forthcoming articles

The following articles are a selection of those recently accepted for publication in IUCr journals.

Journal logoActa Crystallographica Section A
Acta Crystallographica
Section A
FOUNDATIONS AND ADVANCES
Accepted 28 January 2025

Refuting `a new theory for X-ray diffraction' – a reciprocal-space approach

Journal logoActa Crystallographica Section B
Acta Crystallographica
Section B
STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS

Accepted 6 February 2025

Electric charge and salting in/out effects on glucagon's dipole moments and polarizabilities using the GruPol database

This work explores the prediction of glucagon's dipole moments and polarizabilities using the GruPol database, incorporating ionic effects and solvation conditions. The results highlight the influence of high ionic concentrations on the protein's electrical properties, demonstrating good agreement with quantum mechanical benchmarks.

Accepted 4 February 2025

Qu­antitative crystal structure analysis in tri­fluoro­methyl and cyano-substituted N-phenyl­benzamides


Accepted 2 February 2025

Electron density and elastic properties of crystalline [Co(NH3)5NO2]ClNO3: a quantum crystallography study

The intra- and intermolecular atomic interactions in crystalline [Co(NH3)5NO2]ClNO3 and its elastic properties are studied.

Accepted 28 January 2025

Intrusion of quantum crystallography into classical lands

One hundred years after the quantum theory established position and momentum as incompatible quantities, quantum crystallography offers the possibility of an electron phase-space picture in crystals.

Accepted 28 January 2025

A new crystal phase of calcium stannate CaSn2O4(OH)2 and its physico-chemical properties

At 350 °C[623 K], the thermo-vapour treatment of calcium and tin oxides leads to the formation of the previously unknown CaSn2O4(OH)2 phase with lamellar crystals. The synthesised CaSn2O4(OH)2 sample is a stable thermodynamic phase, it has high catalytic activity and selectivity towards C6+ products in the aldol condensation of acetone at 400 °C[673 K].

Accepted 26 January 2025

Computation screening for incorrectly determined cocrystal structures

A method for computational differentiation of salts and cocrystals based on density functional theory is extended. The range of processed structures is extended from 95 to 404 and several problematic structures are recrystallized and redetermined. Our methodology for salt–cocrystal differentiation is improved by using and testing more up to date functionals (rSCAN, r2SCAN). -> [Computational salt–cocrystal differentiation, based on density functional theory improved by up-to-date functionals rSCAN and r2SCAN, has been tested for 404 structures. Several problematic structures have been redetermined.]

Accepted 23 January 2025

Is it possible to obtain a plausible experimental electronic structure without collecting high-order diffraction data?

Experimental electronic structure comparison of the multipole refinement with full dataset and the refinement using the low-order dataset with NospherA2 geometry.

Accepted 23 January 2025

Disorder- and magnetism-driven structural changes in Sm2Mn1–xGa6–yGey

High-resolution single-crystal X-ray diffraction experiments were performed for Sm2Mn1–xGa6–yGey over a wide temperature range (180–430 K). The experiments revealed significant strucural changes that are caused by structural disorder and magnetic ordering.

Accepted 21 January 2025

Structural and magnetic properties of β-Li2IrO3 after grazing-angle focused ion beam thinning

A minimally invasive use of a focused ion beam at grazing incidence can reduce the size of bulk crystals without jeopardizing the structural and electronic order parameters.

Accepted 10 January 2025

Computational analysis tools for magnetic structures in the Bilbao Crystallographic Server

Summary of the tools provided by the Bilbao Crystallographic Server for the analysis and determination of magnetic structures.

more ...
Journal logoActa Crystallographica Section C
Acta Crystallographica
Section C
STRUCTURAL CHEMISTRY

Accepted 6 February 2025

Racemic mimics. Part 1. Nickel coordination com­pounds

There are very few examples of crystallographically well-documented racemic mimics. Therefore, this inter­esting class of crystalline mol­ecules, potentially having useful biological uses, is today one of those scientific orphans largely ignored in the crystallographic realm. Some suggestions are provided for searching for potential cases of such a crystallization mode using information already in print.

