organic compounds
2-Amino-1-methyl-4-oxo-4,5-dihydro-1H-imidazol-3-ium 3-carboxy-4-hydroxybenzenesulfonate monohydrate
aDepartment of Physics, Arul Anandar College, Madurai 625 514, India, bDepartment of Physics, Presidency College, Chennai 600 005, India, and cDepartment of Physics, CPCL Polytechnic College, Chennai 600 068, India
*Correspondence e-mail: mohan66@hotmail.com, chakkaravarthi_2005@yahoo.com
The 4H7N3O+·C7H5O6S−·H2O, contains a 5-sulfosalicylate anion, a creatininium cation and a water molecule of crystallization. The cation is protonated at the imidazole N atom and the anion is deprotonated at the sulfonic acid group. The creatininium is disordered over two sets of sites with refined site occupancies of 0.771 (3) and 0.229 (3). The benzene ring is approximately orthogonal to the disordered five-membered rings [dihedral angles of 89.7 (2) and 88.3 (8)° for the major and minor occupancy components, respectively]. In the crystal, the ions are connected through pairs of N—H⋯O hydrogen bonds, generating an R22(8) ring-motif. An intraionic O—H⋯O hydrogen bond generates an S(6) graph-set motif. Weak C—H⋯O contacts link the ions and water molecule into a two-dimensional network parallel to (001). The structure was refined as a two-component twin.
of the title molecular salt, CKeywords: molecular salt; crystal structure; hydrogen bonding.
CCDC reference: 1583586
Structure description
Creatine is extracted from several kinds of muscle and it is endogenously synthesized by the liver and pancreas in humans (Greenhaff et al., 1993; Walker, 1979). We report herein the synthesis and the of the title molecular salt (Fig. 1). Its geometric parameters agree well with those of reported similar structures (Thayanithi et al., 2016; Jahubar Ali et al., 2011).
The title compound contains a disordered creatininium cation,, with site occupancies of 0.771 (3) for the major component (C2A/N1A/C5A/N4A/C3A/O6A) and 0.229 (3) for minor component (C2B/N1B/C5B/N4B/C3B/O6B), a 5-sulfosalicylate anion and a water molecule in the The cation is protonated at the imidizole N atom and the anion is deprotonated at the sulfonic acid group. The benzene ring (C1–C6) is orthogonal to the major [dihedral angle of 89.7 (2)°] and minor [dihedral angle of 88.3 (8)°] components of the five-membered rings. In the an intraionic O—H⋯O hydrogen bond generates an S(6) graph-set motif (Fig. 2).
In the crystal, an N—H⋯O hydrogen bond (Table 1) links the anions and cations, generating an R22(8) ring-motif (Fig. 2). The water molecule links adjacent anions through O—H⋯O hydrogen bonds (Table 1 and Fig. 3). Weak C—H⋯O contacts (Fig. 3 and Table 1) link the components into a two-dimensional network parallel to (001).
Synthesis and crystallization
The title compound was synthesized from the raw materials creatinine and 5-sulfosalicylic acid which were taken in a stoichiometric ratio and dissolved in water at ambient temperature. The solution was stirred for continuously six h to obtain a transparent homogeneous solution. The solution was filtered using Whatmann filter paper and the beaker containing the solution was covered with a perforated polythene cover. The saturated homogeneous solution was allowed to evaporate, yielding good quality crystals suitable for X-ray diffraction after three weeks.
