organic compounds
5-[(4-Bromobenzyl)oxy]-4-(4-methylbenzenesulfonyl)-1,3-thiazole
aDepartment of Studies in Chemistry, Manasagangotri, University of Mysore, Mysore 570 006, India, bDepartment of Physics, The National Institutional of Engineering (NIE), Mysore 570 008, India, and cDepartment of Physics, RV College of Engineering, Bengaluru 560 059, India
*Correspondence e-mail: mpsadashiva@gmail.com
In the title compound, C17H14BrNO3S2, the mean plane of the thiazole ring subtends dihedral angles of 3.6 (2) and 79.9 (2)° with the bromobenzyl and toluyl rings, respectively. In the crystal, short S⋯O contacts [3.012 (3) Å] and aromatic π–π stacking between the thiazole and toluyl rings [centroid–centroid separation = 3.687 (2) Å] are observed.
CCDC reference: 1543222
Structure description
Thiazoles have many applications in the field of medicinal chemistry, for instance as anti-microbial (Liaras et al., 2011), anti-cancer (Romagnoli et al., 2012) and anti-mycobacterium tuberculosis (Shiradkar et al., 2007) agents. As part of our studies of these compounds, we have synthesized the title compound to study its crystal structure.
In the molecular structure (Fig. 1), the mean plane of the thiazole moiety (C11/N12/C13/S14/C15), is approximately coplanar with the bromobenzyl ring [dihedral angle = 3.6 (2)°] and close to orthogonal to the toluyl ring [79.9 (2)°]. In the crystal, short S⋯O contacts [3.012 (3) Å] and aromatic π–π stacking between the thiazole and toluyl rings [centroid-centroid separation = 3.687 (2) Å] are observed. A packing diagram is shown in Fig. 2
Synthesis and crystallization
To a suspension of sodium hydride (60% suspension in paraffin; 4 mmol) in DMF (1.5 ml), a mixture of xanthate ester 2 (2 mmol), and active methylene isocyanide 3 (2 mmol) in DMF (1.5 ml) was added dropwise at 0°C. The mixture was allowed to stir at room temperature for 10–20 min (monitored by TLC). After completion of the reaction, the mixture was poured into a
of ammonium chloride (20 ml) and extracted with ethyl acetate (20 ml × 2). The combined ethyl acetate layer was washed with water (20 ml), brine (20 ml), dried over anhydrous sodium sulfate and concentrated under reduced pressure to get crude products, which were purified by using ethyl acetate–hexane as Pale-yellow blocks of the title compound were recrystallized from ethyl acetate solution.Refinement
Crystal data, data collection and structure .