Accepted 2 February 2025

Synthesis and characterization of coumarin-derived sulfur analogues using Lawesson's reagent

The synthesis and characterization of six novel coumarin derivatives containing O and S atoms are described. Hirshfeld surface and energy framework analyses show that stacked π–π ring inter­actions occur for all the structures and various hy­dro­gen-bond inter­actions link the stacks to form three-dimensional energy frameworks.
Journal logoActa Crystallographica Section D
Acta Crystallographica
Section D
STRUCTURAL BIOLOGY

Accepted 17 February 2025

Human dystrophin tandem calponin homology actin-binding domain crystallized in a closed-state conformation

The structure of the N-terminal actin-binding domain of human dystrophin was determined, revealing a closed conformation with the first and second calponin homology domains directly interacting.

Accepted 17 February 2025

The ManifoldEM method for cryo-EM: a step-by-step breakdown accompanied by a modern Python implementation

The ManifoldEM method for conformational heterogeneity analysis in single-particle cryo-EM was first presented nearly a decade ago; however, its accessibility to a wide audience has been limited. Here, we describe a step-by-step breakdown accompanied by a modern Python implementation with increased usability, enhanced performance and improved accessibility to future feature additions.

Accepted 6 February 2025

Expansion of the diversity of dispersin scaffolds

Five GH20-family dispersins were characterized for activity on aryl glycosides and poly-β-1,6-linked N-acetyl-D-glucosamine oligomers and three crystal structures were solved, including two complexes with bound inhibitors.
Journal logoActa Crystallographica Section E
Acta Crystallographica
Section E
CRYSTALLOGRAPHIC COMMUNICATIONS

Accepted 20 February 2025

Crystal structure of 1-amino-3-(4-chloro­phen­yl)-2-cyano-3H-benzo[4,5]thia­zolo[3,2-a]pyridine-4-carboxamide

The tricyclic ring system of the title compound departs from planarity in the region of the sp3 carbon atom. The three-dimensional packing involves four classical hydrogen bonds and one N⋯Cl halogen bond.

Accepted 19 February 2025

Crystal structure, Hirshfeld surface, DFT, mol­ecular docking of 1-[(6-tert-butyl-2-oxo-2H-chromen-4-yl)meth­yl]-4,4-di­methyl­piperidine-2,6-dione and cytotoxic effects on breast cancer (MDA-MB 231), human alveolar basal epithelial (A549) cell lines

The title compound was synthesized by SN2 reaction of bromo­methyl coumarin with 4,4-di­methyl­piperidine-2,6-dione. Its crystal structure was determined and a Hirshfeld surface analysis was performed along with DFT, mol­ecular docking and biological activity studies.

Accepted 11 February 2025

Crystal structure and Hirshfeld surface analyses, inter­molecular inter­action energies and energy frameworks of methyl 6-amino-5-cyano-2-(2-meth­oxy-2-oxoeth­yl)-4-(4-nitro­phen­yl)-4H-pyran-3-carboxyl­ate

The title compound contains pyran and phenyl rings, with the pyran ring in a flattened-boat conformation. In the crystal, inter­molecular N—H⋯N hydrogen bonds link the mol­ecules into centrosymmetric dimers, forming R22(12) ring motifs, which are linked by N—H⋯O hydrogen bonds into a three-dimensional architecture. In addition to van der Waals inter­actions and N—H⋯N and N—H⋯O hydrogen bonds, halogen bonds, tetrel bonds and pnictogen bonds also play an important role in the cohesion of the crystal structure.
Journal logoActa Crystallographica Section F
Acta Crystallographica
Section F
STRUCTURAL BIOLOGY COMMUNICATIONS

Accepted 19 February 2025

High-throughput protein crystallography to empower natural product-based drug discovery

High-throughput protein crystallography is used at the heart of a pipeline to accelerate the discovery of bioactive natural products, by capturing these hits with protein crystals directly from unpurified biota samples.

Accepted 19 February 2025

Crystal structure of S-adenosylme­thionine-dependent mycolic acid synthase UmaA from Mycobacterium tuberculosis

The crystal structure of UmaA from Mycobacterium tuberculosis was solved to 1.95 Å in the space group P3221.