Refinement
Crystal data, data collection and structure . The structure was refined as two-component twin with 0 0 0 0 0 0 1. The creatinium cation is disordered over two orientations with site occupancies of 0.771 (3) and 0.229 (3). The EADP restraint in SHELXL (Sheldrick, 2015) was applied for the disordered atoms.
details are summarized in Table 2
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Structural data
CCDC reference: 1583586
https://doi.org/10.1107/S2414314617015954/lh4027sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314617015954/lh4027Isup2.hkl
Supporting information file. DOI: https://doi.org/10.1107/S2414314617015954/lh4027Isup3.cml
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXT2016 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2016 (Sheldrick, 2015b); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL2016 (Sheldrick, 2015b) and PLATON (Spek, 2009).C4H7N3O+·C7H5O6S−·H2O | F(000) = 724 |
Mr = 348.31 | Dx = 1.569 Mg m−3 |
Monoclinic, P21/c | Cu Kα radiation, λ = 1.54178 Å |
a = 7.2459 (2) Å | Cell parameters from 9845 reflections |
b = 15.5638 (4) Å | θ = 2.2–36.3° |
c = 13.0774 (3) Å | µ = 2.42 mm−1 |
β = 90.100 (1)° | T = 295 K |
V = 1474.79 (7) Å3 | Block, colourless |
Z = 4 | 0.15 × 0.15 × 0.10 mm |
Bruker APEXII CCD diffractometer | 2798 reflections with I > 2σ(I) |
ω and φ scans | Rint = 0.041 |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | θmax = 72.9°, θmin = 2.8° |
Tmin = 0.587, Tmax = 0.754 | h = −7→8 |
22225 measured reflections | k = −19→19 |
2905 independent reflections | l = −15→16 |
Refinement on F2 | 2 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.049 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.129 | w = 1/[σ2(Fo2) + (0.054P)2 + 1.5916P] where P = (Fo2 + 2Fc2)/3 |
S = 1.09 | (Δ/σ)max < 0.001 |
2905 reflections | Δρmax = 0.38 e Å−3 |
245 parameters | Δρmin = −0.31 e Å−3 |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refined as a 2-component twin. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
S1 | 0.76216 (13) | 0.74331 (4) | 0.63421 (5) | 0.0308 (2) | |
O2 | 1.2464 (5) | 0.77212 (16) | 0.70783 (19) | 0.0483 (6) | |
O3 | 0.9162 (4) | 0.79601 (15) | 0.6001 (3) | 0.0434 (7) | |
O4 | 0.7878 (6) | 0.71354 (15) | 0.73693 (17) | 0.0672 (11) | |
O5 | 0.5909 (4) | 0.78905 (16) | 0.6167 (3) | 0.0525 (8) | |
