14) | |
O1 | 0.56020 (13) | 0.28267 (12) | 0.5366 (4) | 0.0341 (4) | |
N1 | 0.46320 (15) | 0.24721 (13) | 0.6798 (4) | 0.0262 (4) | |
C1 | 0.43106 (16) | 0.14203 (15) | 0.6311 (5) | 0.0238 (4) | |
C2 | 0.32900 (17) | 0.10057 (17) | 0.7678 (5) | 0.0285 (4) | |
H2 | 0.305069 | 0.029391 | 0.729631 | 0.034* | |
C3 | 0.2635 (2) | 0.16604 (18) | 0.9608 (5) | 0.0331 (5) | |
H3 | 0.195453 | 0.139037 | 1.054822 | 0.040* | |
C4 | 0.2999 (2) | 0.27245 (19) | 1.0134 (5) | 0.0352 (5) | |
H4 | 0.256619 | 0.316832 | 1.144195 | 0.042* | |
C5 | 0.40004 (19) | 0.31208 (17) | 0.8720 (6) | 0.0341 (5) | |
H5 | 0.424655 | 0.383244 | 0.907584 | 0.041* | |
O2 | 0.56329 (15) | 0.48760 (13) | 0.3328 (5) | 0.0470 (5) | |
H2A | 0.559 (3) | 0.417 (2) | 0.416 (6) | 0.067 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0285 (2) | 0.0256 (2) | 0.0281 (2) | 0.00163 (19) | 0.0033 (2) | 0.0034 (2) |
O1 | 0.0291 (8) | 0.0270 (8) | 0.0460 (9) | −0.0033 (6) | 0.0009 (7) | 0.0068 (7) |
N1 | 0.0260 (8) | 0.0239 (8) | 0.0286 (8) | 0.0002 (7) | −0.0048 (7) | 0.0020 (7) |
C1 | 0.0246 (9) | 0.0228 (9) | 0.0241 (9) | 0.0013 (7) | −0.0048 (8) | 0.0020 (8) |
C2 | 0.0276 (10) | 0.0289 (10) | 0.0290 (10) | −0.0025 (8) | −0.0022 (8) | −0.0004 (9) |
C3 | 0.0279 (10) | 0.0403 (13) | 0.0310 (12) | 0.0019 (9) | 0.0013 (9) | 0.0000 (9) |
C4 | 0.0366 (12) | 0.0379 (13) | 0.0312 (11) | 0.0110 (10) | −0.0020 (9) | −0.0083 (10) |
C5 | 0.0401 (11) | 0.0253 (10) | 0.0369 (11) | 0.0033 (8) | −0.0075 (11) | −0.0054 (10) |
O2 | 0.0433 (9) | 0.0287 (9) | 0.0688 (11) | 0.0072 (7) | 0.0155 (9) | 0.0110 (9) |
S1—C1 | 1.775 (2) | C3—C4 | 1.389 (4) |
S1—S1i | 2.067 (2) | C3—H3 | 0.9300 |
O1—N1 | 1.332 (2) | C4—C5 | 1.374 (3) |
N1—C1 | 1.358 (3) | C4—H4 | 0.9300 |
N1—C5 | 1.362 (3) | C5—H5 | 0.9300 |
C1—C2 | 1.391 (3) | O2—O2ii | 1.454 (4) |
C2—C3 | 1.382 (3) | O2—H2A | 0.95 (3) |
C2—H2 | 0.9300 | ||
C1—S1—S1i | 100.52 (9) | C2—C3—C4 | 119.5 (2) |
O1—N1—C1 | 117.00 (16) | C2—C3—H3 | 120.2 |
O1—N1—C5 | 121.92 (17) | C4—C3—H3 | 120.2 |
C1—N1—C5 | 121.07 (19) | C5—C4—C3 | 119.9 (2) |
N1—C1—C2 | 119.93 (18) | C5—C4—H4 | 120.0 |
N1—C1—S1 | 110.19 (15) | C3—C4—H4 | 120.0 |
C2—C1—S1 | 129.85 (16) | N1—C5—C4 | 120.0 (2) |
C3—C2—C1 | 119.5 (2) | N1—C5—H5 | 120.0 |
C3—C2—H2 | 120.3 | C4—C5—H5 | 120.0 |
C1—C2—H2 | 120.3 | O2ii—O2—H2A | 98.1 (18) |
Symmetry codes: (i) −x+1, −y, z; (ii) −x+1, −y+1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2A···O1 | 0.95 (3) | 1.73 (3) | 2.672 (3) | 174 (3) |
Funding information
The authors acknowledge financial support from Armstrong State University.
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