Accepted 16 February 2025

Analysis of Burkholderia pseudomallei IspF in complex with sulfa­pyridine, sulfamonomethoxine, ethoxzolamide and acetazolamide

The co-crystal structures of five sulfonamide ligands bound to the active site of the IspF enzyme from B. psuedomallei are reported. The ligands include the drugs ethoxzolamide, acetazolamide, sulfapyridine and sulfamonomethoxine.

Accepted 13 February 2025

The crystal structures of apo and tryptophan-bound tryptophanyl-tRNA synthetase from Neisseria gonorrhoeae

The crystal structures of tryptophanyl-tRNA synthetase from N. gonorrhoeae were solved in both its apo form and in complex with tryptophan to resolutions of 2.25 and 2.5 Å, respectively. These structures reveal conserved catalytic motifs and conformational changes at the active site upon ligand binding. Additionally, structural comparisons suggest that indolmycin may act as a competitive inhibitor, offering potential for antibiotic development.

Accepted 10 February 2025

The structure of the Gemella haemolysans M26 IgA1 protease trypsin-like domain

The 1.75 Å resolution structure of the G. haemolysans M26 IgA1 protease trypsin-like domain is presented. The structural data suggest that the domain exists in an inactive pro-enzyme-like state when in the context of the full-length protein. This putative pro-enzyme may be activated after being N-terminally excised from the larger M26 enzyme structure through the potential stabilization of its S1 pocket and rearrangement of adjacent surface loops.
Journal logoJournal of Applied Crystallography Journal of Applied
Crystallography

Accepted 16 February 2025

Texture tomography with high angular resolution utilizing sparsity

This article reports non-destructive 3D texture mapping of a wide range of polycrystalline materials using synchrotron X-rays and utilizing the sparsity of the reconstructed texture.

Accepted 14 February 2025

A critical step toward far-field laboratory diffraction contrast tomography in Laue focusing geometry

A far-field laboratory diffraction contrast tomography (FF-LabDCT) technique is established and verified using conventional near-field LabDCT. Future directions to enhance FF-LabDCT as a versatile tool are outlined.

Accepted 13 February 2025

Chemical units of binary solid-solution alloys directly derived from short-range-order parameters

The present work provides a simple method to obtain the chemical unit of a solid-solution alloy directly using Cowley's short-range-order parameters α1 and α2.

Accepted 12 February 2025

If you cannot see it, is it still there?

Flexible segments of protein molecules, while known to be present in a structure, are often not visible in the electron density and are thus omitted in models. Ensemble refinement of completed models allows for visualization and exploration of the available conformation space of such `invisible' regions. Combined with the analysis of different crystal forms, insights into functional aspects of molecular plasticity can be inferred.

Accepted 11 February 2025

Probing the out-of-equilibrium dynamics of driven colloids by X-ray photon correlation spectroscopy

This article presents an application of X-ray photon correlation spectroscopy (XPCS) to probe the out-of-equilibrium dynamics in a driven colloidal system. XPCS enables the investigation of direction-dependent non-equilibrium dynamics and the gradual return of the suspension to equilibrium Brownian behaviour. The influence of such transient non-equilibrium dynamics needs to be taken into consideration when dynamic scattering methods are used for micrometre-range particle sizing.

Accepted 11 February 2025

In situ small-angle X-ray scattering measurement at the Very Small Angle Neutron Scattering Instrument at the China Spallation Neutron Source

A pioneering vertical-geometry small-angle X-ray scattering setup is available at beamline 14, Very Small Angle Neutron Scattering Instrument, at the China Spallation Neutron Source. Small-angle X-ray and neutron scattering can thus be performed at the same time.

Accepted 5 February 2025

SAStutorials.org – online tutorials on small-angle scattering data analysis

We present SAStutorials.org, a website that hosts online tutorials for small-angle scattering data analysis through active learning.

Accepted 3 February 2025

Accepted 2 February 2025

Computing virtual dark-field X-ray microscopy images of complex discrete dislocation structures from large-scale molecular dynamics simulations

A scalable forward model is developed to calculate virtual dark-field X-ray microscopy (DFXM) images of complex dislocation structures predicted by atomistic simulations, demonstrating the potential of DFXM to resolve features from dislocation multiplication and microstructural evolution.