O6 | 0.7490 (6) | 0.44174 (15) | 0.36304 (17) | 0.0575 (7) | |
H6A | 0.750112 | 0.396763 | 0.395694 | 0.086* | |
O7 | 0.7467 (5) | 0.34602 (13) | 0.52820 (18) | 0.0512 (6) | |
O8 | 0.7550 (6) | 0.41124 (13) | 0.67992 (17) | 0.0506 (6) | |
H8 | 0.772633 | 0.362118 | 0.700399 | 0.076* | |
C1 | 0.7584 (5) | 0.65219 (16) | 0.55462 (19) | 0.0269 (5) | |
C2 | 0.7543 (5) | 0.57105 (16) | 0.59708 (19) | 0.0288 (5) | |
H2 | 0.754383 | 0.564915 | 0.667819 | 0.035* | |
C3 | 0.7500 (5) | 0.49812 (16) | 0.5351 (2) | 0.0303 (6) | |
C4 | 0.7492 (7) | 0.50885 (19) | 0.4280 (2) | 0.0369 (6) | |
C5 | 0.7545 (6) | 0.5911 (2) | 0.3871 (2) | 0.0407 (7) | |
H5 | 0.757849 | 0.597882 | 0.316487 | 0.049* | |
C6 | 0.7550 (6) | 0.66220 (18) | 0.4484 (2) | 0.0357 (6) | |
H6 | 0.752994 | 0.716846 | 0.419590 | 0.043* | |
C7 | 0.7485 (7) | 0.41139 (18) | 0.5798 (2) | 0.0363 (6) | |
N1A | 1.1347 (5) | 1.0238 (3) | 0.3774 (3) | 0.0284 (7) | 0.771 (3) |
H1A | 1.111783 | 1.077990 | 0.375202 | 0.034* | 0.771 (3) |
C2A | 1.0054 (5) | 0.9613 (3) | 0.3817 (4) | 0.0302 (7) | 0.771 (3) |
C3A | 1.1079 (7) | 0.8776 (3) | 0.3811 (4) | 0.0314 (8) | 0.771 (3) |
H3A | 1.059443 | 0.822297 | 0.379979 | 0.038* | 0.771 (3) |
N4A | 1.3000 (7) | 0.9033 (2) | 0.3826 (3) | 0.0235 (7) | 0.771 (3) |
C5A | 1.3095 (7) | 0.9879 (3) | 0.3770 (4) | 0.0257 (8) | 0.771 (3) |
O6A | 0.8414 (4) | 0.9749 (2) | 0.3856 (3) | 0.0454 (7) | 0.771 (3) |
C6A | 1.4533 (7) | 0.8455 (3) | 0.3792 (6) | 0.0456 (14) | 0.771 (3) |
H6AA | 1.409585 | 0.787429 | 0.384815 | 0.068* | 0.771 (3) |
H6AB | 1.517571 | 0.852489 | 0.315673 | 0.068* | 0.771 (3) |
H6AC | 1.535550 | 0.857697 | 0.434992 | 0.068* | 0.771 (3) |
N8A | 1.4596 (6) | 1.0336 (2) | 0.3736 (4) | 0.0362 (8) | 0.771 (3) |
H8AA | 1.565543 | 1.008656 | 0.374992 | 0.043* | 0.771 (3) |
H8AB | 1.452993 | 1.088636 | 0.369915 | 0.043* | 0.771 (3) |
N1B | 1.359 (2) | 1.0233 (11) | 0.3762 (13) | 0.0284 (7) | 0.229 (3) |
H1B | 1.378647 | 1.077807 | 0.373429 | 0.034* | 0.229 (3) |
C2B | 1.5042 (18) | 0.9616 (9) | 0.3808 (14) | 0.0302 (7) | 0.229 (3) |
C3B | 1.399 (3) | 0.8786 (14) | 0.3735 (15) | 0.0314 (8) | 0.229 (3) |
H3B | 1.447922 | 0.823430 | 0.370289 | 0.038* | 0.229 (3) |
N4B | 1.210 (3) | 0.9018 (9) | 0.3724 (13) | 0.0235 (7) | 0.229 (3) |
C5B | 1.194 (3) | 0.9897 (11) | 0.3766 (14) | 0.0257 (8) | 0.229 (3) |