details are summarized in Table 1Structural data
CCDC reference: 1543222
https://doi.org/10.1107/S2414314617015000/hb4172sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: https://doi.org/10.1107/S2414314617015000/hb4172Isup2.hkl
Data collection: APEX2 (Bruker, 2009); cell
SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C17H14BrNO3S2 | Z = 2 |
Mr = 424.31 | F(000) = 428 |
Triclinic, P1 | Dx = 1.632 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.6092 (4) Å | Cell parameters from 3955 reflections |
b = 8.2768 (5) Å | θ = 2.5–27.5° |
c = 13.8718 (8) Å | µ = 2.64 mm−1 |
α = 95.175 (5)° | T = 293 K |
β = 94.559 (5)° | Block, pale yellow |
γ = 94.814 (5)° | 0.28 × 0.25 × 0.22 mm |
V = 863.67 (9) Å3 |
Bruker APEXII CCD diffractometer | Rint = 0.035 |
Detector resolution: 18.4 pixels mm-1 | θmax = 27.5°, θmin = 2.5° |
ω and φ scans | h = −9→9 |
7351 measured reflections | k = −10→8 |
3955 independent reflections | l = −16→18 |
2633 reflections with I > 2σ(I) |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.056 | H-atom parameters constrained |
wR(F2) = 0.144 | w = 1/[Σ2(FO2) + (0.0501P)2 + 0.4404P] where P = (FO2 + 2FC2)/3 |
S = 1.04 | (Δ/σ)max = 0.003 |
3955 reflections | Δρmax = 0.35 e Å−3 |
218 parameters | Δρmin = −0.67 e Å−3 |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > 2sigma(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. The H atoms were positioned geometrically and allowed to ride on their parent atom, with C–H distance in the range of 0.93 to 0.97 Å; Uiso(H) = 1.2–1.5Ueq (carrier atom) for all H atoms. |
x | y | z | Uiso*/Ueq | ||
Br24 | 0.46321 (8) | 0.97111 (7) | 0.79555 (4) | 0.0674 (2) | |
S8 | 0.12112 (14) | 0.52364 (12) | 1.29198 (8) | 0.0382 (3) | |
S14 | −0.39923 (15) | 0.56970 (15) | 1.16549 (9) | 0.0508 (4) | |
O9 | 0.2178 (4) | 0.5355 (4) | 1.2075 (2) | 0.0474 (10) | |
O10 | 0.1418 (4) | 0.3884 (3) | 1.3483 (2) | 0.0516 (11) | |
O16 | −0.0708 (5) | 0.6623 (5) | 1.1124 (3) | 0.0779 (14) | |
N12 | −0.2288 (5) | 0.4619 (4) | 1.3100 (3) | 0.0450 (12) | |
C1 | 0.2819 (7) | 1.1548 (6) | 1.5513 (4) | 0.0647 (19) | |
C2 | 0.2422 (6) | 0.9961 (5) | 1.4872 (3) | 0.0458 (16) | |
C3 | 0.2264 (6) | 0.9965 (5) | 1.3866 (3) | 0.0483 (16) | |
C4 | 0.1911 (6) | 0.8518 (5) | 1.3277 (3) | 0.0445 (16) | |
C5 | 0.1718 (5) | 0.7057 (5) | 1.3686 (3) | 0.0358 (12) | |
C6 | 0.1858 (6) | 0.7040 (5) | 1.4683 (3) | 0.0458 (14) | |
C7 | 0.2221 (7) | 0.8489 (6) | 1.5267 (3) | 0.0539 (16) | |
