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Figure 10
WHAT_CHECK report of bond distance violations for 3k78 . The last column contains the deviation from known r.m.s. values, expressed in σ levels. Setting atoms to zero occupancies can lead to missing them during model validation and correction. In the case of 3k78 , even a backbone atom distance violation of 15.6σ would go undetected (but the PDB validation reports it in REMARK 500).

Journal logoSTRUCTURAL BIOLOGY
COMMUNICATIONS
ISSN: 2053-230X
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