O6B | 1.6597 (13) | 0.9739 (8) | 0.3906 (12) | 0.0454 (7) | 0.229 (3) |
C6B | 1.059 (3) | 0.8509 (12) | 0.358 (2) | 0.0456 (14) | 0.229 (3) |
H6BA | 1.095917 | 0.791695 | 0.356864 | 0.068* | 0.229 (3) |
H6BB | 0.972351 | 0.860018 | 0.412162 | 0.068* | 0.229 (3) |
H6BC | 1.001645 | 0.865178 | 0.293577 | 0.068* | 0.229 (3) |
N8B | 1.025 (2) | 1.0332 (8) | 0.3690 (14) | 0.0362 (8) | 0.229 (3) |
H8BA | 1.023308 | 1.088293 | 0.363335 | 0.043* | 0.229 (3) |
H8BB | 0.923017 | 1.004941 | 0.369984 | 0.043* | 0.229 (3) |
H2A | 1.340 (4) | 0.768 (3) | 0.672 (3) | 0.054* | |
H2B | 1.191 (5) | 0.789 (3) | 0.657 (2) | 0.054* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0428 (4) | 0.0216 (3) | 0.0280 (3) | 0.0009 (4) | 0.0022 (5) | −0.0013 (2) |
O2 | 0.0439 (15) | 0.0468 (12) | 0.0543 (14) | 0.0027 (15) | −0.0050 (17) | −0.0055 (11) |
O3 | 0.0402 (15) | 0.0318 (12) | 0.0583 (18) | −0.0089 (10) | 0.0060 (12) | −0.0053 (12) |
O4 | 0.142 (3) | 0.0337 (12) | 0.0260 (11) | −0.0063 (18) | −0.0006 (18) | −0.0024 (9) |
O5 | 0.0366 (14) | 0.0385 (13) | 0.082 (2) | 0.0052 (10) | 0.0110 (16) | −0.0179 (16) |
O6 | 0.090 (2) | 0.0438 (12) | 0.0386 (12) | −0.0018 (18) | −0.007 (2) | −0.0200 (9) |
O7 | 0.0671 (17) | 0.0275 (10) | 0.0591 (13) | −0.0055 (14) | 0.0019 (18) | −0.0112 (9) |
O8 | 0.0783 (19) | 0.0285 (10) | 0.0449 (12) | −0.0075 (17) | −0.013 (2) | 0.0040 (9) |
C1 | 0.0286 (14) | 0.0273 (12) | 0.0247 (11) | 0.0052 (15) | −0.0008 (15) | −0.0021 (9) |
C2 | 0.0339 (15) | 0.0275 (12) | 0.0248 (11) | −0.0037 (15) | 0.0047 (16) | −0.0015 (9) |
C3 | 0.0307 (15) | 0.0262 (12) | 0.0341 (13) | −0.0005 (15) | −0.0032 (17) | −0.0051 (10) |
C4 | 0.0410 (17) | 0.0368 (14) | 0.0329 (13) | −0.0015 (18) | 0.0039 (18) | −0.0137 (11) |
C5 | 0.0520 (19) | 0.0461 (16) | 0.0239 (12) | −0.0007 (19) | 0.002 (2) | −0.0032 (11) |
C6 | 0.0460 (18) | 0.0325 (14) | 0.0285 (12) | −0.0022 (18) | −0.0018 (18) | 0.0041 (10) |
C7 | 0.0371 (16) | 0.0292 (13) | 0.0424 (14) | 0.003 (2) | −0.0048 (19) | −0.0046 (11) |
N1A | 0.021 (2) | 0.0292 (17) | 0.0350 (17) | 0.0047 (14) | 0.0027 (18) | 0.0010 (14) |
C2A | 0.0217 (17) | 0.0411 (19) | 0.0278 (16) | 0.0029 (16) | 0.0037 (18) | −0.0009 (14) |
C3A | 0.022 (2) | 0.039 (2) | 0.033 (2) | −0.0025 (19) | 0.001 (2) | −0.0029 (17) |
N4A | 0.015 (2) | 0.0257 (12) | 0.0300 (16) | −0.0022 (17) | −0.0043 (18) | −0.0005 (11) |