C11 | −0.1060 (5) | 0.5239 (5) | 1.2538 (3) | 0.0366 (12) | |
C13 | −0.3864 (6) | 0.4786 (6) | 1.2722 (3) | 0.0504 (17) | |
C15 | −0.1693 (6) | 0.5886 (5) | 1.1725 (3) | 0.0438 (14) | |
C17 | −0.1435 (6) | 0.7034 (6) | 1.0217 (3) | 0.0471 (16) | |
C18 | 0.0056 (6) | 0.7718 (5) | 0.9690 (3) | 0.0393 (14) | |
C19 | 0.1812 (6) | 0.7713 (5) | 1.0047 (3) | 0.0449 (14) | |
C20 | 0.3145 (6) | 0.8305 (5) | 0.9536 (3) | 0.0490 (17) | |
C21 | 0.2766 (6) | 0.8919 (5) | 0.8658 (3) | 0.0452 (14) | |
C22 | 0.1037 (7) | 0.8947 (5) | 0.8301 (3) | 0.0496 (16) | |
C23 | −0.0312 (6) | 0.8358 (5) | 0.8813 (3) | 0.0473 (17) | |
H1A | 0.20336 | 1.15773 | 1.60218 | 0.0970* | |
H1B | 0.26522 | 1.24432 | 1.51311 | 0.0970* | |
H1C | 0.40214 | 1.16313 | 1.57933 | 0.0970* | |
H3 | 0.23960 | 1.09451 | 1.35890 | 0.0580* | |
H4 | 0.18030 | 0.85259 | 1.26051 | 0.0540* | |
H6 | 0.17101 | 0.60604 | 1.49586 | 0.0550* | |
H7 | 0.23317 | 0.84745 | 1.59382 | 0.0650* | |
H13 | −0.48714 | 0.44345 | 1.30113 | 0.0610* | |
H16A | −0.22813 | 0.78345 | 1.03150 | 0.0560* | |
H16B | −0.20413 | 0.60745 | 0.98417 | 0.0560* | |
H18 | 0.20832 | 0.73038 | 1.06380 | 0.0540* | |
H19 | 0.43168 | 0.82933 | 0.97807 | 0.0590* | |
H21 | 0.07767 | 0.93653 | 0.77112 | 0.0600* | |
H22 | −0.14821 | 0.83882 | 0.85688 | 0.0570* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br24 | 0.0677 (4) | 0.0740 (4) | 0.0582 (4) | −0.0139 (3) | 0.0067 (3) | 0.0127 (3) |
S8 | 0.0301 (5) | 0.0405 (5) | 0.0433 (6) | 0.0046 (4) | −0.0011 (4) | 0.0023 (5) |
S14 | 0.0309 (6) | 0.0608 (7) | 0.0595 (8) | 0.0038 (5) | −0.0024 (5) | 0.0055 (6) |
O9 | 0.0313 (17) | 0.0651 (19) | 0.0448 (17) | 0.0062 (15) | 0.0058 (13) | −0.0036 (15) |
O10 | 0.051 (2) | 0.0425 (16) | 0.061 (2) | 0.0102 (15) | −0.0057 (16) | 0.0080 (15) |
O16 | 0.038 (2) | 0.134 (3) | 0.065 (2) | −0.007 (2) | −0.0069 (17) | 0.052 (2) |
N12 | 0.037 (2) | 0.051 (2) | 0.047 (2) | 0.0018 (17) | 0.0046 (17) | 0.0055 (17) |
C1 | 0.068 (4) | 0.058 (3) | 0.064 (3) | 0.011 (3) | −0.006 (3) | −0.011 (3) |
C2 | 0.038 (3) | 0.044 (2) | 0.053 (3) | 0.007 (2) | −0.002 (2) | −0.006 (2) |
C3 | 0.058 (3) | 0.038 (2) | 0.049 (3) | 0.001 (2) | 0.003 (2) | 0.009 (2) |
C4 | 0.046 (3) | 0.052 (3) | 0.036 (2) | 0.002 (2) | 0.0059 (19) | 0.008 (2) |
C5 | 0.029 (2) | 0.040 (2) | 0.038 (2) | 0.0019 (17) | −0.0013 (17) | 0.0069 (18) |
C6 | 0.049 (3) | 0.048 (2) | 0.040 (2) | 0.000 (2) | 0.000 (2) | 0.010 (2) |
C7 | 0.065 (3) | 0.061 (3) | 0.034 (2) | 0.005 (3) | −0.005 (2) | 0.004 (2) |