Accepted 1 February 2025

Formalism to image the dynamics of coherent and incoherent phonons with dark-field X-ray microscopy using kinematic diffraction theory

Here, a formalism to relate dark-field X-ray microscopy images to quantitative measurements of coherent and incoherent phonon populations in bulk single crystals is described.

more ...
Journal logoJournal of Synchrotron Radiation Journal of
Synchrotron Radiation

Accepted 14 February 2025

A high-energy Laue X-ray emission spectrometer at the FXE instrument at the European XFEL

A new X-ray spectrometer for high photon energies based on Laue analyzer crystals is presented. Its performance in terms of energy resolution and efficiency is discussed. Niobium Kα and Kβ emission data collected with this Laue spectrometer is given.

Accepted 11 February 2025

The High Energy Diffraction beamline at the Canadian Light Source

The performance of the High Energy beamline of the Brockhouse Sector of the Canadian Light Source is described in terms of flux, bandwidth, divergence, and focus of the beam. Its uses included high energy penetrating diffraction, high pressure diffraction, and pair distribution function studies.

Accepted 8 February 2025

The OÆSE endstation at BESSY II: operando X-ray absorption spectroscopy for energy materials

The OÆSE endstation in EMIL at the BESSY II synchrotron facility in Berlin allows real-time investigation of energy materials through operando X-ray absorption spectroscopy. The possibility to use soft, tender and hard X-rays combined with versatile operando sample environments enables the study of a wide range of energy materials under relevant operation conditions.

Accepted 6 February 2025

The macromolecular crystallography beamlines of the Helmholtz-Zentrum Berlin at the BESSY II storage ring: history, current status and future directions

The history, current state and the future directions of the three MX beamlines BL14.1, BL14.2 and BL14.3 of the Helmholtz-Zentrum Berlin at the BESSY II electron storage ring are described.

Accepted 5 February 2025

Macromolecular crystallography at Elettra: current and future perspectives

The XRD2 beamline at Elettra-Sincrotrone Trieste has been in operation since 2018 and is dedicated to macromolecular crystallography for both academic and industrial research, a role partially fulfilled, before 2018, by XRD1, a general-purpose diffraction beamline. With the upcoming Elettra 2.0 upgrade, based on a 6-bend enhanced achromat lattice, the synchrotron will offer a brighter, more powerful beam to address evolving challenges in crystallography.
IUCrJ
Accepted 18 February 2025

Small but mighty: the power of microcrystals in structural biology

Developments in macromolecular crystallography now allow the use of microcrystals for structural analysis through advanced beamlines and techniques such as microcrystal electron diffraction and room-temperature crystallography. This review addresses methods of matching microcrystal preparation and sample delivery. The use of microcrystals enhances our possibilities in fields such as time-resolved crystallography.

Accepted 17 February 2025

The origin of synthons and supramolecular motifs: beyond atoms and functional groups

This study establishes that hydrogen, halogen and chalcogen bonding intermolecular and non-covalent intramolecular interactions are driven by a face-to-face orientation of electrophilic (charge depleted) and nucleophilic (charge concentrated) regions, being at the origin of the specific geometries found in synthons and supramolecular motifs.

Accepted 13 February 2025

FLEXR-MSA: electron-density map comparisons of sequence-diverse structures

FLEXR-MSA extends the FLEXR suite of tools by enabling electron-density map comparisons of sequence-diverse proteins.

Accepted 4 February 2025

Surface analysis of cannabigerol cocrystals: linking crystal structure to enhanced properties

This study investigates the solid forms of cannabigerol and identifies two new cocrystals, showing significant improvements in physicochemical properties. The findings highlight the strong predictive capability of surface interaction parameters for aqueous dissolution, offering valuable insights for pharmaceutical development.
Journal logoIUCrData
IUCrData

Accepted 18 February 2025

Titanium vanadium nickel, TiV0.08Ni0.92

A single-crystal of the inter­metallic phase TiV0.08Ni0.92 was obtained by the high-temperature sinter­ing of a mixture of nominal composition Ti0.9V0.1Ni. The title compound adopts the CsCl structure type with one site solely occupied by Ti and the other by V and Ni with a ratio of 0.08 (7):0.92 (7).


Follow IUCr Journals
Sign up for e-alerts
Follow IUCr on Twitter
Follow us on facebook
Sign up for RSS feeds