C5A | 0.026 (2) | 0.0278 (18) | 0.0236 (15) | 0.0034 (18) | 0.003 (2) | 0.0022 (14) |
O6A | 0.0203 (14) | 0.0618 (18) | 0.0543 (17) | 0.0007 (14) | 0.0050 (16) | 0.0023 (14) |
C6A | 0.029 (2) | 0.029 (2) | 0.079 (4) | 0.0078 (19) | −0.007 (3) | −0.008 (2) |
N8A | 0.0251 (19) | 0.0283 (15) | 0.055 (2) | 0.0015 (14) | 0.001 (2) | 0.0031 (15) |
N1B | 0.021 (2) | 0.0292 (17) | 0.0350 (17) | 0.0047 (14) | 0.0027 (18) | 0.0010 (14) |
C2B | 0.0217 (17) | 0.0411 (19) | 0.0278 (16) | 0.0029 (16) | 0.0037 (18) | −0.0009 (14) |
C3B | 0.022 (2) | 0.039 (2) | 0.033 (2) | −0.0025 (19) | 0.001 (2) | −0.0029 (17) |
N4B | 0.015 (2) | 0.0257 (12) | 0.0300 (16) | −0.0022 (17) | −0.0043 (18) | −0.0005 (11) |
C5B | 0.026 (2) | 0.0278 (18) | 0.0236 (15) | 0.0034 (18) | 0.003 (2) | 0.0022 (14) |
O6B | 0.0203 (14) | 0.0618 (18) | 0.0543 (17) | 0.0007 (14) | 0.0050 (16) | 0.0023 (14) |
C6B | 0.029 (2) | 0.029 (2) | 0.079 (4) | 0.0078 (19) | −0.007 (3) | −0.008 (2) |
N8B | 0.0251 (19) | 0.0283 (15) | 0.055 (2) | 0.0015 (14) | 0.001 (2) | 0.0031 (15) |
S1—O4 | 1.433 (2) | C3A—N4A | 1.448 (6) |
S1—O5 | 1.448 (3) | C3A—H3A | 0.9300 |
S1—O3 | 1.456 (3) | N4A—C5A | 1.321 (6) |
S1—C1 | 1.759 (3) | N4A—C6A | 1.430 (6) |
O2—H2A | 0.824 (10) | C5A—N8A | 1.300 (7) |
O2—H2B | 0.819 (10) | C6A—H6AA | 0.9600 |
O6—C4 | 1.347 (3) | C6A—H6AB | 0.9600 |
O6—H6A | 0.8200 | C6A—H6AC | 0.9600 |
O7—C7 | 1.221 (4) | N8A—H8AA | 0.8600 |
O8—C7 | 1.310 (4) | N8A—H8AB | 0.8600 |
O8—H8 | 0.8200 | N1B—C5B | 1.31 (3) |
C1—C2 | 1.380 (3) | N1B—C2B | 1.42 (2) |
C1—C6 | 1.399 (3) | N1B—H1B | 0.8600 |
C2—C3 | 1.395 (3) | C2B—O6B | 1.150 (17) |
C2—H2 | 0.9300 | C2B—C3B | 1.50 (2) |
C3—C4 | 1.411 (4) | C3B—N4B | 1.42 (2) |
C3—C7 | 1.471 (4) | C3B—H3B | 0.9300 |
C4—C5 | 1.387 (4) | N4B—C6B | 1.36 (2) |
C5—C6 | 1.367 (4) | N4B—C5B | 1.37 (2) |
C5—H5 | 0.9300 | C5B—N8B | 1.40 (2) |
C6—H6 | 0.9300 | C6B—H6BA | 0.9600 |
N1A—C2A | 1.351 (6) | C6B—H6BB | 0.9600 |
N1A—C5A | 1.384 (6) | C6B—H6BC | 0.9600 |
N1A—H1A | 0.8600 | N8B—H8BA | 0.8600 |
C2A—O6A | 1.208 (5) | N8B—H8BB | 0.8600 |
C2A—C3A | 1.499 (6) | ||
O4—S1—O5 | 114.6 (2) | C5A—N4A—C6A | 125.8 (5) |
O4—S1—O3 | 111.8 (2) | C5A—N4A—C3A | 108.9 (5) |
O5—S1—O3 | 109.37 (15) | C6A—N4A—C3A | 125.0 (4) |
O4—S1—C1 | 107.21 (13) | N8A—C5A—N4A | 126.2 (5) |
O5—S1—C1 | 106.87 (18) | N8A—C5A—N1A | 123.0 (4) |