C11 | 0.033 (2) | 0.037 (2) | 0.039 (2) | 0.0032 (18) | 0.0028 (18) | 0.0004 (17) |
C13 | 0.037 (3) | 0.058 (3) | 0.056 (3) | 0.000 (2) | 0.012 (2) | 0.001 (2) |
C15 | 0.034 (2) | 0.048 (2) | 0.048 (3) | −0.002 (2) | 0.001 (2) | 0.004 (2) |
C17 | 0.040 (3) | 0.059 (3) | 0.041 (2) | 0.007 (2) | −0.005 (2) | 0.003 (2) |
C18 | 0.044 (3) | 0.038 (2) | 0.035 (2) | 0.0059 (19) | −0.0009 (18) | 0.0012 (18) |
C19 | 0.045 (3) | 0.050 (2) | 0.038 (2) | 0.001 (2) | −0.004 (2) | 0.005 (2) |
C20 | 0.041 (3) | 0.055 (3) | 0.048 (3) | −0.001 (2) | −0.007 (2) | 0.004 (2) |
C21 | 0.048 (3) | 0.044 (2) | 0.041 (2) | 0.000 (2) | 0.000 (2) | −0.003 (2) |
C22 | 0.059 (3) | 0.050 (2) | 0.039 (3) | 0.005 (2) | −0.005 (2) | 0.008 (2) |
C23 | 0.042 (3) | 0.054 (3) | 0.045 (3) | 0.009 (2) | −0.006 (2) | 0.004 (2) |
Br24—C21 | 1.891 (4) | C18—C19 | 1.388 (6) |
S8—O9 | 1.439 (3) | C18—C23 | 1.388 (6) |
S8—O10 | 1.434 (3) | C19—C20 | 1.366 (6) |
S8—C5 | 1.760 (4) | C20—C21 | 1.380 (6) |
S8—C11 | 1.767 (4) | C21—C22 | 1.371 (7) |
S14—C13 | 1.721 (5) | C22—C23 | 1.375 (7) |
S14—C15 | 1.738 (5) | C1—H1A | 0.9600 |
O16—C15 | 1.320 (6) | C1—H1B | 0.9600 |
O16—C17 | 1.415 (6) | C1—H1C | 0.9600 |
N12—C11 | 1.361 (6) | C3—H3 | 0.9300 |
N12—C13 | 1.294 (6) | C4—H4 | 0.9300 |
C1—C2 | 1.512 (7) | C6—H6 | 0.9300 |
C2—C3 | 1.391 (6) | C7—H7 | 0.9300 |
C2—C7 | 1.382 (6) | C13—H13 | 0.9300 |
C3—C4 | 1.382 (6) | C17—H16A | 0.9700 |
C4—C5 | 1.383 (6) | C17—H16B | 0.9700 |
C5—C6 | 1.380 (6) | C19—H18 | 0.9300 |
C6—C7 | 1.380 (6) | C20—H19 | 0.9300 |
C11—C15 | 1.363 (6) | C22—H21 | 0.9300 |
C17—C18 | 1.497 (6) | C23—H22 | 0.9300 |
O9—S8—O10 | 118.94 (19) | Br24—C21—C22 | 120.5 (3) |
O9—S8—C5 | 108.10 (19) | C20—C21—C22 | 119.7 (4) |
O9—S8—C11 | 107.43 (19) | C21—C22—C23 | 120.1 (4) |
O10—S8—C5 | 108.85 (18) | C18—C23—C22 | 120.6 (4) |
O10—S8—C11 | 108.17 (19) | C2—C1—H1A | 109.00 |
C5—S8—C11 | 104.40 (19) | C2—C1—H1B | 109.00 |
C13—S14—C15 | 88.4 (2) | C2—C1—H1C | 110.00 |
C15—O16—C17 | 121.7 (4) | H1A—C1—H1B | 109.00 |
C11—N12—C13 | 110.0 (4) | H1A—C1—H1C | 109.00 |
C1—C2—C3 | 120.0 (4) | H1B—C1—H1C | 109.00 |
C1—C2—C7 | 121.1 (4) | C2—C3—H3 | 120.00 |
C3—C2—C7 | 118.8 (4) | C4—C3—H3 | 120.00 |
C2—C3—C4 | 120.3 (4) | C3—C4—H4 | 120.00 |
C3—C4—C5 | 120.1 (4) | C5—C4—H4 | 120.00 |
S8—C5—C4 | 119.1 (3) | C5—C6—H6 | 120.00 |
S8—C5—C6 | 120.7 (3) | C7—C6—H6 | 120.00 |
C4—C5—C6 | 120.2 (4) | C2—C7—H7 | 119.00 |