O3—S1—C1 | 106.50 (16) | N4A—C5A—N1A | 110.8 (5) |
H2A—O2—H2B | 88 (4) | N4A—C6A—H6AA | 109.5 |
C4—O6—H6A | 109.5 | N4A—C6A—H6AB | 109.5 |
C7—O8—H8 | 109.5 | H6AA—C6A—H6AB | 109.5 |
C2—C1—C6 | 120.1 (2) | N4A—C6A—H6AC | 109.5 |
C2—C1—S1 | 120.00 (19) | H6AA—C6A—H6AC | 109.5 |
C6—C1—S1 | 119.9 (2) | H6AB—C6A—H6AC | 109.5 |
C1—C2—C3 | 120.8 (2) | C5A—N8A—H8AA | 120.0 |
C1—C2—H2 | 119.6 | C5A—N8A—H8AB | 120.0 |
C3—C2—H2 | 119.6 | H8AA—N8A—H8AB | 120.0 |
C2—C3—C4 | 118.7 (2) | C5B—N1B—C2B | 113.9 (17) |
C2—C3—C7 | 121.1 (2) | C5B—N1B—H1B | 123.0 |
C4—C3—C7 | 120.2 (2) | C2B—N1B—H1B | 123.0 |
O6—C4—C5 | 118.1 (3) | O6B—C2B—N1B | 128.0 (16) |
O6—C4—C3 | 122.3 (3) | O6B—C2B—C3B | 130.3 (17) |
C5—C4—C3 | 119.5 (2) | N1B—C2B—C3B | 101.7 (15) |
C6—C5—C4 | 121.4 (3) | N4B—C3B—C2B | 105.8 (19) |
C6—C5—H5 | 119.3 | N4B—C3B—H3B | 127.1 |
C4—C5—H5 | 119.3 | C2B—C3B—H3B | 127.1 |
C5—C6—C1 | 119.5 (3) | C6B—N4B—C5B | 121.0 (18) |
C5—C6—H6 | 120.3 | C6B—N4B—C3B | 129.0 (15) |
C1—C6—H6 | 120.3 | C5B—N4B—C3B | 109.6 (19) |
O7—C7—O8 | 123.4 (3) | N1B—C5B—N4B | 109 (2) |
O7—C7—C3 | 123.1 (3) | N1B—C5B—N8B | 127.2 (15) |
O8—C7—C3 | 113.5 (2) | N4B—C5B—N8B | 123.6 (17) |
C2A—N1A—C5A | 110.1 (5) | N4B—C6B—H6BA | 109.5 |
C2A—N1A—H1A | 124.9 | N4B—C6B—H6BB | 109.5 |
C5A—N1A—H1A | 124.9 | H6BA—C6B—H6BB | 109.5 |
O6A—C2A—N1A | 123.9 (4) | N4B—C6B—H6BC | 109.5 |
O6A—C2A—C3A | 129.7 (4) | H6BA—C6B—H6BC | 109.5 |
N1A—C2A—C3A | 106.4 (4) | H6BB—C6B—H6BC | 109.5 |
N4A—C3A—C2A | 103.7 (4) | C5B—N8B—H8BA | 120.0 |
N4A—C3A—H3A | 128.2 | C5B—N8B—H8BB | 120.0 |
C2A—C3A—H3A | 128.2 | H8BA—N8B—H8BB | 120.0 |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2B···O3 | 0.82 (1) | 2.13 (3) | 2.799 (4) | 139 (4) |
O6—H6A···O7 | 0.82 | 1.90 | 2.624 (3) | 146 |
N1A—H1A···O3i | 0.86 | 2.00 | 2.844 (5) | 168 |
O2—H2A···O5ii | 0.82 (1) | 1.99 (2) | 2.780 (4) | 161 (5) |
N8A—H8AA···O6Aii | 0.86 | 2.07 | 2.917 (5) | 168 |
N8A—H8AB···O5i | 0.86 | 1.94 | 2.788 (4) | 170 |
O8—H8···O2iii | 0.82 | 1.85 | 2.616 (3) | 155 |
C6A—H6AB···O4iv | 0.96 | 2.44 | 3.194 (7) | 135 |
Symmetry codes: (i) −x+2, −y+2, −z+1; (ii) x+1, y, z; (iii) −x+2, y−1/2, −z+3/2; (iv) x+1, −y+3/2, z−1/2. |
Acknowledgements
The authors acknowledge the SAIF, IIT, Madras for the data collection.
References
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