C5—C6—C7 | 119.5 (4) | C6—C7—H7 | 119.00 |
C2—C7—C6 | 121.2 (4) | S14—C13—H13 | 122.00 |
S8—C11—N12 | 119.1 (3) | N12—C13—H13 | 122.00 |
S8—C11—C15 | 124.4 (3) | O16—C17—H16A | 110.00 |
N12—C11—C15 | 116.5 (4) | O16—C17—H16B | 110.00 |
S14—C13—N12 | 116.2 (3) | C18—C17—H16A | 110.00 |
S14—C15—O16 | 125.8 (3) | C18—C17—H16B | 110.00 |
S14—C15—C11 | 109.0 (3) | H16A—C17—H16B | 108.00 |
O16—C15—C11 | 125.1 (4) | C18—C19—H18 | 120.00 |
O16—C17—C18 | 107.8 (4) | C20—C19—H18 | 120.00 |
C17—C18—C19 | 121.8 (4) | C19—C20—H19 | 120.00 |
C17—C18—C23 | 119.6 (4) | C21—C20—H19 | 120.00 |
C19—C18—C23 | 118.6 (4) | C21—C22—H21 | 120.00 |
C18—C19—C20 | 120.5 (4) | C23—C22—H21 | 120.00 |
C19—C20—C21 | 120.5 (4) | C18—C23—H22 | 120.00 |
Br24—C21—C20 | 119.8 (3) | C22—C23—H22 | 120.00 |
O9—S8—C5—C4 | 38.3 (4) | C3—C2—C7—C6 | −0.4 (7) |
O9—S8—C5—C6 | −144.0 (3) | C2—C3—C4—C5 | −0.2 (7) |
O10—S8—C5—C4 | 168.8 (3) | C3—C4—C5—S8 | 178.3 (3) |
O10—S8—C5—C6 | −13.5 (4) | C3—C4—C5—C6 | 0.7 (7) |
C11—S8—C5—C4 | −75.8 (4) | S8—C5—C6—C7 | −178.7 (4) |
C11—S8—C5—C6 | 101.8 (4) | C4—C5—C6—C7 | −1.1 (7) |
O9—S8—C11—N12 | 158.7 (3) | C5—C6—C7—C2 | 1.0 (7) |
O9—S8—C11—C15 | −24.0 (4) | S8—C11—C15—S14 | −177.6 (2) |
O10—S8—C11—N12 | 29.2 (4) | S8—C11—C15—O16 | −1.4 (7) |
O10—S8—C11—C15 | −153.6 (4) | N12—C11—C15—S14 | −0.3 (5) |
C5—S8—C11—N12 | −86.7 (4) | N12—C11—C15—O16 | 176.0 (4) |
C5—S8—C11—C15 | 90.6 (4) | O16—C17—C18—C19 | 6.7 (6) |
C15—S14—C13—N12 | −0.4 (4) | O16—C17—C18—C23 | −174.2 (4) |
C13—S14—C15—O16 | −175.9 (4) | C17—C18—C19—C20 | 178.2 (4) |
C13—S14—C15—C11 | 0.4 (3) | C23—C18—C19—C20 | −1.0 (6) |
C17—O16—C15—S14 | −14.6 (6) | C17—C18—C23—C22 | −178.0 (4) |
C17—O16—C15—C11 | 169.8 (4) | C19—C18—C23—C22 | 1.2 (6) |
C15—O16—C17—C18 | −175.3 (4) | C18—C19—C20—C21 | 0.1 (6) |
C13—N12—C11—S8 | 177.5 (3) | C19—C20—C21—Br24 | −179.3 (3) |
C13—N12—C11—C15 | 0.0 (5) | C19—C20—C21—C22 | 0.6 (6) |
C11—N12—C13—S14 | 0.3 (5) | Br24—C21—C22—C23 | 179.5 (3) |
C1—C2—C3—C4 | 179.7 (4) | C20—C21—C22—C23 | −0.4 (6) |
C7—C2—C3—C4 | 0.0 (7) | C21—C22—C23—C18 | −0.5 (6) |
C1—C2—C7—C6 | 180.0 (5) |
Acknowledgements
NR thanks UGC for providing RGNF and grateful to IOE, University of Mysore for the spectroscopic characterization and MPS thanks UGC-SAP DRS III for financial support. The authors also thank The National Institute of Engineering (NIE), Mysuru, and RV College of Engineering, Bengaluru, for support.
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